Octopus sinensis (East Asian common octopus): 115232631
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Entry
115232631 CDS
T07665
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
osn04054
]
115232631
Enzymes [BR:
osn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115232631
Pattern recognition receptors [BR:
osn04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
115232631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
RIG-I_C-RD
CARD_2
Helicase_C
CARD
RIG-I_C
AAA_19
AAA_11
Zot
nSTAND3
SCRG1
AAA_22
NACHT
PhoH
AAA_30
NESP55
DUF87
Motif
Other DBs
NCBI-GeneID:
115232631
NCBI-ProteinID:
XP_029658486
UniProt:
A0A6P7UC56
LinkDB
All DBs
Position
LG2:76293216..76439596
Genome browser
AA seq
1121 aa
AA seq
DB search
MAERFEKLFNSINPLCVGYIEATHLLPYMPFMRSKAGSIFKAHKKSSEEGFQVMYDALIQ
SDTENKWDIYNEALKEAEFNSICKLYAFMQEQTNDFNSYCNIFEIFSTEITEGQLNIIRF
ANHLKTMETILESQLEDIKLTEEKEGPNSAAILLFAYFPSTLSYLMKDLDKYLNIPGKDD
LWKKIQNAVPVCEDEVNCVSNNRAEMIMQLRQVILETVHPRDIWPVLSLDLNLPSNNIEF
NRSDIEKVMDMYEHSSYQGKSQTLYQALFDAGYEQLCLKIDGRKCHDVINNGYKQLIDAH
YKMLTEKIKTLEILDKLLAAKVINKRDKDDVVAKRESKGDITAAQFLLEIIPSKKDMWHK
DFFEILCKNKQRDLVKELEPDYNCNSDTEADIDSDTNLDTNHEDNPSQIQKQVGTNAKEI
VLREYQKELISKALLGKNCIITAPTGSGKTFMAVKIIEDHFQKNEGKVCKVIFLCNQTNL
AEQQKNVLIGAFPDLIINVIYGSPESQSKKMESFTLSNIVVMTPQCLVDNLKHGRIESLS
IITLLIIDECHHTYSKHPYNILMSRYLDEKFEKANCQLPQVIGLTAVAGIDVTKTGKNAK
EHILEICANLDCDELCITRDNIKELCDHVPVPVEDVKSLPMERESALSKVIKSFMSDVHS
SLNNRELSANSLQFGTTQYIGWLSDAKKKVNSSPFELKHEFASIQYLEKCNIVLRILNGY
RAKDALEILYDYIENETLETDAFQNLKILLKRKLEEFEGHSTQEELEAESSCLLELVDLI
QKKFHDKPDSRVIVFAETKILTRILAKVLKDKSETADFNPQYLMAGLNKDSVPGMSLNKQ
KDTLGMFRNGVCKLLVSTPVAEEGLDIQKCNLVVDYLTVQGVRSHVQKRGRARASDGEFI
QIIGSDPLLDKRATVNRIKVNQMQIIVNEVYEDQLNDPDAFKKTLKEIQMKNKQERDAVQ
VQKMKLVKASGTYELKCTSCNCTAAESSDFRNFEEKCYVIVNLDFRKKISISRSRPSILF
DDVKRIGSIFCDNCGLYWGNQLVYKHTIFDCISIKQFKIVPEGKDPILAKKWLKVPFRDA
VQPLTEEDFKRVREDSSNKFEDDLLPPLEKFPTPESNSNID
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaggtttgaaaaactgtttaactcaataaatcctctgtgtgttggatacata
gaggctacacatctactaccatacatgccttttatgagatccaaagctggttcaatcttt
aaagcccataaaaagtcatctgaagagggatttcaagtaatgtatgatgcattaatacag
agtgatactgaaaacaaatgggatatatacaatgaggcacttaaagaagcagaatttaac
tcaatttgcaaactctatgcatttatgcaagaacaaacaaatgattttaactcctactgc
aatatatttgaaatattcagcactgaaataactgaaggtcaattaaacattatcagattt
gcaaatcatttgaagactatggaaactattttagagagtcaactggaggatataaaactt
actgaagaaaaagaaggacccaattcagctgctattttattatttgcatattttccttct
accttatcatatctgatgaaagaccttgacaaatatcttaatatcccaggcaaagatgat
ttgtggaaaaaaatccaaaacgctgtccctgtctgtgaagatgaagtaaattgcgtgtca
aataacagggctgaaatgatcatgcaattgcgtcaggttatactcgaaactgtccaccca
cgagatatttggcctgtattatcgcttgatctaaatctaccttcaaacaacattgaattc
aacagaagtgacattgaaaaggttatggatatgtatgagcatagttcgtatcaaggaaaa
tctcaaactttatatcaagctctttttgatgctggttatgaacaactttgtttgaagatt
gatggtagaaaatgtcatgatgtaattaacaatggatataaacaattaatagatgcacat
tataaaatgctgactgaaaaaataaagactttagaaattttggataagctcttagctgct
aaagttattaataaaagagacaaagatgatgttgttgcgaaacgtgaaagcaaaggagat
ataactgctgcccaatttctcttggaaataattccttctaaaaaagatatgtggcataag
gatttctttgaaatactttgtaaaaataagcagagagatttagttaaagagctggaacct
gactacaattgcaattcggataccgaagctgacattgattctgataccaatttggacacc
aatcatgaagacaatccatcacagattcaaaagcaagtgggaaccaatgccaaggaaatt
gtactccgtgaatatcaaaaagaattgatttcaaaagcccttttagggaaaaactgtata
ataactgcaccgacaggaagtggtaaaacatttatggctgtgaaaattattgaggatcat
tttcaaaaaaatgaaggaaaagtttgcaaagtaatctttttatgcaatcaaacaaactta
gctgaacaacaaaaaaatgttctgataggtgctttccctgatttgataattaatgttatt
tatggatctcctgagagccaaagcaagaaaatggaatcgttcacattaagtaatattgtt
gttatgactccacaatgtttagttgacaacctgaagcatggtagaattgagagtctttcc
attattacactgctaataattgatgaatgtcatcatacatatagcaaacatccttacaat
atccttatgtcaagataccttgatgaaaaatttgaaaaagcaaattgtcagttacctcag
gttattggtttgacagctgtggctggtattgatgtaacgaaaactggtaaaaatgccaaa
gaacacattttggaaatttgtgccaatctagactgtgatgaattgtgcattactagggat
aatattaaagagttatgtgaccatgtacctgtacctgtggaagatgttaagtcattacca
atggaaagggagagtgctctcagtaaagtaatcaagagttttatgagcgatgtgcacagt
agtttaaataatagagaactcagtgcaaattctttacagtttggaactactcaatacatt
ggatggttgagtgatgcaaaaaaaaaagtgaattcatctccttttgaactcaaacatgag
tttgcaagtatacagtatctggaaaaatgtaacatagttttacggatactgaatggctat
cgtgcaaaggatgccttagaaatattgtatgattatatagagaatgaaacacttgaaaca
gatgcctttcaaaacttgaagattttgttaaaacgtaaactagaggaatttgaaggtcat
agcacacaagaagaactggaggctgaaagttcatgtcttttggaacttgtagatttaatc
cagaaaaaatttcatgataaaccagattcccgtgtcatagtgtttgctgagaccaaaatt
ttgacgaggattttggcaaaggtgttaaaagataaaagtgaaacagctgatttcaatcca
caatatttgatggcaggattaaataaagatagtgttcctggtatgtcattgaataagcaa
aaagatacacttggaatgtttcggaatggtgtgtgcaaacttctggtttcaactcctgta
gcagaagaaggtttagatattcagaaatgcaacttagtagttgattatttgactgtacag
ggagtaagatctcatgtgcaaaaaagaggccgagctcgagcatcagatggtgaattcatt
cagattattggttcagatccactcttggacaaaagagctactgtaaaccgtataaaagtt
aatcaaatgcaaattatagtgaacgaagtttacgaagatcaattgaacgatccagatgct
ttcaagaaaactttgaaagaaattcagatgaaaaataagcaagaacgtgatgctgtccaa
gtacagaaaatgaagcttgttaaggcttcaggtacttatgaactgaaatgtacatcctgt
aactgtacagctgctgagagttcagattttcgaaattttgaagagaaatgttacgtcatt
gtaaatcttgattttcgaaagaagattagtatttcaagaagcagaccttcgatattattt
gacgacgttaaacgcataggcagtattttttgcgataactgcggtctttattggggaaat
caattggtttataaacatactatatttgattgcatatcaataaagcagttcaaaatagtc
cctgaagggaaagatcctatacttgcgaaaaagtggttgaaagtaccatttagagatgca
gttcagcccctcactgaagaagattttaaaagggttcgtgaagatagttctaacaagttt
gaagatgatttgttacccccacttgaaaaatttccaactcctgaaagtaactcaaatata
gattaa
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