Onychostruthus taczanowskii (white-rumped snowfinch): 121332980
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Entry
121332980 CDS
T07590
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121332980 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otc03041
]
121332980 (EFTUD2)
Spliceosome [BR:
otc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
121332980 (EFTUD2)
Complex C
U5 SnRNP specific factors
121332980 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
121332980
NCBI-ProteinID:
XP_041254901
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELEDDDDDDDMGEHDEEHAGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgacgagtttgggaactacatcgggcccgagttggactcggac
gatgacgacgacgagctgggccgagaggccaaagacctggacgagctggaggatgatgat
gatgatgatgacatgggggagcacgacgaggagcacgctgggatggaggtggtgctgcac
gaggacaagaagtactaccccacagcagaggaggtctatgggcccgaggtggagaccatc
gtgcaggaggaggacacacagccactcactgagcccattatcaaacctgtgaaaaccaag
aagttctccctgatggagcagacactgccggtcactgtctacgagatggatttcctggca
gatctgatggacaactcggagctgatccggaatgtgactctgtgtgggcacctgcaccac
ggcaagacttgttttgttgactgcctgatagagcagacgcacccggaaatccggaagcgc
gacgatcaggatctctgctacactgatatattgttcacagagcaggagaggggggtgggg
atcaagagcaccccagtgacaattgttctgccggacaccaaaggaaaatctttcctcttc
aacatcattgacactccaggtcatgtgaacttctctgacgaggtgacagccggcctgcgc
atctcggacggcgtcgtgctcttcatcgacgcggccgagggggtgatgctgaacacagag
aggctgatcaagcacgccgtgcaggagaggctggcagtgactgtgtgcatcaacaagatt
gacagactcatcctggagctgaaactgccccccacagatgcttactacaagctcagacac
attgtagatgaagttaatggtctgatcagcatgtattccaccgatgagaacctcgtgctg
tctccccttctggggaacgtgtgcttctccagctctcagtacagcatctgcttcacactg
gggtcttttgcaaagatttatgcagacacatatggagacatcaattaccaggagtttgca
aagcggctttggggcgacatctacttcaacccgaagacccgcaagttcaccaagaaggcc
ccgacgagcagctcccagcgcagcttcgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggatgtggacacaaccctgcccaggactctggatgagcttggc
atccacctgaccaaagaggagttgaaactgaacatccggcccctgctgcgactcgtctgc
aagaaattctttggggagttcacaggctttgtggacatgtgtgtgcagcacattccctcc
ccaaaagtgggggccaagacaaaaattgagcacacctacaccggcggtgtcgactccgac
ctgggggaggccatgagcgagtgcgaccctgacggtcccttgatgtgtcacacaactaaa
atgtacagcactgatgatggtgtccagttccacgcctttggcagggtgctcagtggcacc
atccatgctgggcagcctgtgaaggtccttggggagaactacaccctggaagatgaggag
gattcccagatctgcaccgttggacgcctctggatctcagttgcaaggtatcacattgag
gtgaacagagttcctgctggcaactgggtgctgattgagggcgtggaccagcccatagtg
aagacagcaactgtgacagagcctcggggcaatgaggaggctcagatcttccgtcccttg
aagttcaacaccacatctgttatcaaaatagctgtggagccagtcaacccctcagagctc
cccaaaatgttggatggtctccgcaaagtcaacaagagctacccctcacttacaactaag
gtggaagagtctggggaacatgtgatcctgggaacaggagagctgtacctggactgtgtg
atgcacgacctgcggaagatgtactccgagatcgacatcaaggtggctgatccagtggtg
acattctgtgagacagtggtggaaacatcctccctgaagtgctttgctgagacacccaac
aagaagaacaagatcacaatgattgctgagcccctggagaagggactggcagaggacatt
gagaatgaagtggtgcagataacgtggaacagaaagaagctgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttccatctgggcctttgggccagatgccact
ggcccaaacatcctggtagatgacacactaccctcagaggtggacaagtctctgttgggt
tcagtgaaggacagcatcgtgcagggcttccagtgggggaccagggaaggacccctctgt
gatgaattgatccgcaatgtgaagttcaagatcctggatgcagtgattgctcaggagccc
ttgcacaggggtggagggcagatcatccccacggcccgaagggtggtgtactctgccttc
ctcatggccacccctcgcctcatggagccctactacttcgtggaggtccaggcccctgct
gactgtgtgtctgccgtgtacacggtgctggcccggcgcagaggccacgtgacccaggat
gctccaatcccaggctctcccctctacaccatcaaagccttcatcccagccattgattcc
tttggttttgagacagacttgaggacccacacgcagggacaagccttctctctctctgtc
ttccaccactggcagattgtgcctggggaccccttggacaagagcatcgtcatccggccg
ctggagccgcagccagccccacacctggccagggagttcatgatcaagaccaggcgtagg
aagggcctgagtgaggacgtgagcatcagcaagttcttcgacgaccccatgttgctggaa
ctggccaagcaggacgtcgttctcaactaccccatgtaa
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