KEGG   Oceanicoccus sagamiensis: BST96_15820
Entry
BST96_15820       CDS       T04832                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
osg  Oceanicoccus sagamiensis
Pathway
osg03030  DNA replication
osg03410  Base excision repair
osg03420  Nucleotide excision repair
osg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:osg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BST96_15820
   03410 Base excision repair
    BST96_15820
   03420 Nucleotide excision repair
    BST96_15820
   03430 Mismatch repair
    BST96_15820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osg03032]
    BST96_15820
   03400 DNA repair and recombination proteins [BR:osg03400]
    BST96_15820
Enzymes [BR:osg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BST96_15820
DNA replication proteins [BR:osg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BST96_15820
DNA repair and recombination proteins [BR:osg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BST96_15820
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BST96_15820
   MMR (mismatch excision repair)
    DNA ligase
     BST96_15820
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BST96_15820
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia HHH DNA_ligase_ZBD PTCB-BRCT
Other DBs
NCBI-ProteinID: ARN75450
UniProt: A0A1X9NBP3
LinkDB
Position
3439508..3441853
AA seq 781 aa
MPLPAAISQQLDELRAVINQHNYRYYAMDDPSVPDAEYDRLMRQLQAIEADYPEAVNPES
PTQRVGAEPLEGFQQIQHEVPMLSLDNVFNSEELLDFDRRITERLGSDTPFRLVCEPKLD
GAAVSLLYRHGKLERGATRGDGAVGEDITHNVRTIKSIPLRLMGEGYPDVIEVRGEIYMP
KKGFDELNERARANDEKTFVNPRNAAAGSLRMLDARITAERPLEMCCYSVGLVEGGDLPA
GHYAILEQLQQWGFRINSEMRVVDNVQGCLEYHDYLLAKRSSLPYDIDGIVYKVDDLELQ
QELGFTAKGPRWAIAHKFPAEEEITKLLDVDFQVGRTGAITPVARLEPVFVGGVTVSNAT
LHNRDEIERLGVKINDTVVVRRAGDVIPQVAKVVLERRGDDAIDIQFPERCPVCDSDVER
VKIVKYSKGSRTEEEGAAYRCVGRLVCQAQLNQAIIHYASRKALDIDGLGEKIVEQLVAE
GLVKSPADLYKLQFDNLQELEGFAELSAKNLLAAIADRKSVPLSKLIFALGIPDVGEETA
KVLAEVFGSIDKIRLALPQLLVNLPDIGREVANEITGFFADSHNAAVIDDLIAVGVNASD
GGEISPKYQGAITMAECIAGFNIPGVGPTTAASLAKHFNDLALLLDASVASLAAIDKVSA
KAAESVVSFFADHNNRDKAQQLEQQLLDFAMHWSCERQQVDALPLEGLIYVVTGTLETMG
RSEAKARLQQLGAKVAGSVSKKTDCVVAGPGAGSKLTKAQDLGVDVIDEAALIVLLQQHG
L
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgcctttacctgcagccatcagccagcaactcgacgagttgcgtgccgtgattaatcag
cataactaccgttattacgcgatggatgatccttccgtgccggatgcggaatatgatcgc
ctgatgcgccaactacaggctatagaggcggactatcctgaggccgttaatcccgagtca
cccacgcagcgggtcggagctgaaccgctggagggttttcagcagattcagcatgaagtt
cccatgttgtcactggataacgtgtttaacagcgaagagttattggattttgaccggcgt
atcactgaacgtctggggagtgataccccctttcggttggtttgtgagcccaaattagac
ggggctgccgttagcctgctctataggcatggtaaattggaacggggtgcaacccgtggt
gatggggcagtgggtgaggatattacccataatgtcagaaccattaaatccataccgcta
cgcttaatgggcgagggctaccccgatgtgattgaggtgcgcggcgaaatctatatgccg
aaaaaaggctttgatgagctgaatgaacgcgcccgtgccaatgacgaaaaaacctttgta
aacccacgcaatgcagctgcgggtagcctgcgtatgttggatgcgcgaattaccgccgag
cggcctttggaaatgtgttgctatagtgttggcttggttgaagggggggatttacccgct
ggccattacgctattcttgagcagttacagcagtggggttttcgcattaatagcgaaatg
cgtgttgttgataatgttcagggctgccttgagtaccatgattatctgttggccaagcgc
agcagcttaccctatgacatcgatggtattgtttacaaagtcgacgatctggaattacag
caagaactgggctttaccgccaaaggtccgcgctgggctatcgctcataaatttcctgcc
gaagaagaaataaccaagctattagatgtggattttcaagtagggcgaacgggagcgatt
accccggttgcgcgtttagagccggtttttgtcggtggcgttaccgttagcaatgcgacc
ttgcataatcgtgatgaaattgagcggctgggggtaaagattaacgataccgttgtggta
cgccgcgccggtgatgttattccgcaggtggccaaggtggtattggagcgtcggggtgac
gatgccatagatattcaattcccggagcgttgcccggtctgtgactccgatgttgagcgc
gttaaaattgttaaatacagcaagggtagccgcactgaagaagagggcgcggcctatcgg
tgtgtcgggcgtctggtctgtcaggcgcaattaaaccaggcgattattcactatgcctct
cgcaaggcgttggatatagatggtctgggcgaaaaaattgttgagcagttggtggccgaa
ggtttggttaaaagcccggcggacttatataaacttcagttcgacaatttgcaagagctg
gaaggttttgccgagctgtcagcaaaaaacttgctggcggcgattgctgatcgtaagtcc
gtgcccttaagcaagctgatttttgctctgggaatacccgatgtgggtgaagagactgcc
aaagtactggcagaggtctttggcagtatcgataaaattcgtctcgctttaccgcagttg
ttagttaatttgccagatattggccgcgaagtggcgaatgaaattaccggtttttttgcc
gattcacataatgccgcggtgatcgatgatctgattgcggtcggtgttaacgccagtgat
gggggtgaaataagccctaaatatcagggggcaataacgatggcagagtgtattgccggt
tttaatattccgggggtagggccaaccactgcggcgtcactggcaaagcattttaacgat
ttagctttattgttagatgcctcggttgcatcccttgccgctattgataaggtgagtgcc
aaagcggcggagagcgttgtcagcttttttgctgatcataataaccgcgataaagcacag
cagctggaacagcaattactcgactttgcgatgcactggagctgtgagcgccagcaagtg
gacgccttgcctctagaggggcttatctacgtggtgacaggaacactggaaaccatgggg
cgcagtgaagccaaagccaggctccagcaattaggcgccaaggtagcgggcagtgtctcc
aaaaaaaccgattgtgtggttgcaggcccaggtgccggttctaaattaacgaaagctcag
gacttgggtgttgatgtgattgatgaggcggctttaatcgttttattgcagcaacacggc
ctttaa

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