Onychostruthus taczanowskii (white-rumped snowfinch): 121344869
Help
Entry
121344869 CDS
T07590
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04010
MAPK signaling pathway
otc04120
Ubiquitin mediated proteolysis
otc04140
Autophagy - animal
otc04144
Endocytosis
otc04517
IgSF CAM signaling
otc04620
Toll-like receptor signaling pathway
otc04621
NOD-like receptor signaling pathway
otc04622
RIG-I-like receptor signaling pathway
otc05132
Salmonella infection
otc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121344869 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121344869 (TRAF6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121344869 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121344869 (TRAF6)
04140 Autophagy - animal
121344869 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121344869 (TRAF6)
04621 NOD-like receptor signaling pathway
121344869 (TRAF6)
04622 RIG-I-like receptor signaling pathway
121344869 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121344869 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
121344869 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otc04131
]
121344869 (TRAF6)
04121 Ubiquitin system [BR:
otc04121
]
121344869 (TRAF6)
Enzymes [BR:
otc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121344869 (TRAF6)
Membrane trafficking [BR:
otc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121344869 (TRAF6)
Ubiquitin system [BR:
otc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
121344869 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-TRAF_2
zf-C3HC4_4
zf-RING_5
PspA_IM30
SlyX
Med21
RING_XB3-XBAT31
TRAF3_RING
zf-RING_11
CCDC18_1st
Sina_ZnF
HAP1_N
U-box
CENP-F_leu_zip
PMD1-like
zf-C2HC_3
CCDC39
UPF0242
Spc29
DUF1664
ATG16
HMMR_N
DUF16
DUF2247
DUF8221
CEP104_ZnF
ADIP
ZapB_rel
Cortex-I_coil
Motif
Other DBs
NCBI-GeneID:
121344869
NCBI-ProteinID:
XP_041277109
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MSLLHSCGAREAQSGCCAAMASACSAAAKDEGGSAGSGAGSAPASFSDETQGYDVEFDPP
LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNFA
KREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECLQCQGTFPKNRLKEHMTQECP
RRQVCCPNCATSMAYEDKELHDQTCPLANIYCEYCNTVLIREQMPNHYDNDCPTAPVPCF
YSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFLNGLPFEPALFSH
VSHAAYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNLEGK
ITEMEAQQCTGIYIWKIENFSGLQKAQEEERPVVIHSPGFYTGKPGYKLCLRLHIQLPNA
QRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMETKPELLAFQ
RPTIHRNPKGFGYVTFMHLETLKQRTFIKDDTLLVRCEVLTRLDLNSVRREGFQARSTDG
AM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctgcacagctgcggggcccgggaggcgcagagcggctgctgcgcggccatg
gccagcgcctgcagcgccgccgccaaggacgagggcggcagcgcgggcagcggcgccggc
agcgcgcccgcctccttctccgacgagacgcagggatacgacgtggagttcgacccgccc
ctggagagtaaatacgagtgccccatctgtttgatggctctgcgggaagcggtgcagacg
ccgtgtggccaccgtttctgcaaaggctgcattgtcaaatccataagagatgcaggccac
aaatgtcctgtagacaatgaaattctgcttgaaaatcagctttttcctgacaactttgcc
aaacgggaaatcctttcattaatggtcaaatgtcccaacaagggctgcagcatgaagatg
gagctcaggcacttagaggaccaccagctgcagtgtgatttttccactgtggaatgcctg
cagtgccaaggaaccttcccaaagaaccgtctgaaggagcacatgacccaagagtgtccg
aggcgtcaagtgtgttgcccaaactgtgccacatctatggcctatgaggataaagagctt
catgaccagacctgcccacttgccaatatatattgtgaatattgcaacacagtgctcatc
agggagcagatgcctaaccattatgacaatgattgtcctactgccccagtgccatgtttt
tacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggcacgacatatgcag
gagttcactcaggttcacatgaggatgatggctcagagttttcagaacatcagtgttact
gctgcaaatcctgtacccttcctcaatggcctgccctttgagcctgccctcttctcacac
gtgtcacatgctgcatacaactgcaatccagaagttgaaaacttcaaggaaactattcag
cagttggaaggtcgtctggtgagacaagatcaccaaatcagggaactcattgctaaaatg
gagactcagaacactcacatggcagaactcaaacgtactataagaaatttggagggaaag
attactgaaatggaggcacaacaatgtactggtatttatatctggaagattgagaatttc
agtggactgcagaaagcccaggaagaagagagacctgtagtgatacacagtcctggcttc
tatacagggaagcctggctacaagctgtgcttgcgcctgcatatccagttaccaaatgct
cagcgctgtgctaattttatctctctgtttgtgcacactatgcaaggggagtatgacagc
cacctgccctggcctttccaaggcaccattcgactttctattttggatcaatcagaaggc
ccagaaaggcagaaccacgaagaggtgatggaaaccaagccagagctactggccttccag
agaccgacaattcaccgcaatccgaaaggttttggttatgtgactttcatgcacctggag
accttgaaacagagaaccttcatcaaggatgacacgctcctggtgcgctgcgaggtgctc
acgcgcctggacttgaacagtgtccgcagagaaggcttccaggcccgcagcactgatgga
gccatgtag
DBGET
integrated database retrieval system
