KEGG   Ostreococcus tauri: OT_ostta02g00480
Entry
OT_ostta02g00480  CDS       T01358                                 
Name
(RefSeq) Zinc finger, RING-H2-type
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ota  Ostreococcus tauri
Pathway
ota03420  Nucleotide excision repair
ota04120  Ubiquitin mediated proteolysis
ota04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    OT_ostta02g00480
   04120 Ubiquitin mediated proteolysis
    OT_ostta02g00480
  09124 Replication and repair
   03420 Nucleotide excision repair
    OT_ostta02g00480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ota04121]
    OT_ostta02g00480
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta02g00480
Enzymes [BR:ota01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     OT_ostta02g00480
Ubiquitin system [BR:ota04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   OT_ostta02g00480
  Multi subunit type E3
   SCF complex
    Ring finger protein
     OT_ostta02g00480
   Cul2 complex
     OT_ostta02g00480
   Cul3 complex
     OT_ostta02g00480
   Cul4 complex
     OT_ostta02g00480
   Cul7 complex
     OT_ostta02g00480
   Cul8 complex
     OT_ostta02g00480
   Cul9 complex
     OT_ostta02g00480
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      OT_ostta02g00480
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      OT_ostta02g00480
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-RING_16 zf-RING_11 zf-RING-like zf-C3HC4_4 PHD_NSD Prok-RING_4 zf-Nse zf-RING_Vps41 zf-RING_6 zinc_ribbon_16 Rtf2 zf-RING_10 GBBH-like_N zf_RING_Vps8 Baculo_RING TerY_C Zf_2nd_IFT121 RINGv
Other DBs
NCBI-GeneID: 9837123
NCBI-ProteinID: XP_022840672
OrcAE: OT_ostta02g00480
UniProt: A0A090M748
LinkDB
Position
2:121198..121678
AA seq 106 aa
MSCTTADTRFLLKKWSAVAVWSWSICTDTCAICRNSLHEGSIEYQANPAASSDDGLSIAW
GNCGHVFHLDCISKWLRTRSNCPLCNKEWEFSKVEKIQLPALGLDR
NT seq 321 nt   +upstreamnt  +downstreamnt
atgtcgtgtacgactgcagacacgcgctttctgctgaagaagtggtcagcggtagctgtc
tggtcctggtcaatttgcacggacacttgtgccatctgtaggaacagtcttcacgaaggg
agcattgaataccaagcaaacccagctgcatcatccgatgacggtctcagcattgcgtgg
ggtaactgtggacatgttttccatctcgattgtatctcgaaatggctaaggacacgcagt
aactgtccactttgcaacaaagaatgggagttctccaaggttgaaaagatacaactgccc
gcacttgggcttgatagataa

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