Octopus sinensis (East Asian common octopus): 115232426
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Entry
115232426 CDS
T07665
Name
(RefSeq) guanine nucleotide exchange protein SMCR8 isoform X3
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115232426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osn04131
]
115232426
Membrane trafficking [BR:
osn04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
115232426
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
115232426
NCBI-ProteinID:
XP_029658152
UniProt:
A0A6P7U0D6
LinkDB
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Position
LG2:complement(76154417..76235893)
Genome browser
AA seq
950 aa
AA seq
DB search
MFGSTVYPQVSEYSERRTSIRNSKGFSYLTPCPSIIHPWNRGTNLLQDFVMVTEFSELEG
PKPLFVQPSEGIGHFDINAFAVKIMSVDHQPPKNILCNNFTLMEDKQVLFTDIAEGVSAY
VYHFLLYDLQARGYVRPFCMAYVSPDSKKLITFYKEIHKAFSKISSDLKIENLKLFALEM
SHQLQDLEYSLNCLNQKSDGCSVITNDNTASASDTPTVTVQSLEYLRQETLNILEALEEY
KPELFNDYAAYRTKANVKYNPTCKDSSHTDDSREDGPVALAVQSTIDSDQLANHHNVNHD
GVGDDKSCNDSNINKNNKISKDVSTNVEHDKHIPNNLTSSHQFHRGRMKSKHKDPPIDEQ
YVVVNNVDRSFSCSDISSCEHLSKEASNRSESSSQSSESVVPCSSESEFSFASSSSFQQD
NSSHEDSSSVILDRKSDKTSHLFLIDYPSNYKPKLYKPPSRKRFEFMLRKLELMCLNRYD
HWKQLESIHQYYSQDLAILKMHQWEKNLTEPTSSLLTFGGCVTSNFLHGMHRCYCEKERG
MPKHQLISNQMKKLSFSEDQPAQKEVVSRVSSLPDRYHFPQGCTNVAHPTSLPISSQPSE
EWDIITSTSEGDHDISIETSYESTSLYSTCSEHSDDMLCALCQQPNKDASTYDGSLGSLD
GSDESFHSTSSVQSFPCGNTRLNSSKKSFMLLADVINSKKHLLQAKNLMYFLSQYDNINN
VVASLLSGRTVAVVGSCNSEEKVKDIVEALSLFVPGNFIRNHKKVVIPWLKRQLQLKDLT
SFRLVGLSKRKNNTIPRSIMNYVSILDLEKRVVCAPIYEGKIVNSLLRQLQLFQNNPAAY
LAYIHSHFQEISSTAFLYYHSFCMTSANPKASASYIGLDRLAREFRDTSQQFLKTWNIVQ
DDRKIIEFLASLILKQVLEEAQEKGAWIGNREGSNCSFHVSYKPSCTRKC
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatctactgtgtatccacaagtatctgaatatagtgagagaagaacttctatt
cgaaattctaaaggattctcttacttaacaccatgcccttctataatccatccctggaat
cgtgggaccaatctgcttcaagactttgtaatggtcactgaattctcagaacttgaagga
cccaaaccattatttgtccagccatctgaagggattggtcattttgatatcaatgccttt
gcagtaaaaatcatgtctgttgatcaccagccaccaaaaaatattttatgcaataacttc
acattaatggaagataaacaagttctctttactgatatagcagaaggagtttcggcatat
gtctaccattttcttttatatgatttacaagcccgcggttatgttagaccattttgtatg
gcatatgtctcacctgactccaagaaactgataacattttataaagaaatccataaagct
ttttctaaaatttctagtgatttgaagatagaaaatttgaaattgtttgctctggaaatg
agtcatcagctgcaggatctcgaatatagtttgaactgcttgaatcaaaagtcagatggt
tgttctgttattacgaatgataacactgcctctgcatcagatacaccaacagtcactgtg
caaagtcttgaatatcttagacaagaaactttaaacattttggaagccttagaagaatat
aagcctgaattatttaatgattacgcagcatacagaactaaagctaatgtgaaatataat
ccaacatgtaaagatagcagccatacagatgatagtcgagaagatggaccagtagcttta
gcagttcagtcaactattgacagtgatcagttagcaaatcatcataatgttaatcatgat
ggtgttggtgatgataaaagctgtaatgactcaaatatcaacaaaaataataaaatatct
aaagatgtttcaactaatgttgaacatgacaaacatatccccaataacttaacatcaagt
catcaatttcatcggggtcgtatgaaatcaaaacataaagaccctcctattgatgaacag
tatgttgtagtaaacaatgttgacaggtcattttcctgttctgatatttcctcatgtgaa
catttatcaaaggaagctagcaacagatcagagagctcaagccaatcatcggaatccgtc
gtaccatgttccagtgaatcggaattttcatttgcgtcttcaagttctttccagcaggat
aattcttctcatgaagactcttcttcagttatattggaccgcaaatctgacaaaaccagt
cacctatttttgattgattacccttcaaactacaagcctaaattatataagccccccagt
cgaaaacggtttgaattcatgctgcgtaaattagaattgatgtgcctcaatagatatgat
cattggaagcagttagaatcaatacaccagtattatagccaagacttagccatcttgaaa
atgcatcaatgggaaaaaaatctaactgaaccaacttcatctttactaacatttggtgga
tgtgttacaagcaacttccttcatggaatgcaccggtgttactgtgagaaagaacgtgga
atgcccaaacatcaactaatatcaaatcaaatgaaaaaattatcattttctgaagatcaa
cctgcccaaaaggaagttgtgagcagagtttccagtttgccagaccgatatcactttccc
caaggatgcacaaatgtagcacatcctacatcattaccaatttcatcacaaccaagtgag
gaatgggacatcattacatctacctccgaaggagaccatgatatttctatagaaactagt
tacgaaagtacttcgctttattcaacatgcagtgaacattctgatgatatgttatgtgcc
ctttgtcagcaacctaataaagatgcttcaacttatgatggttctctaggatcacttgat
ggcagtgatgaaagctttcattcaacttctagtgtccagtcatttccttgtggtaataca
aggttaaattccagtaaaaagtcattcatgttactggctgatgttataaattcgaaaaag
catcttttacaagctaagaatttaatgtattttcttagtcagtatgacaatatcaataat
gtggtggcaagtcttctgtcaggtcgtacagttgctgtggtgggatcatgtaatagtgag
gagaaggttaaagatattgtcgaagcactctctctctttgttcctgggaactttatcaga
aatcacaagaaagtggtcataccatggttgaaaagacagctacagttgaaagatttaact
agttttcggctagttggtctttcaaaacgaaaaaataacacgataccccgttctatcatg
aactatgttagtattttggacttagaaaaacgagtagtatgtgcacctatttatgagggt
aaaatagtgaattctttgctacgacaattacaacttttccagaacaatcctgcagcttat
cttgcctacatacacagtcatttccaagaaatctcttcaactgcctttctctattatcat
tccttctgcatgacttctgcaaatccaaaggcttctgccagctacattggccttgacaga
ttagcaagagagtttcgagacacatcgcaacagtttctaaaaacttggaatattgttcaa
gacgatcgaaaaattattgagtttcttgccagtttaattttgaaacaggttctagaggaa
gcacaggaaaagggagcttggataggaaatagagaaggttccaattgctcattccatgtc
tcctacaaaccaagctgtacacggaaatgctga
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