Oryza sativa japonica (Japanese rice): 9271949
Help
Entry
9271949 CDS
T01015
Symbol
AMY1.6, AMY3B, OsJ_29630, RAmy3B
Name
(RefSeq) alpha-amylase isozyme 3B precursor
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00500
Starch and sucrose metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
9271949 (AMY1.6)
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
9271949 (AMY1.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
9271949
NCBI-ProteinID:
NP_001390734
UniProt:
A0A1B0SZS0
LinkDB
All DBs
Position
9:join(21678773..21678865,21678942..21679880,21679980..21680264)
Genome browser
AA seq
438 aa
AA seq
DB search
MAKRIASMSSLLLIALLCLSSHLAQAQVLFQGFNWESWKKQGGWYNFLHGHVDDIAATGV
THVWLPPPSHSVAPQGYMPGRLYDLDASKYGTGAELRSLIAAFHSKGIKCVADIVINHRC
ADYKDSRGIYCIFEGGTPDSRLDWGPDMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNT
RVQTELSDWLNWLKSDVGFDGWRLDFAKGYSAAVAKTYVDNTDPSFVVAEIWSNMRYDGN
GEPSWNQDGDRQELVNWAQAVGGPASAFDFTTKGELQAAVQGELWRMKDGNGKAPGMIGW
LPEKAVTFIDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNLKQEIST
LAAVRSRNEIHPGSKLKILAAEGDVYVAMIDDKVITKIGTRYDVGNLIPSDFHVVAHGNN
YCIWEKSGLRVPAGRHHY
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcatagcctcaatgagcagcctcctccttatcgccttgctctgtctgagc
tctcacttggcccaagcccaggtcctcttccaggggttcaactgggagtcgtggaagaag
cagggcgggtggtacaacttcctccatggccacgtcgacgacatcgccgcgaccggtgtc
acgcacgtctggctcccaccgccgtcgcactccgtcgccccgcagggatacatgccgggc
cggctctacgacctggacgcttccaagtacggcacgggggcagagctcaggtcgctgatc
gccgccttccacagcaaaggcatcaagtgcgtcgccgacatcgtcatcaaccaccggtgc
gcggattacaaggatagccgtggcatctactgcattttcgagggtggcacgccggacagc
cgcctcgactggggccccgacatgatctgcagcgacgacacgcagtactccaacggccgc
ggtcaccgcgacaccggcgcagacttcggcgcggcgcccgacatcgaccacctcaacacg
cgtgtgcagacagagctgtccgactggctcaattggctcaagtccgacgtcggcttcgac
ggctggcgcctcgacttcgccaagggatactcggcggccgtcgccaagacgtacgtcgac
aacaccgacccgtccttcgtcgtcgccgagatatggagcaacatgcgttacgacggcaac
ggtgagccgtcgtggaaccaggacggtgaccggcaggagctggtgaactgggcgcaggcc
gtcggtggccctgcgtcagcgttcgacttcacgaccaagggcgagctgcaggcggcggtg
caaggtgagctgtggcggatgaaggacggcaacggcaaggcgccggggatgattggctgg
ctgccagagaaggccgtcaccttcatcgacaaccatgacactggctccacacagaactca
tggccgttcccctccgacaaggtcatgcagggctacgcctacatcctcacacaccctgga
gtaccctgcattttctacgaccatgtatttgactggaacctgaagcaggagatcagcaca
ttagctgcagtgagatcaagaaatgagattcatcccgggagcaagctgaaaatccttgct
gctgagggagacgtctatgtcgccatgatcgatgataaggtcataacaaagattgggaca
cggtatgacgtgggcaacttaatcccgtcagacttccatgtcgttgctcacggcaacaat
tactgcatttgggaaaagagcggtctcagagttcctgcagggcggcaccactattag
DBGET
integrated database retrieval system
