Oryza sativa japonica (Japanese rice): 9271783
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Entry
9271783 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
9271783
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9271783
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9271783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
Rtf2
zf-C3HC4_2
zf-RING_5
zf-UDP
Sds3
zf-rbx1
WD40_2
zf-RING_4
DUF5817
zf-RING_16
zf_RING_Vps8
PknG_rubred
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
9271783
NCBI-ProteinID:
XP_015628612
LinkDB
All DBs
Position
3:join(495853..496166,496339..496417,496520..496609,496688..496732,496820..496888,497025..497078,497155..497253,498029..498139,498244..498377,498457..498496,498809..498868,498953..499134,499309..499804)
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AA seq
590 aa
AA seq
DB search
MASRPRGRRLPPPHPPLIQEILDDDLFDVEVNYSDEEEEEEEEESDEEESESEDNEPEEV
VPGQESIGEGCGPAIQARVSGAAAEKNACPVCMEAWASQGAHRICCIPCGHIYGRSCLER
WLRHKGNTSATCPQCGKRFRPKDITNLYAPEVAVPNNDLEKEVLYLRGKAESLGETVMKH
EKLIEEMNERLVELTSAQKRQILSEQRLMNVGSSKRQKLAEHLAGTTYLEPPTSVTADFN
SSNSCDFVFQKEFFMDGLRVMAIDAFNQTILASGKAPGIGQEHVLYKFSMVSHHEARNIQ
LPLDTKTVRDICILPSGSAIFTSLGRKLSSFSMTADRVVLQCDLPCPGWSCSADESSRQI
CAGLQNGNLIIFDIRQTSRPLHSMVGLSTHPVHTLHTVIDNNGSRKFLSASSIGPCMWDT
DGIQGRPKLLLGTDNQRVCISLACAPSSSDLLVASFRPKVETSEDATASQVYLSQTPTPS
GGGKLGYHSFIRRAGNSSSFTEDRTCSTLVSEIRMSKSAIIPYGNNQHLFAYGDESLRGV
RTWRLPSFEMHSDLSSLQQPVLDLRYAESSSGGRYLGYLSTEKLQVFRIR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcccccgtggaaggcgccttcctcctcctcatccgccgctcatccaggag
atcctcgacgacgacctcttcgatgtagaggttaactacagcgacgaggaagaagaggag
gaggaggaggaaagcgatgaagaggagtcggagtcggaggacaacgaaccggaggaggtg
gtgccggggcaggagagtatcggggagggatgcgggccggccatacaagctagggtttcc
ggcgccgccgcggagaagaacgcctgccccgtttgtatggaggcctgggcctcccaaggc
gctcatcgaatctgttgtattccttgtgggcatatctatggaagatcttgcctggagagg
tggttgaggcacaagggcaacactagcgcaacctgccctcagtgtgggaaaaggttcaga
cctaaggacattaccaatctctatgcaccagaggttgcagttccaaataatgatctggaa
aaggaagtattgtatctaagggggaaagctgaatcccttggggaaacggtgatgaaacat
gagaaattgatagaggagatgaatgagagattggttgagttgacaagtgctcagaagagg
cagattctgtcagagcagagattaatgaacgttggtagctcaaagagacagaaattggca
gagcatttggctggaactacatatctggagccaccaacctcagtcacagcagattttaac
tctagcaacagttgcgattttgtctttcagaaagaattcttcatggatggacttcgagtc
atggccatagatgcatttaaccaaacaattcttgcttctggaaaagcaccaggcatagga
caagaacatgttctttataagtttagcatggtttcccatcacgaagctcggaatatacaa
cttcctctggatactaaaactgtcagggacatatgtatcttacctagtggctctgctatt
tttacatcactgggcaggaaactatcgtcatttagcatgacggctgaccgtgtcgttctt
cagtgtgatttgccgtgtcctggctggtcatgttctgcggatgaatcttcgcgtcagatt
tgtgctggattgcagaatggcaatcttatcatctttgatatccgtcaaacctcaagaccg
ttgcattctatggtgggtttatctacacacccggttcatactctccatacggtcattgat
aacaacggttctagaaagtttctctctgcctcttctataggcccctgcatgtgggatact
gatggtattcaaggcaggccaaagttgctattggggacagataatcaacgggtgtgcatt
tctcttgcatgtgccccttcatcaagtgatctattggtagcttcctttcggccaaaggtt
gaaacgtccgaggatgctacagcatctcaagtgtatctatcacaaacaccaacaccctct
ggtggagggaaattagggtatcattccttcatcaggagggcggggaactcgtcatccttc
accgaagataggacatgcagcacacttgtgagcgaaattcgcatgtcgaaatccgcaatt
ataccttatggaaacaaccaacatctgtttgcttatggagatgagtcgctgcgtggggtc
cggacctggcgactaccatcgtttgagatgcattctgatctcagctccctccagcaaccg
gtcctggatctaaggtatgcagaaagttcatccggagggaggtatctcgggtacctgagc
acggaaaagttgcaggttttcagaattaggtag
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