Oryza sativa japonica (Japanese rice) (RefSeq): 9272440
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Entry
9272440 CDS
T01015
Name
(RefSeq) phospholipase D zeta 1 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00564
Glycerophospholipid metabolism
osa00565
Ether lipid metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
9272440
00565 Ether lipid metabolism
9272440
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9272440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
9272440
Enzymes [BR:
osa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
9272440
Membrane trafficking [BR:
osa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
9272440
Endosome - Golgi transport
Others
Others
9272440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
PH_9
PH_8
Motif
Other DBs
NCBI-GeneID:
9272440
NCBI-ProteinID:
XP_015622123
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All DBs
Position
1:complement(11625274..11637343)
Genome browser
AA seq
1127 aa
AA seq
DB search
MSGGRSAAREGEEAEEEEVEEYGGGYVRMPQEPEGEAAAAGAGSFLRLPESAGAFDELPR
ARIVGVSRPDAGDITPMLLSYTVEVQYKQFRWLLYKKASQVLYLHFALKRRAFLEEFHEK
QEQVKEWLQNLGIGEHIPVVHDDDEADDVHVPSQHDEHSVKNRNVPSSAVLPVIRPALGR
QQSVSDRAKVAMQEYLNHFLGNMEIVNSREVCKFLEVSLLSFLPEYGPKLKEDYVTVGHL
PKIDEGSSNICCLCGCFSFCNSSWQKVWAVLKPGFLALLQDPFDPKLLDIVIFDVSPHMD
RNGEGQSTLAREIKEHNPLHFAFEVSSGGRTIKLRTRSSAKVKDWVSAINTARRPPEGWS
HPHRFGSFAPPRGLTEDGSVVQWFLDGQAAFNAIASSIEEAKSEIFITDWWLCPELYLRR
PFHHHESSRLDILLESRAKQGVQIYILLYKEVSLALKINSMYSKQRLLNIHENVKVLRYP
DHFSTGIYLWSHHEKIVIVDNQVCYIGGLDLCFGRYDTPEHKVVDVPPSIWPGKDYYNPR
ESEPNSWEDTMKDELDRTKYPRMPWHDVQCALYGPACRDIARHFVQRWNYAKRNKAPNEQ
AIPLLMPQHHMVIPHYMGKIKESNEEVSKQTHVEDIKGQKLSSLKAPASCQDIPLLLPHE
PDHQASNNGELGLNGLDNNHGHSDHPNKTHWKQPIPNRKAKQDTSLQDLQMKGFVDNLGT
PDVSSVIGHYDTSKQNVHHMDNEWWETQERGDQVDYVLDIGEVGPRATCCCQVVRSVGPW
SAGTTQIEGSIHNAYFSLIEKAEHFVYIENQFFISGLSGDDTIKNRVLEALYRRILRAEK
EKRCFRVIIVIPLLPGFQGGIDDGGAASVRAIMHWQYRTICRGPNSILKNLYDVVGSKAH
DYISFYGLRAHGRLGDGGPLVTNQIYVHSKLMIIDDRMTLIGSANINDRSLLGSRDSEIG
MIIEDKEVVSSIMDGRHWEAGKFSLSLRLSLWAEHLGLHPGEVSQIMDPVDDLTYNNIWM
GTAKANTKIYQNVFSCVPNDHIHSRSQFRQGFAHRKEKIGHTTIDLGVAVEITETHKDGD
LAGTDPMEKLQAVRGHLVSFPLEFMCQEDLRPFFGESEYYTSPQVFH
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggggcggtcggctgcgcgggagggagaggaggcggaggaggaggaggtggag
gagtacggagggggatacgtgaggatgccgcaggagccggagggggaggcggcggctgcg
ggggcggggtcgttcctccggcttcccgagtcggcgggggcgttcgacgagctgccgcgg
gcgaggatcgtcggggtgtcgcggcccgacgccggggacatcacgcccatgctgctctcc
tacaccgtcgaggtccagtacaagcagtttaggtggcttctatataagaaggcatcacag
gttctatatctacattttgcgttgaaaaggcgtgcatttcttgaggaattccatgagaaa
caggaacaggtcaaggaatggcttcaaaatttgggaattggggagcatattccagttgtg
catgatgatgatgaagcggatgacgtgcatgttccttcacaacatgatgaacactctgtc
aaaaatagaaatgttccctctagtgctgtcttgcctgtcattcgtccagcccttggtcgt
cagcaatctgtttctgatcgtgcaaaggttgccatgcaagaatatctgaaccatttcttg
ggaaacatggaaattgtcaactcaagagaggtttgtaaatttttggaagtctctctgtta
tcatttctaccagaatatgggcctaagctaaaggaagattatgttacagttggacactta
ccaaaaattgacgaaggtagcagtaacatatgttgtttgtgtggatgttttagtttctgc
aacagtagctggcagaaggtttgggctgtactgaagccaggatttttagctttgctccaa
gatccatttgatccaaagcttttggatatagttatctttgatgtatcacctcacatggat
agaaatggagaaggccaaagcactctagcaagagagattaaggaacataatccattgcac
tttgcatttgaggtgtcttctggggggcggacaataaaattgagaacaagaagttctgct
aaagtgaaagattgggtatctgcaataaatactgctcgacgacccccagagggttggtct
cacccacaccgttttggttcattcgcaccacctaggggtttgactgaagatggtagcgtc
gtacaatggtttcttgatgggcaagctgcgtttaatgctattgcttcttcaattgaggaa
gccaaatcggagatattcattactgattggtggctgtgcccagaactgtaccttcgacgc
cctttccaccatcatgaatcctctagacttgatattcttctagaatcaagggcaaagcaa
ggtgtacagatctatattcttttgtacaaggaagtttctcttgcattgaaaattaacagc
atgtacagcaaacagaggcttttaaacattcatgagaatgttaaagttctgcgataccct
gatcatttctcaactggcatatacttatggtcacatcatgagaaaatcgttattgttgat
aatcaagtatgctatattggaggccttgatttatgctttggtcgttatgatactcctgag
cataaagttgtggatgttcctccttcaatatggccaggaaaagattactacaatcctagg
gaatctgagccaaattcttgggaggacaccatgaaagatgagcttgatcgtactaaatat
cctcgcatgccctggcatgatgttcagtgtgctctttatggtcctgcatgccgagacata
gcaaggcattttgttcagcgctggaactatgcaaagaggaacaaagcaccaaatgagcaa
gcaattcccttattgatgcctcaacatcacatggtaattccccattacatgggtaaaatc
aaagaatcaaatgaggaagtaagtaaacagactcatgttgaggatattaaaggccagaag
ttaagctccttgaaagcaccagcatcatgccaggacattccattgcttttgcctcatgag
cctgatcaccaggcatcaaataatggagagttaggtctgaatggtttagataacaatcat
ggtcactcagatcacccaaataaaacccattggaaacagcccattcccaaccggaaggcc
aagcaagatacttctcttcaggatttacagatgaaaggttttgtggacaatcttggtacc
ccagatgtttcatcagtaattggacattatgacacctcaaaacaaaatgtgcatcacatg
gataacgaatggtgggagacacaggagcgaggagaccaggtcgattatgtgcttgatatt
ggagaagttggtccccgagcaacttgttgctgtcaggttgttcgaagtgttggtccgtgg
tcagcaggaacaactcaaattgaagggagcatccacaatgcctatttttctctcatcgaa
aaagcagaacattttgtgtacattgagaatcagtttttcatatcaggtctttcaggagat
gacacaataaaaaaccgtgtattagaagcattatacaggcgtatacttagagcagaaaag
gagaaaaggtgcttccgggttataattgtcataccgcttttacctggatttcagggaggc
attgatgacggtggagcagcatctgttagagcaattatgcactggcaatacaggaccatt
tgtagagggcctaattcaatacttaagaatctttatgatgtggttggttccaaagcccat
gattatatctccttttatgggctcagggcacacggcagactaggtgatggtggtcctttg
gtcaccaatcagatatatgtgcacagtaagttgatgatcattgatgaccggatgacactg
attggatcagctaacataaatgacagaagtttgcttggatcaagggattctgagattggt
atgattattgaagataaagaggttgtcagttcaattatggatggaagacattgggaagca
gggaagttctctcttagcctacgactttctctatgggcagaacaccttggccttcatcca
ggagaggttagtcaaattatggatcctgtggacgatttgacttataacaacatctggatg
ggcactgctaaggcaaacaccaagatataccaaaatgtcttctcgtgtgttcccaatgat
cacatccattctaggtcccaatttaggcaaggatttgctcaccggaaggagaaaatcggc
cacacaaccattgacctgggtgttgctgtagagataacagaaactcacaaggatggggat
ctggcaggcaccgatcctatggaaaaattacaggccgttaggggccatctcgtttccttc
cctttggagttcatgtgccaagaggacttgagaccattcttcggcgaaagcgaatattat
acgtccccgcaagttttccattag
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