Ostreococcus tauri: OT_ostta13g02730
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Entry
OT_ostta13g02730 CDS
T01358
Name
(RefSeq) SNF2-related
KO
K15083
DNA repair protein RAD16
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta13g02730
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
OT_ostta13g02730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-PARP
zf-RING_2
ResIII
zf-RING_5
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
DEAD
zf-C3HC4_2
zf-TFIIIC
U-box_ZFPL1
zf-RING_Vps41
zf-RING_6
zf-Nse
Nop14
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
9837555
NCBI-ProteinID:
XP_022840252
OrcAE:
OT_ostta13g02730
UniProt:
A0A096P7P4
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All DBs
Position
13:complement(<480591..>483845)
Genome browser
AA seq
1084 aa
AA seq
DB search
MVELTIVDAWDGKNVTWRPIYEDDSEEYRVFTHQCEYAKSGRGKCGRCGEKIAKDTVRVG
EPLKYRGGDYGWISKWMHPECYRAEGATREELERSVYGLDALKDGDRELLLAHVLNPERP
EIENTALDVMSEEFLCRPAIEPMDAPRALTRPLLEFQREGLRWMCSNEEGEARGGILADE
MGMGKTIQCISMLLARKEAWMKDRAELGEMVTDADRPPPTLVVVPTSALVQWEEEIKACV
DEGSLRVFVYYAERKDVTDDSFNGVDVVLTTYPVIEAEWRKIINRHLVACQWCGKKYLPR
SMVTHLKYFCGPDAVRTEKLARREVTRDVANEKAMRTLKIKEGSAKDVKKMIPTPANFYK
ELMAKAGRETMSMYEGAHKARERAAAGLAPGGDAVAVKEEIVEPSEVMKALISQLPSPPS
MEEIKEEFVTDEGDVDESGLAGASMASIGDFVNKAKKRKSTAKKTKVASQSKKSAKKSLR
DASDDDESDYKPDTDEDDIDDDDGGLIIVESDSDEPKKKKKKKDARAKSADQSSPKIGAT
VSTVSTVEDLPTLSQGSGQLEGDSGDDVDLSDSIMHRTMWHRIVLDEAHKIKARTSNTAK
CIYALKSTYKWCLTGTPLQNRIGDLYSLVRFLRMDPYAYYFCSTKGCECKTLSWNFGPEA
RFCTECGCGAPRHYSHFNRTVLNPINRYGYIGDGKKAMLTLRNDILLPMQLRRTKAERAS
DVQLPELKIVIQENEFNEVEQDFYESLYMLTRAKFDGFVKKGSVLHNYAHIFELLARLRQ
ACDHPYLVIHSKSANVKRDAPDAPKVESPADAGDTVKHYCGMCQDEIEEEDAALASCKHI
FHRECIMQYASCAPADGKKVTCPVCRTALTIDFSPESLESAKSAIGRFNKDPLPDKSILN
KLDLTQYTSSTKVETLVNALRDMRNQENGQLNKAIVFSQYTAMIEIVEWRLKKAKFTIAK
LLGSMPVTQRAANLQAFREDPNVSVILMSLKSGGEGLNLQAANYVYVLEPWWNPAVEMQA
VMRAHRIGQHRPVTAVRFSTKGTIEERMMELQEKKQLVFEGCMDGNAAALSQLTAEDLQF
LFKR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggttgaactcaccatcgtcgacgcgtgggacgggaagaacgtgacgtggagaccgatc
tacgaggatgacagcgaggagtaccgagtgttcacccatcagtgcgagtacgccaagagc
ggacgaggaaagtgcggacgatgcggagagaagatcgccaaggacaccgtgcgagtgggt
gaaccgttgaagtatcgcggtggggattacggatggatctcgaagtggatgcacccggag
tgttatcgcgcggagggggcgacgcgggaggagttggagcgctcggtgtacggattggac
gcgttgaaggatggcgacagggagttattattggcgcacgtgttgaatccggagcgaccg
gagattgagaacacggctttggacgtgatgagcgaggaatttctgtgtagaccggcgatc
gagcccatggacgcgccgagggcgttgacgcgaccgctcttggagtttcagagagaaggc
ttgcggtggatgtgttcgaacgaagagggcgaggcccggggtgggattctggcggatgaa
atggggatgggaaaaaccatccagtgcatctcgatgctcttggcgagaaaggaggcgtgg
atgaaggatagggcggagttgggcgagatggtcacggacgccgacagaccgccgccgacg
ctcgtggtggtaccaacgtcggcgctcgttcagtgggaggaagagatcaaggcgtgcgtg
gacgagggttcgcttcgcgtgttcgtatactacgccgaacggaaagatgtcacggacgac
agcttcaatggagtggacgtggtgttgacgacgtaccccgtcatcgaggctgagtggcgg
aaaatcatcaaccgccacctcgtggcgtgtcagtggtgcggtaaaaagtatctccctcgc
tcgatggtgacacacttgaagtacttttgtggtccagatgccgttcgcacggagaagctc
gcgcgccgcgaggtgacgagagacgtggcgaatgagaaagcgatgaggacgttgaaaatc
aaagagggcagcgcaaaggatgtgaaaaagatgattcccacgccggcaaacttttacaag
gaactcatggcgaaggctggcagggagaccatgagcatgtatgagggcgcccacaaggcg
cgtgagcgtgccgcggctggtctcgctccgggaggcgacgcagtcgccgtgaaggaagaa
atcgtcgagcctagcgaggtcatgaaggcgttgatttctcaattgccatcgcccccgtcg
atggaggaaatcaaggaagagttcgtcaccgatgaaggagatgtggatgaatccgggtta
gctggcgcgtcgatggcgtcgataggcgatttcgtgaataaggcgaagaaacgcaaatcg
acggcgaagaaaaccaaagtagcgagccagtcaaaaaagtcggcaaagaagagtttacga
gacgctagtgatgatgatgagagcgattacaaaccggataccgatgaagacgatatagat
gatgacgatggtggattgatcatcgttgagagcgacagcgatgagccaaagaagaagaag
aagaagaaggatgcgcgagcaaagagcgccgaccaatcgtctcctaaaattggagccacg
gtgtcaacggtgtctacggtcgaagatcttcctacactctcgcaaggcagcggtcagtta
gagggcgatagtggggacgatgtcgatctctcagattcaatcatgcaccgcacgatgtgg
cacagaattgttctcgacgaagcgcacaaaatcaaggcgcgaacgagcaatacggcaaaa
tgtatatatgctctcaaatccacatacaagtggtgcttgacgggaactcctttgcaaaat
cggatcggtgatttgtacagtctcgtcagatttttgcgcatggatccgtacgcgtactac
ttttgttccacgaaggggtgtgaatgcaaaactctctcctggaactttggtccagaggct
cggttttgcacggagtgcgggtgcggggcaccgcggcactactcgcatttcaatcgtacc
gttctcaatccaatcaaccgatacggctacatcggcgacggtaagaaggctatgctcacg
ctgaggaatgacatcctgctacccatgcagctcagacgcaccaaggctgagcgagcatcc
gacgtgcaactgccggaactgaagatcgtcattcaagaaaacgagttcaacgaggtcgaa
caagacttttacgaatcgctttacatgttgactcgtgccaagttcgatggattcgtcaag
aagggtagcgtcttgcacaactacgcgcacattttcgagcttctcgcgaggcttcgccaa
gcgtgcgaccatccttacctggtgattcactcgaagagtgcgaatgtgaaacgggatgcc
cccgatgctccaaaggttgagtcgcccgccgatgcgggggacacggtgaagcactattgc
ggcatgtgtcaggatgaaattgaggaagaggatgccgctctggcgagttgcaaacacatt
ttccaccgcgagtgcatcatgcaatacgcctcgtgcgcaccagcggacggtaaaaaagtc
acgtgtccggtttgtcgcaccgcgctaacaattgacttttccccagaaagtctcgagagc
gcgaagagcgcgatcggtcgtttcaacaaggatcccttgccagacaagtcgatcctgaat
aaacttgatttgacgcagtacacgtcgagtacgaaagttgagactctcgtcaacgcgctg
cgggacatgagaaatcaagaaaacggacaactgaacaaggccatagtcttttctcagtac
acggcgatgatagaaatcgtcgaatggcgtttgaaaaaggctaagtttacgattgccaaa
ctccttggctcgatgccggtgacgcagcgggcagcgaatttgcaagcgttcagagaagac
ccgaacgtaagtgtcattttgatgagcctaaaatccggcggtgaaggtctcaatttgcaa
gccgcgaactacgtctatgtgctcgaaccttggtggaacccagcggtggagatgcaagcc
gtgatgcgagcacatcgcattggacagcaccgcccagtgacggcggttcgattctccacc
aagggcacaatcgaagagcgcatgatggagcttcaggagaagaaacagctcgtcttcgaa
ggatgtatggacgggaacgcggcagctttgtcgcaattgaccgcagaggatttgcagttt
ttgttcaaacgatga
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integrated database retrieval system
