Ostreococcus tauri: OT_ostta01g01320
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Entry
OT_ostta01g01320 CDS
T01358
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ota
Ostreococcus tauri
Pathway
ota03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OT_ostta01g01320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta01g01320
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
OT_ostta01g01320
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
AAA_23
TsaE
RsgA_GTPase
AAA_15
AAA_28
SRP54
AAA_22
AAA_14
AAA_30
ORC-CDC6-like
AAA_16
AAA
Arf
AAA_25
Motif
Other DBs
NCBI-GeneID:
9834982
NCBI-ProteinID:
XP_003074193
OrcAE:
OT_ostta01g01320
UniProt:
Q01GU9
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Position
1:complement(199523..200728)
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AA seq
401 aa
AA seq
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MPVPVAETGYARSTTEHARVDANTDAGASVDWWARMASAKAASDADPNAPKPWLRRPGRD
AVENASRAPTRRDIAVPAGVLGIEVRGLTFSYPGIDGTPMEGTTPMIRNLKMALEPGTCT
LLLGANGAGKTTLLKILAGKHLVEREKVLVLGREAFYDTGLTSSGDLSFIGGNWQRDVAF
AGYNIPLAGDFPASRMLDSIPGVDPERKKRIIEVLDVNVNWRMHQVSDGQRRRVQLAWGL
MLPYKVLLLDEITVDLDVLGRAELMGFLREECLSRQVTIVYATHIFDGLESFMTHVAFVA
NGELKFCKKFEDIEGLKEREPGSLLLTVEGWLREEYVLQRERKLLEKAEKKEFQFSRNNG
YASGRTTTTVTYGERLGEKGWLDQSRDRESAFQNSSNAVMR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtccccgtcgccgagaccgggtacgcccgctcgacgaccgaacacgcgcgcgtg
gacgcgaacaccgacgccggcgcctccgtggactggtgggcgcgcatggcgagcgccaag
gcggcgtcggacgccgacccgaacgccccgaaaccgtggttgcgacgacccggtagagat
gcggtggagaacgcgtcgcgcgcgccgacgcgacgagacatcgcggtcccggccggggtc
ctgggcatcgaagtgcgcgggctgacgttttcgtaccccggaatcgatgggacgccgatg
gaggggacgacgccgatgattcggaacttgaagatggcgctcgagccggggacgtgcacg
ctgttgttgggagcgaacggcgctgggaagacgacgttattgaagattttggcgggtaaa
cacttggtggagcgggaaaaggtgctggttctcggacgggaggcgttttacgataccgga
ttgacgtcgagcggggatttgagtttcatcggcggcaactggcagagagacgtggccttc
gcggggtataacattccgttggcgggtgattttccggcgagtcgtatgttggattcgatc
cccggggttgatcctgagcgtaagaagcgcatcatcgaggtcctggacgtgaatgtgaac
tggaggatgcatcaggtgagcgacgggcagcgacgccgcgtgcagctcgcgtggggtctg
atgttgccgtacaaggtgctcttgctcgacgaaatcaccgtggatctcgacgttctcggt
cgcgccgagctcatggggtttttgcgcgaagagtgcctctcgagacaggtgaccatcgtg
tacgcaacgcacatcttcgacggactcgagtctttcatgacgcacgtggcgttcgtcgca
aacggcgagttgaagttttgcaaaaagtttgaagacatcgagggcttgaaggaacgcgag
cccggttctttgctccttactgtcgagggttggctccgcgaggagtacgtgctccagcgc
gaacgcaagttgttggagaaggctgagaagaaggaattccaattcagccgcaacaacgga
tacgcgtcgggaagaaccaccacgacggtgacatacggtgaaagacttggtgagaaaggg
tggctagaccagtcgagagatcgcgaatcggcgttccagaactcaagtaacgcagtgatg
cgctaa
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