Oryza sativa japonica (Japanese rice): 9271609
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Entry
9271609 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
9271609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
9271609
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[C] (Qc)
Use1
9271609
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Use1
BORCS6
LMBR1
RASSF8-10_RA
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
9271609
NCBI-ProteinID:
XP_015650004
LinkDB
All DBs
Position
8:join(26825465..26825548,26825829..26825896,26826794..26826866,26827083..26827192,26827270..26827374,26827497..26827596,26827669..26827845)
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AA seq
238 aa
AA seq
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MVLSKVEVNLIRLLEAAPRQQNQTKLVHYVTTARELLEQLGSETTLEGISSVSKAKTSEY
SEKIEALAARLAAPEPENEMPVDENREVESSYEGDKPGSPISLSSGLRRRPIAHNVVGPS
SHERKDRDIGAPIKLDEEAQAHIEKHRKLQEDLTDEMVELARQLKESSLTMHQSVQETEK
ILDSTERAVEHSLASTGRATTRAAEVYSLASKTTCFQWLLIFMMTCMFIMVVLLIRVT
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttagcaaggttgaagtgaacttgataaggctgcttgaggcagctcctcgacag
cagaaccagactaagcttgtccattatgtaaccacagccagggaactgttggagcagcta
ggatcagaaactactctagaagggatatcaagtgtatcaaaagctaagacaagtgagtat
tcagaaaagattgaagcattggctgcccggcttgctgctccagagccagaaaatgaaatg
ccagttgatgagaatagagaggtagaaagctcttatgaaggagataagccaggaagtcca
atatcattatcatcaggattacgtaggagaccaatagctcacaacgttgttggacctagc
agtcatgagagaaaagacagagacattggagcacctattaaattggatgaagaagcacag
gctcatattgagaagcataggaagctgcaagaagatctgactgacgaaatggttgagtta
gcgcgccaactgaaagagagcagtctcaccatgcaccaatctgttcaagaaacagagaag
atccttgattccaccgagagagctgtcgagcatagcttggcgagcactgggcgtgcaacc
acgcgagcagcagaggtatactcgttggcttccaagacgacatgcttccagtggctgctc
atcttcatgatgacctgcatgttcattatggtggttctgctcatccgggtcacctaa
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