Oryzomicrobium terrae: OTERR_23400
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Entry
OTERR_23400 CDS
T06190
Symbol
ragB
Name
(GenBank) two-component sensor kinase
KO
K18072
two-component system, OmpR family, sensor kinase ParS [EC:
2.7.13.3
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr01501
beta-Lactam resistance
otr01503
Cationic antimicrobial peptide (CAMP) resistance
otr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OTERR_23400 (ragB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OTERR_23400 (ragB)
01503 Cationic antimicrobial peptide (CAMP) resistance
OTERR_23400 (ragB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otr01001
]
OTERR_23400 (ragB)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
otr02022
]
OTERR_23400 (ragB)
01504 Antimicrobial resistance genes [BR:
otr01504
]
OTERR_23400 (ragB)
Enzymes [BR:
otr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
OTERR_23400 (ragB)
Protein kinases [BR:
otr01001
]
Histidine kinases
OmpR family
OTERR_23400 (ragB)
Two-component system [BR:
otr02022
]
OmpR family
ParS-ParR (polymyxin-adaptive resistance)
OTERR_23400 (ragB)
Antimicrobial resistance genes [BR:
otr01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
OTERR_23400 (ragB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QEL65816
UniProt:
A0A5C1EA84
LinkDB
All DBs
Position
2645581..2647020
Genome browser
AA seq
479 aa
AA seq
DB search
MSAATPDAKPSKPRIRSRLPMLPRGRYSLSRLFFNFYLFVMGSFVLIAFFADIVINTALQ
GITDDYARRFMRGTILLIEEELNRHPAAEWPDTLKRLDDKFSYRLALVKRNQMRLAEAQL
DRLDSGDIAIDNVKDVMYHRLTKHADLVLEVGPLSPDRNPEMKRTIPLELRIRLLTWSII
GVGFGVVAWLWLRPIWRDLESIRETAKSLAEGEFAARAPLPRTRTFALLARTLNGMAERI
QRLIATQKEMSSAISHELRTPIARLRFALDMLGETEERAERERLWAGMEADLDELDTLID
SSLTYARLEREQPEPVLAPVTLRPWLEDQLAAVRPLAGALRLELDAGQLDERQQVAFDRK
VMPFALSNLLRNGVKYAKSGIVIRPELDPASGWVRLHVDDDGIGIPADEREHIFTAFTRL
DRSRDRATGGYGLGLAIARQVMEAHGGSATAGESPEGGARLTLAWPGLAYLTTKDECDG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgccactcccgacgccaagccgagcaaaccccgcatccgcagccgcctgccg
atgctgccccggggccgctactccctgtcccggctgttcttcaacttctacctgttcgtg
atggggtccttcgtcctcatcgccttcttcgccgacatcgtcatcaacacggccctgcag
gggatcaccgacgactacgcgcggcgcttcatgcgcggcaccatcctgctcatcgaagaa
gaactgaaccggcacccggcggcggaatggccggataccctgaagcgcctcgacgacaag
ttttcctaccgcctcgccctggtcaaacgcaaccagatgcgcctggccgaagcccagctc
gaccggctcgacagcggcgacatcgccatcgacaacgtcaaggacgtgatgtaccaccgc
ctcaccaagcacgccgacctggtgctcgaagttggccccctgtcgccggaccgcaacccg
gagatgaagcgcaccattcccttggaactgcgcatccgcctgctcacctggagcatcatc
ggcgtcggcttcggcgtggtcgcctggctgtggctgcgccccatctggcgcgacctggaa
tcgatccgcgagaccgccaagtccctggccgagggcgaattcgccgcccgcgcccccctg
ccccgcacccgcaccttcgccctgctggcgcggaccctgaatggcatggccgagcgcatc
cagcggctgatcgccacgcaaaaggaaatgtcctcggccatctcccacgaactgcgcacc
cctatcgcccggctgcgcttcgccctcgacatgctcggcgaaaccgaggaacgggccgag
cgcgagcggctgtgggcgggcatggaagccgatctggatgaattggacaccctgatcgac
tccagcctgacctacgcccgcctggagcgggaacagccggagccggtcctcgccccggtg
accctgcgcccctggctggaagaccagctcgccgcagtgcgccccctggccggcgccctg
cgcctggagctcgatgccgggcagctcgatgaacggcagcaggtcgccttcgaccgcaag
gtgatgcccttcgccctgtccaacctgctgcgcaacggcgtcaagtacgccaagagcggc
atcgtcatccgtcccgagctggacccggccagcggctgggtacgattgcacgtggacgac
gacggcatcggcattcccgccgacgagcgggaacacattttcaccgccttcacccgcctc
gaccgctcccgggaccgggccaccggcggctacggcctgggcctggccatcgcccgccag
gtgatggaggcccacggtggcagcgccaccgccggcgaatccccggagggcggtgcccgt
ctgaccctggcctggccagggctggcgtacctgacgaccaaggacgaatgcgacggctga
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