Onychostruthus taczanowskii (white-rumped snowfinch): 121339269
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Entry
121339269 CDS
T07590
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121339269 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otc03000
]
121339269 (KDM2A)
04121 Ubiquitin system [BR:
otc04121
]
121339269 (KDM2A)
03036 Chromosome and associated proteins [BR:
otc03036
]
121339269 (KDM2A)
Enzymes [BR:
otc01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
121339269 (KDM2A)
Transcription factors [BR:
otc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
121339269 (KDM2A)
Ubiquitin system [BR:
otc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121339269 (KDM2A)
Chromosome and associated proteins [BR:
otc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121339269 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
121339269 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
121339269
NCBI-ProteinID:
XP_041266881
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRIVDVMDVNTQRDIEMSMAQWARYYETPEEEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEDDE
DAAGKDSRRPMTRKSILTSPIANGANVDYDELGKSCRSSLPGLKKTPSIDSSDSSRGSQN
GQAWDPSGGSPRKSRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKL
LLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPAPRPTPVRS
TVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLP
HSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKC
YQGDDAEKGQKRKVEESDDDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRGV
VTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKLH
GSYLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHSPRVVVRHAPARMPLRSGGDEDAA
AEEEEDEEEEEDENAEEGGAARLNGRGGRAQEGEESCVQREVWMSVFRYLTRRELCECMR
VCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNR
LPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNR
SKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNS
LTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDE
KLIQKIS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggac
gacgacagcagtcctggcgtgtccttctcgctctcttccgaggagtcggagatggagccc
gaggaagaacggatccgttacagccagagactgcgtggcacgatgaggcggcgttacgag
gacgacggcatctccgatgatgagattgaagggaagaggacgtttgacctcgaggaaaag
ctgtccaccaacaagttcaactccactttcgtggtcttcatggaaggcaaagacttcaca
gttgaatacatccagcggggtggcctgagggacccgctcatcttcaggagctcggacggc
ctggggataaagatgccggatccggacttcagcgtgaacgatgtgcggctgtgtgtgggg
agccgacggatagtggatgtgatggatgtgaacacgcagcgggacatcgagatgtccatg
gcgcagtgggcgcgctactacgaaacgccagaggaggagcgggagaaactctacaacgtc
atcagcctggagttcagccacaccaaactggagaacctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccaggcacttaaaggaaagtcagacagag
tctaccaatgccatcctggagatgcagtatccaaaggtgcagaaatactgtttgatgagt
gtcaagggctgctacacagatttccacgtggactttggtggcacttctgtgtggtaccac
atccaccgagggggaaagatcttctggctgatccctcccacgccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacattttccttggggacagagtgtca
gaatgccagcgcatcgagctcaagcagggctacacatttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacgctggtttttggtggcaacttcttacacagcttc
aacatccctatgcagctccggatctacagcatcgaggaccgcacacgggtcccaaataaa
tttcgttatcccttctattacgagatgtgttggtacgtgctggagcgttacgtgtactgc
atcaccagccgctcccacctgaccaaggacttccagaaggaatccctcagcatggatatg
gagctgagctcctcagactcagtgaacatggaagaggaggaggaggaggaggacgatgag
gatgcagcagggaaggattcccggcgccccatgaccaggaagtccattctcaccagcccc
attgccaacggtgccaacgtggactatgacgaactgggcaagagctgccggagcagcctg
ccgggtctcaagaagaccccatccatagactcttccgactccagccggggctcccaaaac
ggccaggcctgggacccgagcgggggcagtccccgcaagagcaggaaggtgcacctgacc
cagtttgagctggaggggctgcgctgcctcgtggacaagctggagtcgctccctctgcac
aagaagtgtgttcccaccggcatcgaggacgaggacgccctcatcgctgacgtcaagctg
ctgttggaagaatacgcaaacagcgaccccaaactggcacttacaggcgtccccatcgtc
cagtggcccaagagagataagctaaagctccaggcccggctgcgggtgcgcctgcccacc
atccccatcaccaagccgcacaccatgaagccagcaccgcgcccgactcccgtcaggtcc
acggtgtctcccatcgtgtcgggcgcccggcggaggcgggtgcggtgccggaaatgcaag
gcctgcatgcagggcgagtgtggcatgtgccactactgcagggacatgaagaagttcggc
gggcccggccgcatgaagcagtcctgtgtcctccggcagtgcttggcgcccaggttgcct
cactcggtcacgtgtgcactttgcggggaggtggatcagaacgaggactcgcaggacttt
gagaagaagctcatggagtgctgtatctgcaacgagatcgttcaccctggctgtctgcag
atggatggggaagggctgctcaatgatgagctccccaactgctgggagtgccccaagtgc
taccagggtgacgacgcagagaagggccagaagcggaaggtggaggagagcgatgacgac
acggcacaagccaaggtgctgcggcccctgcggagctgcgaggagcccctgacccccccg
cccaactcgcccaccccgatgctgcagctgatccacgaccccgcgtccccccgtggggtg
gtgacacgctcgtccccgggggccgggcccagcgaccaccacagcgccagccgggacgag
cgcttcaagcgccggcagctgctgcggctccaggccacggagagaaccatggtgcgggag
aaggagaacaaccccagcggcaagaaggagctgtcggaggtggagaaggccaagctgcac
ggctcctacctcaccgtgacgctccagcgccccaccaaagatgtccatggcacttcgatt
gtccccaagctccaagccatcacggcctcctcggccaacctgcagcactcgccgcgcgtg
gtcgtgcgccacgcgcccgccaggatgcccctgcggagcgggggcgacgaggacgcggcc
gccgaggaagaggaggacgaagaggaagaggaggacgagaacgcggaggaggggggggcg
gcccggctgaacgggcgcgggggccgggcgcaggagggcgaggagagctgcgtccagcgc
gaggtctggatgtccgtgttccgctacctcacccgcagggagctctgcgagtgcatgcgg
gtgtgcaagacctggtacaagtggtgctgtgacaagagattgtggacaaagatagacttg
agcaggtgcaagtccatcaccccgcaggcgctgagcggcatcatcaaaaggcagccggtc
agccttgatctcagctggaccaatatctcaaaaaaacagcttacatggctcgtcaacagg
ctgccaggcctgaaagacctcatcctagcaggctgttcctggtctgcggtctgtgccctc
agtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatcaag
gaccctcagatccgggacttactcacgcctccaacagacaaacccagtcaggacaatcgc
agcaaactccgcaacatgatcgacttccggctcgccgggctggacatcacggacgccacg
ctgcgcctgatcatccgccatatgcccctgctctcccgcctcgacctcagccactgcaac
cacctcacggaccagtcggccaacctcctcaccgccgtgggctcctccacacgcaactcc
ctcaccgagctcaacatggcaggctgcaataagctgacggaccaggccttgctgtacctg
cgccgcatctccaacgtcaccctcatcgacctgcggggttgcaaacagatcacccgcaaa
gcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctgtctgatgag
aagctgatccaaaaaatcagctag
DBGET
integrated database retrieval system
