Octopus sinensis (East Asian common octopus): 115214435
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Entry
115214435 CDS
T07665
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osn03041
]
115214435
03012 Translation factors [BR:
osn03012
]
115214435
Enzymes [BR:
osn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115214435
5.6.2.6 RNA 3'-5' helicase
115214435
Spliceosome [BR:
osn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115214435
Translation factors [BR:
osn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115214435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
ATPase
AAA_19
Dicer_dimer
nSTAND3
AAA_16
Sigma54_activat
AAA_23
AAA_22
Motif
Other DBs
NCBI-GeneID:
115214435
NCBI-ProteinID:
XP_029639494
UniProt:
A0A6P7SMI1
LinkDB
All DBs
Position
LG1:164370226..164427764
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AA seq
1227 aa
AA seq
DB search
MGDIKQFLYAWCGKQKVTPVYEFNTGGPKHKPRFKCEIRVDSFDYIGVGNSTNKKDSQAN
AARDFVQFLVRQGQVQQSEVPTLTVGMGAGTAETVSGNDTPADDMTDSGISSGGSFPGLD
ANRDIPAYQRGPPMSYLDRLAEKRKLEESEDLDLNASIHGNWTLENAKSRLHQFLQQNKI
QADYKYSMIGPDHNRSFIAEMKIYVKSIGKHVSSREHGSNKQVASKSCALSLVRQLYHMN
VIEAYTGLKKKKDADKIPPFEVSICPELETSLDEALNAWNIEPIQVPAEISPEPFSLVTH
TQLDEFVPAPKRPQPGVVSWCPPQPNWNPWTNCNIDEGPLAHASMEQISQDVYRSLEEQR
ANDRDLQAMLHDRSKLPINQSRDHIVQVIKSSPVVLIRGETGCGKTTQVPQFILDGMVAE
GKGADCNIIVTQPRRISAVSIAERVAMERNENLGLSTGYSVRFESVLPRPYAAILYCTLG
TLLRRLENGLRGVSHVIVDEIHERDINTDFLLVLLRDMLATYSELRVVLMSATVDVTLFC
EYFGNCRVVEVYGRVFPVQDYFLEDCIQMTNFVPPPSDRKKKKEKDEDGEDGDKEENCNL
LISGDYSEATRRAMAMLNEKEMSFELIEALLQYIKSLNIPGAVLIFLPGWNLIFALQKHL
EMSADFGSSRYRILPLHSQIPREDQKKVFESVPCGITKIILSTNIAETSVTINDVVYVID
CCKAKMKLFTSHNNMTNYATLWASKTNLEQRRGRAGRVRPGFCFHLCSRARYERLEQHTT
PEIFRTPLHELALAIKLLRLGSIGLFLAKAVEPPPIDAVIEAEALLKEMRALDSNDELTP
LGRILARLPIEPRLGKMMIYGCLFYCGDAVCTVAASTTFPEPFITHDRKRLGWIHKNLAG
TRCSDHVALLNAFQLWEDARMSGEDSEACFCDNKSLSMPTLRMTCEAKNQLRDILTNTGF
PEECMLPKVYNYTGPDGNLDIVTTLLCMGLYPNVCYHKEKRKVLTTESKHALVHKSSVNC
SNFEIHFPSPYFIFGEKIRTRAVSCKQMTMVTPIQLLLFASRSVTFHEELVILDEWINLK
MNPNIAAKIVALRPAMEALIVRATQNPAVINQPGPQESSLMSAVRFLSQPNAGRFGLADQ
TENGPPNKFARFGGGGRGFRNFSRGGSFEGGSRGYGGGYGSNYRGGMSTGFTNNWRGGGG
YRGGYNRGGGYNRGGGYQRSGGGGGYY
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggagatatcaagcagtttttatatgcttggtgtggtaaacagaaggtcactcctgtt
tacgaattcaacactggtggaccgaaacataaacctcggttcaaatgtgaaattcgggtt
gatagtttcgactacattggtgttggtaattcaacaaacaaaaaagattcccaagcaaat
gctgctagggattttgtccagttcttagttcggcagggacaggtccaacaatcagaagtg
cctactttaactgttggcatgggtgctgggacagcagaaactgtgtctggaaatgacaca
cctgcagatgatatgactgattctggaatatcttctggtggctctttccctggattagac
gctaacagagacattcctgcttatcaaaggggcccaccaatgagttatttggaccgactt
gcagaaaaaaggaaattggaagaatcagaagatcttgacttgaatgcgagtattcacggc
aactggacactggaaaatgctaaaagcagactccatcaatttctgcagcaaaataaaata
caagctgattataaatattctatgataggtccagatcataatcggagcttcattgccgag
atgaaaatctatgtcaaatctattgggaagcatgtatcatcacgagagcatggttcaaat
aaacaagtggcttccaaatcatgtgctttgtctttggtgcgccaactctatcacatgaat
gttattgaagcttacaccggtttgaagaaaaagaaagatgctgataagataccaccattt
gaagtttccatttgtcctgaattggaaactagtctggatgaagctttgaatgcatggaat
attgagcctattcaagtacctgctgaaatttccccggagccattctcactagtaactcat
actcaactggatgaatttgttcctgcacctaaacgtcctcaaccaggtgtggtttcttgg
tgtccaccacaacccaactggaacccttggacaaattgtaacatcgacgaaggtcctttg
gctcatgcctcaatggaacaaatcagtcaggatgtgtaccggtcactagaagaacagaga
gccaatgatagagatcttcaggctatgctccatgatcgaagcaagttacctatcaatcaa
tctagagatcatattgtacaagttattaaatcttccccggttgttctcataagaggagaa
actggatgcggtaaaacaacacaggtccctcagtttattttggacggcatggttgcagaa
ggcaagggtgctgactgtaatataattgtgactcagcctagaagaatcagtgccgtatcc
atcgccgaaagggtcgctatggaaaggaatgagaacttggggctgagtactggctacagt
gtcagatttgaaagtgttctacctcggccctatgcggctattctctattgtacattagga
acattattacgacgattagagaatggcttgcgtggtgtttctcatgtaattgttgatgaa
atccatgaaagagacataaatactgacttcttgttggtgttactccgggatatgttagca
acttatagtgaactgcgtgttgtacttatgtctgctactgtagatgtaactctgttctgt
gaatacttcggcaattgtagagtggtggaagtttatggccgagtttttccagttcaagat
tatttcttagaggattgtattcaaatgacaaattttgtgccaccaccatcagatagaaag
aaaaagaaagagaaagatgaggatggagaagatggtgacaaagaggaaaattgcaatttg
ctaatatctggtgattactcagaagccactcgaagagcaatggctatgttaaatgagaaa
gaaatgtcatttgaattaattgaagcattactacaatacatcaaaagtctgaatattccc
ggtgctgtcttaattttcttacctggctggaatctcatctttgctctacagaaacacctg
gagatgtcggctgactttggctcctcaaggtatcgaattcttcctttacattcacaaata
ccccgagaagaccaaaagaaagtgtttgaaagcgtaccatgtggaattacgaagattatt
ctctcaaccaatattgctgagaccagtgtgaccatcaatgatgtcgtctatgtcattgac
tgttgcaaagctaaaatgaaactcttcacttcacacaacaacatgactaactatgctact
ttatgggcttccaaaactaatttggaacaacgccgtgggcgtgctggacgtgttcggcct
ggattctgctttcatctttgtagcagagccaggtatgaaagactagaacaacatacaaca
cctgaaatattccgcacaccacttcatgaattagcattggctatcaaactgctaaggctc
gggtctattggtttatttttggccaaagctgttgagccacctcctattgatgctgttatt
gaagctgaagccctattaaaagaaatgcgtgctcttgattctaatgatgaattaactcct
ttgggccgtattcttgccagacttcctattgaacctcgcttaggaaaaatgatgatttat
ggttgcctgttttactgtggagatgctgtgtgtacagttgctgctagcactacgtttcca
gaaccatttataacacatgaccggaagcgccttggctggatacataaaaatctggctggt
acaagatgcagtgatcatgtagccttattgaatgcatttcaactttgggaagatgctcgt
atgtctggtgaagatagtgaagcttgcttttgtgacaataaatctctttcaatgccaaca
ttgcgaatgacatgtgaagcaaagaatcagttaagagatattcttaccaatactggtttc
ccagaagaatgtatgttgcccaaagtatacaattacactggacccgatggtaatttagat
attgtgacaacgctcttatgtatgggtctttatcctaatgtttgctatcataaagaaaag
cgtaaggtactcactactgaaagcaagcatgccttagttcataaatcatcagtgaactgc
agtaattttgaaattcattttccttctccttatttcatatttggggaaaagatacgtact
cgtgctgtgtcttgcaaacaaatgacaatggtaacacccatccagttactgctctttgct
tctcgctcagtgacatttcatgaagaattggttattcttgatgaatggattaatttaaaa
atgaaccctaatattgctgccaaaattgtcgctctccgtccggccatggaagccctaata
gtgcgagccacccagaacccagctgtaattaaccagccaggaccccaagagtcttcgctg
atgagtgctgtgagatttttatctcaaccaaatgctggtcgctttggacttgctgaccag
accgaaaatggacccccaaacaaatttgctcggttcggtggaggtgggagaggatttcgg
aacttcagccgagggggcagctttgagggtgggtcccgaggatatgggggtggctatggc
agtaattaccgtggtgggatgagtacagggttcaccaacaactggagaggtggtggcggg
taccgcggtggatacaatcgtggtggtgggtataacagaggtggaggttatcagcgatct
gggggtggtgggggttactactga
DBGET
integrated database retrieval system
