Onychostruthus taczanowskii (white-rumped snowfinch): 121348252
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Entry
121348252 CDS
T07590
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04115
p53 signaling pathway
otc04145
Phagosome
otc04148
Efferocytosis
otc04350
TGF-beta signaling pathway
otc04510
Focal adhesion
otc04512
ECM-receptor interaction
otc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121348252 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121348252 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121348252 (THBS1)
04148 Efferocytosis
121348252 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
121348252 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
121348252 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121348252 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otc04131
]
121348252 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
otc00536
]
121348252 (THBS1)
Membrane trafficking [BR:
otc04131
]
Endocytosis
Phagocytosis
Opsonins
121348252 (THBS1)
Glycosaminoglycan binding proteins [BR:
otc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121348252 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
cEGF
TSP1_ADAMTS
TSP1_CCN
Laminin_G_3
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
121348252
NCBI-ProteinID:
XP_041283505
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MGPATALCLLLLVLGGSETKRTAESRNDDNSVFDLFELIGFMRKGAGRRAPGVYLVKGPE
SSSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGS
GHVFSLVSNGKAGSLDLSLSVDGKQQLVSVEDVLLATGHWKNITLFVQEDRAQLYVGCEK
MENAELDIPIQNIFTRDLASSAMLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS
SSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTL
QDRVRKVTEENEIIAKVVQITPGACIHNGVLHKNKEEWTIDSCTECTCQNSATICRKVSC
PLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRC
EGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKP
CEGEARENKACQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVG
EARGTQVCNKQDCPIDGCLSNPCFAGAVCTSAPDGSWKCGACPAGYHGDGIHCQDIDECK
EVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMSNKQVCKPRNPCTDG
THDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHC
KKDNCPNLPNSGQEDYDKDGIGDACDSDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDR
CDNCPYNHNPDQTDTDNNGEGDACAIDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQC
DNCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA
CDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDNVPDIDDICPENVEIS
ETDFRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF
INTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPG
EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMA
DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggggccagcgactgctctctgcctccttctgctcgtgctcggcggctcagagaccaag
cgcactgcagagtccaggaatgatgataacagcgtcttcgatctctttgagctcattggc
ttcatgcggaagggagccgggcgccgggcccccggggtgtacctggtgaagggaccagaa
tcctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgactcg
aagttccaagacttattagatgccatccatgctgagaagggcttcattctcctggctact
ctccgacaagccaagaagagcagaggcacactgctctctgtggaacagaaagacggctct
ggtcatgtcttcagtctagtatcaaatggcaaggcaggctccctggacctgagcctttct
gttgatggcaagcagcagttagtgtcagtagaggatgtcttgctagctacaggacactgg
aagaatatcaccctgtttgtgcaggaggaccgagctcagctgtatgtggggtgtgagaaa
atggagaacgctgaactggacatccccatccagaacatcttcactagggacctggccagc
agtgccatgctccgtattgccaaagggggagtcaatgacaacttccagggtctgctgcag
aatgtgcggtttgtgtttggaacaactctggaaactatcctgcggaacaaaggctgctcc
agctccactagtgcaatcattactttggacaaccccatcaatggttccagcccagctatc
cgcactaattacattggccataaaacaaaggacatccaagctgtctgtggattttcctgt
gatgagctgacaaatatgtttgtggaactgcaagggctacgttccatggttacaacactt
caagacagagttcgaaaagtgactgaagaaaatgaaatcattgccaaagtagtccagatc
actcctggagcatgcattcataatggagtcttgcacaaaaataaagaggagtggactatt
gacagctgcactgaatgtacttgccagaactctgccaccatatgccggaaagtgtcctgt
cctctcatgccttgttccaatgccactgtgcctgatggggagtgctgccctcgatgctgg
cctagcgactacgcagacgatggatggtctccttggtctgaatggacctcgtgttctgtg
acctgtgggaatgggattcagcagagaggccgctcctgtgacagtctcaataaccgctgt
gaaggctcctctgtgcagactcggacttgccaccttcaggagtgtgataagagatttaaa
caggatggtggctggagtcactggtcaccatggtcatcgtgttctgtcacttgtggcacg
ggcatcattactagaattcgcctttgcaactctccagtgccacagctgaatggcaaacct
tgtgagggtgaagcaagagaaaacaaagcctgccagaaagatccttgcccaattaatggc
aactggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcag
aagcgaagccgtctctgcaataatcccgagcctcagtatggtgggaagacttgtgtaggt
gaagctagggggactcaggtctgcaacaaacaggactgtccaattgatgggtgtctgtct
aatccctgctttgcgggggctgtgtgcaccagtgcccctgatggttcctggaagtgtggt
gcctgtcctgctggctaccatggtgatggtattcactgccaagatattgatgagtgcaaa
gaggttcctgatgcctgctttgtcttcaacggagtgcacaggtgtgagaatactgaacct
gggtacaactgtctgccctgcccaccacgtttcactggaacacagccatttggccgcagt
gttgaggatgccatgagtaacaaacaggtctgcaagccacgtaatccatgcacagatgga
acacatgactgcaacaagaatgccaaatgcaattaccttggccactttagtgaccctatg
tatcgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatact
gacttggatggatggccaaatgagaacctggtttgtgttgccaatgctacttatcactgc
aaaaaagataactgccctaatctgcctaactcagggcaggaagactatgataaggatggg
attggtgatgcctgtgacagtgatgatgatgatgatggcattcctgatgaccgggacaac
tgtccattcatctacaacccacagcagtatgactacgacagggatgatgttggtgaccgc
tgtgacaactgtccctacaatcacaaccctgatcaaactgacactgacaacaatggagaa
ggagatgcatgtgcaatagatattgatggagatggagtgcttaatgaaagggacaactgc
cagtatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcagtgt
gataactgcccactggaacacaaccctgaccaggaagacaccgattctgatcgcataggt
gatcagtgtgacaacaaccaggacatagatgaagatggccatcaaaataaccttgataac
tgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcc
tgtgaccatgatgatgacaatgatggtatccctgatgacaaagacaactgcagattggtt
gccaacccagatcaagctgattctgatggtgatggacgtggagatgcctgcaaagatgac
tttgaccaagacaatgtgccagatattgatgatatctgccctgaaaatgtggaaattagt
gagactgatttccggaaatttcagatgattcccctggatcccaaaggaacatcccaaaat
gatccaaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgac
cctggccttgcagtcggttttgatgaattcaatgctgtggacttcagtggtaccttcttc
atcaatacagaaagggatgacgattatgctggctttgtatttggctaccaatctagcagt
cgtttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaacc
aaagctcaaggctattcaggtctctccatcaaagtagtgaattccaccactggtccagga
gaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttg
tggcatgatcctcgtcacataggctggaaagacttcactgcatacagatggcgacttagc
catagaccaaagactggctacatcagggttgtaatgtatgaagggaagaaaatcatggcg
gactcaggaccaatctacgataaaacctatgctggtggtcggctaggattatttgtcttc
tctcaagaaatggtgttcttctcagaccttaaatatgaatgcagagattcataa
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integrated database retrieval system
