Ostreococcus tauri: OT_ostta09g00130
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Entry
OT_ostta09g00130 CDS
T01358
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ota
Ostreococcus tauri
Pathway
ota03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OT_ostta09g00130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta09g00130
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
OT_ostta09g00130
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_25
Zeta_toxin
AAA_28
AAA_29
AAA_30
nSTAND3
TsaE
VapE-like_dom
AAA_23
HerA_C
AAA_33
Motif
Other DBs
NCBI-GeneID:
9831866
NCBI-ProteinID:
XP_003080997
OrcAE:
OT_ostta09g00130
UniProt:
Q012L4
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Position
9:complement(17567..18439)
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AA seq
290 aa
AA seq
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MEIALSDAATEPSVRVDGLTYAYPGHEAVVRAWTLALPPGSRCLLSGANGAGKTTALQVL
AGKTMVSEDAVRVLGRPPFHDIALTCDGELSYLGAQWRRNIGSAGADVPLSGDISARAMI
EGVTGVDPERRERLVKLLDVDLDWSMKALSDGQRRRVQICMGLLKPYKVLLCDEITVDLD
ILGRLDLLKFFKEECEQRGATIVYATHIFDGMADWMTHLAFTSNGELKYGGAKEDIPEIQ
GTKHLLSTIEKWLRIDRDERRVREAERAANPPPKVDAASHFQTRHMAYYR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcgctcagcgacgccgcgaccgaaccctcggttcgagtcgacgggctgacg
tacgcgtacccgggacacgaggcggtcgtgcgcgcgtggacgctcgcgctgccgccgggg
tcgagatgcttgctcagcggtgcgaatggggctggtaaaacgacggcgctgcaggtattg
gctgggaaaaccatggtgagcgaagacgcggtgcgggtgctgggacgaccgccgtttcac
gacatcgcgctcacgtgcgacggcgaactgagctatctcggggcgcagtggcgaaggaac
attggaagcgccggagccgacgtgccgctgagcggagacatctcggcgcgagcgatgatc
gagggcgtcactggggtcgatccagagcgaagagaacgattggtcaagcttttggacgtt
gatttagattggtccatgaaggcgctgagtgatggacagcgacgacgggtgcaaatctgc
atgggactcctcaagccgtacaaggtgctcctgtgcgatgagatcacggtcgatttggac
attttgggccgactggacctgctcaaattcttcaaggaggaatgcgagcagcgtggggcg
actatcgtgtacgcgacgcatatctttgacggcatggcggattggatgacgcacctcgcg
ttcacgtccaacggcgagctcaagtacggaggcgctaaggaagatattccagagattcaa
ggaacgaaacacttattgtcgacgatcgagaagtggttacgcatcgatcgcgacgagcga
cgcgtgcgcgaggccgagcgcgcggcgaatcctccgccaaaggtggacgcggcgagccac
ttccagacgcgccacatggcgtactatagatga
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