Oryza sativa japonica (Japanese rice): 9272621
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Entry
9272621 CDS
T01015
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
9272621
Transcription factors [BR:
osa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
9272621
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Ortholog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
9272621
NCBI-ProteinID:
XP_015612461
UniProt:
B7ERE7
C7J6G0
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All DBs
Position
9:complement(join(26509375..26510416,26513770..26514166,26514261..26514429))
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AA seq
535 aa
AA seq
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MAAASSAPFFGLGDTQMPPPQNPTNPALHHHPNPSPAPVAAAAPAPKKKRNQPGNPNPDA
EVIALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCP
EPSCVHHDPSRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKTCGTREYR
CDCGTLFSRRDSFITHRAFCDALAQENARMPPIGAGVYGGAGNMTLGLTGMAAPQLPAGF
PDQAGQPSASAGDVLRLGGGSNGASQFDHLMASSSGSSMFRSQGSSSSSFYLANGAAHHA
PAQDFGPEDGQSQAGQGSLLHGKPAAFHDLMQLPVQHQQSGNGNLLNLGFFSGSNGGVDQ
FNGGAGNGGQGSIVTSSGLAGNHGGGGGGFPSLYNSSEPAGTLPQMSATALLQKAAQMGA
TTSSYNAGGAGGASSLLRGASSHGISVGEGPANERSSYQNLIMGSMASGGGGAGFAGSFS
GASGFGGAVDDGKLSTRDFLGVGVVQGISGSAAMGPPRHGAAGLHVGSLDPANMN
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcctcgtccgcacccttctttgggctcggcgacacgcagatgccgccgccg
cagaatcccaccaatccagccctccaccaccaccccaacccctcccccgctcccgtcgcc
gccgccgcgcccgcgccgaagaagaagaggaaccagcctggaaacccaaatccagatgcg
gaggtgatagcgctgtcgccgcggacgctgatggcgaccaacaggttcgtgtgcgaggtg
tgcaacaaggggttccagcgggagcagaacctgcagctgcaccggcgagggcacaacctg
ccgtggaagctgaagcagaagaaccccaaggaggctcgccggcgcgtgtacctgtgcccg
gagccgtcgtgcgtccaccacgacccgtcgcgggccctcggcgacctcaccgggatcaag
aagcactactgccgcaagcacggcgagaagaagtggcgctgcgacaagtgctccaagcgc
tacgccgtgcagtccgactggaaggcccactccaagacctgcggcacccgcgagtaccgc
tgcgactgcggcaccctcttctccaggagggacagcttcatcacccaccgcgccttctgc
gacgcgctggcgcaggagaacgcgcgcatgccgcccatcggcgccggcgtatacggcggc
gccggcaacatgacacttgggctcaccggcatggccgccccgcaacttcccgccggcttc
cctgatcaggccggccagccgtcggcgtcggccggcgatgtcctccgcctcggcggcggc
agcaatggcgcctctcagtttgatcacctcatggcctcgtcgtcgggctcctccatgttc
cgctcgcagggatcgtcgtcctcctcgttctacctcgccaatggcgccgcccatcatgct
cccgctcaggacttcggcccggaggacggccagtctcaggccggccagggctcgctgctc
cacggcaagccggcggcgttccatgacctgatgcagctccccgtgcagcaccagcaaagc
ggcaatggtaacctcctcaaccttggcttcttctccggcagcaatggcggcgtcgaccag
ttcaacggcggcgctggaaacggcgggcagggcagcatcgttacttctagcggcctcgcc
ggcaaccacggcggcggcggcggcggcttcccttctctgtacaactcgtccgaaccggcc
ggtacactgccgcagatgtcggcgacggcgctcttgcagaaggctgcccagatgggtgca
acgacgagcagctacaacgccggcggcgccggtggcgcgagctcgctgctccgtggagct
agctcccacgggatcagcgtcggtgaagggccggccaacgagaggtcgtcgtaccagaat
ctcatcatgggctccatggcgagcggcggcggtggcgcgggtttcgccggtagcttctcc
ggcgcgtctggattcggtggcgccgtcgacgacggcaagctgagcacgagggacttcctc
ggcgtcggcgtcgtccagggcatcagcggctcggcggcaatggggccgccgcgccatggc
gcggccggcctccacgtcggctcactggacccggcaaacatgaactga
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