KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112214656
Entry
112214656         CDS       T05605                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 6B-like
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112214656
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     112214656
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112214656
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL
Other DBs
NCBI-GeneID: 112214656
NCBI-ProteinID: XP_042183107
LinkDB
Position
LG09:complement(60576933..60728739)
AA seq 2221 aa
MHHAVEQFGGRGTRDSFPLDGLSRGTWAPVGGHVTWAPPARCPTGVNQHQLLPHLPPSHM
GGLNHPSKFFNNGPMQVRGSEKQELAQAMLPGLQRADQQHLPPPPHRAWEQPGQLYESPP
PPHPSVPLPSDHATRLHGGYSPGPPASLPPRPNQLLKYVDPQEQHLLRGPTSLGDDMWAQ
VQQRGYPGKMLGGQLKRPAPPLGEYSVIRHTPHPSSRPNEDCPSPSKRKRSSEQVLHPGI
QRFSGPGGHPLPPQQQPPSHYPPPPPKPAFWNPMHKASGAPRAQPERKNGSPEFQVRAES
VKSCMGGYTYKPPAPSPISPPLTSSPGGYPQRHSGPHPPHKPSFSPQALNQPPTTTPTAL
TRSTLNNQPRPAWGWSPGEVLLPPREALPLGVGESTTIRLLTTTNLQQGGTGTVGSPPNP
HQQTTPACLTATTPTSSPTPGWATLPPTPLPAAQQYLSSTTPVPPTMRPGGPRGRAEHKT
TTPWSWVTTGQGWYLRGSRTRLGRPGVPHPSNTISTPTSAPLRFLPEPPSSSPPQALCSQ
SQNNRYNNSSSITGPALSTVITAPPAVCSANSTCRRGRETMSLPHQSSAASQLERDPERS
PIHPMLHPGYQGAHAGTANHPHRAPPRPQQQQFPSQHHQQSVQGKSYYGRSDPDGTPASS
SSSSSSSFSGHQRAGESVITSRGSHPSPLTQTEVTSSPLHRPMPAHQPHTVSSAPQPASS
PSYSRLCAQPAPQATTTAAKGYLNSRPQPPPPSAPQSMEEALDKLDAELQGHMQAEERRE
REQEERKRREREQEERKRREREQEERKRREREQEERKRREREQEERKRREWEREQEERKR
MEREQGKRRELERVEEEKKRREWEKEQEERKRRDLAREREEEERKMRTELMKEEERRKVE
EEMSRTSKRREESAIESLERLLSGNSSAPPPPRLSTISSFVPPTPSQSSSSPPYPWLSRG
GAPPCPPGQAPPPPAXLEMSRPPPLXPQTEYAREKQRQREMWVKPPSSLHSTNVTSGNNA
LTSSGPFYPNHPSNKTLTQGASPRPSKDTPHPKENDSQQARGGAMGAVDPLHTSSTVTLR
EPPKLFQAFPRDSLSSGPNTSRISSSTSSTGGLPNKRMPSGGLGSLGCSTSSSNSGDSDS
AQFEEEPLELSTLLPDGLANIMAMLDESIKKEEESLYCSDRNGARETIINALSAMPPAKS
YLCAPDLIPAPNQQPQDDFVGTNVHASPPVLSRQGSLASPCSRTSSINEEDEEGCLALKP
ALELHEPAVPLNSDPQSGTNYSHSDLAKLYGLPEPVKSEGDDEDEEDESETPSSSPPPPQ
RPHLHQTGVSSTFKSQAALENQKYAYRGGPFGRPPPSALGGLKYSSSLSLGPDIQQQQNS
TSPTSDSTNHPGFTPSTAPPLKTRPHSPSSWEAKRQVNIKMEEPDIWRDGREAMEKRLHS
TRVESKCYPSTQPIKMELKEEATLTTISESSLAELGRSCEVLLTRHSSSLPRKNPSDRTK
TELKQEGRHHKPERERERHREKERKPGRSKKHGERKEGKKKPREKRDEMSSSSSSSSHSS
SSSSSSKRHRHKEKKDHRRILGNLDLQRKEIREKDRDHVRANMRRKEAGSTSEGETSEWA
SRSRSERSSGVMSASQDRGAGSTLQGSAADFMKLKALSDGPPKELKIRLIKVESGDRETF
IASEVEEKRTPLEEISIENTAAEVIRACKGARVKGKFRESYLLPAFSVKPLFTTEPLPRD
KLNPPTPSIYLESKRDALSPVLLQFCTDPKNPVTVIRGLAGSLRLNLGLFSTKSLVDANS
EHAVEVRTQVQQPADENWDPSGTGQTWPCESSRSHTTIAKYAQYQASSFQESLQEEKGSD
EEAEEDEEDKEKTSKETSPETPSKEPTSKDATSTEQKPVGKIIKFGTNIDLSDPKRWKAQ
LQELQKLPAFMRVASSGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNVNI
GPGDCEWFSVHENYWPAIDDFCEKHGVDYLTGSWWPVLEDLYRSNIPVYRFIQRPGDLVW
INAGTVHWVQAVGWCNNIAWNVGPLNSYQYQLALERFEWNEVKKVKSIVPMIHVSWNVAR
TVKVTDPDTYKMIKHCLLQSIKHIQVLRDQLVAAGKKISYQSRVKDEPAYYCNECDVEVF
DLLFVTSESGSRKTYVVHCEDCARQRNPSLSNNVVVLEQYRMEELMSTYDAFSLTAAPST
R
NT seq 6666 nt   +upstreamnt  +downstreamnt
atgcatcacgcagtagagcagtttggcgggcgtggcacacgggactccttccctctggac
ggactcagccggggaacatgggctcccgtgggtggccacgtcacctgggcgccacctgcc
aggtgtccgacaggtgtcaatcaacaccagctcctaccccatctaccgcccagtcacatg
ggtggactgaaccatcccagtaaattcttcaataatgggcccatgcaggtgcgtggcagt
gagaagcaggagctggcccaggccatgttacctggcctccagagagcggaccagcaacac
ctccctcctccccctcacagggcgtgggaacagccgggtcagctgtacgagtcgcccccc
cctcctcatccatccgtacccctgcccagcgaccacgcgacccgtctgcatggcgggtat
agccccgggcctcccgccagcctgccccccaggcccaatcagctactgaagtatgtggac
cctcaggagcagcatcttctcaggggtccgacatcgctgggtgatgatatgtgggctcag
gtgcagcagaggggttacccagggaagatgttgggagggcagctgaagagaccggccccc
cctctcggggagtactcggtcatccggcacaccccgcacccctcctctcgccccaatgag
gactgccccagtcccagcaagaggaagaggagctctgagcaggttctacacccaggcata
cagaggttctctggcccaggagggcaccccctgcccccacagcagcagcccccgtctcac
tacccccctcctccacccaaacctgctttctggaaccccatgcacaaggcgagtggcgcc
ccccgggcccagcccgaacgcaagaacggttcccctgagttccaggtccgagccgagtca
gtcaagtcctgcatgggcggctacacctacaaacctcccgccccctcgcccatctcccca
cccctcacctcctccccgggaggctaccctcagaggcacagcgggccccacccaccccac
aagccctcattctcacctcaggccctcaatcaaccccccacaacaacccccacagctctc
acccgcagtaccctaaacaaccagccccgccccgcatggggatggagcccaggggaggtc
ctcctaccccccagagaggccctaccactgggggtaggggagtcaacaaccatccgcctc
ctcaccaccaccaacctccagcaaggggggacagggacagtagggagcccccccaaccct
caccagcaaaccacaccggcgtgccttacagccacaacccccacttccagccccaccccg
ggctgggccacactgccccccacccccctgccagcagcacagcagtacctcagcagcaca
accccagtccctcccaccatgaggcctggaggccccaggggcagggcagaacacaaaaca
accaccccctggagttgggtcactacagggcagggctggtacctcaggggcagcagaacc
aggctggggagacccggggtcccgcatccctccaacaccatcagcacccccacatcagct
cccctcaggttcctaccagaacccccgtcatcatctccaccccaggccctctgctcacag
tcccaaaacaaccgctacaacaacagtagtagtattactggacctgcactctccactgtg
atcacagcaccacctgctgtgtgttctgctaacagcacctgtaggagaggcagggagacg
atgtcactgccccaccagtcctcagctgcgtctcagctggagagagacccagagaggagc
cccatccaccccatgctgcacccagggtatcagggagcccacgcgggcactgccaaccac
ccacaccgggcgccacccaggccccagcagcagcagttccctagccagcaccaccaacag
tctgtccaggggaagtcttactacggacggtctgatccggatggcactccggcctcctct
tcatcctcctcctcttcgtcattctcaggacaccagagggcaggggagagcgtcatcacc
agcagggggtctcaccccagccccctcacccagacggaggtcactagctcgcccctgcac
cgccccatgcccgcccaccaaccccacactgtcagctctgccccccagccagcctccagc
ccctcctactccagactctgtgcccagcctgccccccaggctaccaccaccgcagccaag
gggtatctaaattctcgaccccagccacctccaccctcagccccccagtccatggaggag
gctctggataaactggatgctgagctccagggtcatatgcaggccgaggagaggagggag
agggagcaggaggagcggaagaggagggagagggagcaggaggagcggaagaggagggag
agggagcaggaggagcggaagaggagggagagggagcaggaagagcggaagaggagggag
agggagcaggaagagaggaagaggagggagtgggagagagagcaggaagagcggaagagg
atggagagggagcaggggaagaggagagagttggagagagtggaagaggagaagaaaaga
agggaatgggaaaaagagcaagaggagaggaagaggagggatttggcgagggagcgagag
gaagaggagaggaagatgaggactgagttgatgaaagaggaggagaggaggaaggtggag
gaggagatgagccggactagtaaaaggagagaggagtctgccatcgagagtctggagaga
ctcctgtccggcaactcctctgctcctccacctcctcgcctgtccaccatctcctccttt
gtcccacccacccccagccagtcatcctcctcgcccccctacccctggctgagccggggc
ggggctcccccttgtcccccaggccaggcaccaccacctcccgccnccctggagatgtca
cggccgccccctctcnacccccagacggagtacgctagggagaagcagaggcagagagag
atgtgggtgaaacccccctcgtcattacacagtactaacgtcacctcagggaacaacgcc
ctgacctcatcggggcccttttaccccaaccacccctcaaataagaccttgacacaaggt
gcctccccccgcccatccaaagacaccccccatcccaaggagaacgatagtcagcaggcc
cgagggggagcgatgggcgctgtggatcccctccacacctccagcacggtcaccctccga
gagccccccaaactcttccaggcattccccagggatagcctttcgtctgggcccaacacc
tccaggatcagcagcagcacgtccagcacagggggcctccccaacaagcgcatgcccagc
ggaggcctaggcagcctgggttgcagcaccagcagcagtaacagcggcgactccgacagc
gcccagtttgaggaggaacccttggagctctcaacgttactcccggacggtctggccaac
atcatggccatgctggatgagtccatcaagaaagaggaggaatctctgtactgcagcgac
cgaaacggtgctagggagaccatcataaatgccctctctgctatgccgccggccaagagc
tatctgtgcgccccggacctcatcccagcgcccaatcagcaaccgcaggacgactttgtt
gggacgaacgtccacgccagcccccctgtactgagccgacagggctccctggcctccccc
tgcagccggacctcctccatcaacgaggaagacgaggagggttgtctcgccctgaaaccc
gctttggagctccacgagccagccgtccccctcaactccgacccccagtcggggactaac
tacagccacagcgatctggctaaactctatggtctcccggagcctgtgaagagcgagggt
gacgacgaggatgaggaagatgagtcggagaccccgtccagttcccctcccccgccccag
aggccccacctccaccagacaggggtgagcagcaccttcaagtctcaggccgccctggag
aaccagaagtacgcctaccgaggaggtccgtttggccgcccgcccccctccgctctgggg
ggactgaagtactcctcctccctctctctgggtcccgacatccaacagcagcagaatagc
acctcccccacctcggattccaccaatcacccaggcttcacgccgtctacggcccctccc
ctaaagacccgcccacactccccctccagctgggaggcaaagagacaggtcaatatcaag
atggaggagcctgatatctggagagatgggagagaggccatggagaagaggctccattcc
acgagggtggagtccaagtgttatccctctacacaacccatcaagatggagctcaaggaa
gaggccacgcttacaaccatctccgagtcttctctggccgagctgggccgaagctgtgag
gttctcctgacccgacactccagctccctccccagaaagaacccctccgacaggaccaag
actgagctcaaacaggagggcaggcaccacaagcctgagagagagcgggaacgacacaga
gagaaggagaggaaacccggccggagcaagaagcacggggagaggaaagaggggaagaaa
aagccgagggagaaacgagacgagatgtcctcctcctcctcttcgtcctctcactcctcc
tcctccagttccagttcgaagcggcacaggcacaaggagaagaaggaccaccggcggatc
ctcgggaacctggaccttcagcgtaaggagatccgggagaaggaccgcgaccacgttcgc
gccaacatgaggaggaaggaggctgggtccaccagcgaaggtgaaacctccgaatgggcg
tctcgtagtagaagtgaaagaagttcaggagtcatgtccgcttctcaggacagaggggct
ggatctacgctgcagggttcagctgctgacttcatgaagctgaaagccctatcggacggg
ccgcccaaggagctgaagatcaggctgatcaaggtggagagcggcgaccgagagacgttc
atcgcctctgaggtggaggagaagcggacacccttggaggagatcagcatcgagaacacc
gccgcagaggtcatcagggcctgcaagggtgcgagggtgaaggggaagttcagagagtcc
tacctgctccctgcgttctctgtcaagccgctatttactacagagcctctcccacgggat
aaactcaacccccccacgcccagcatctatttggagagtaagagagatgccctctcccct
gtactactgcagttctgtacagaccccaagaaccctgttactgtcatcagaggactggcc
gggtccctacgactcaacctgggtctgttctccacgaagtctctggtagatgctaactct
gagcatgctgtggaggtgaggacccaggtacagcagcctgctgatgagaactgggacccc
agcggcacggggcagacctggccctgcgagagcagccgctcacacaccaccatcgccaag
tacgcccagtaccaggcttcatccttccaggagagtctgcaggaggagaagggtagtgat
gaagaggctgaggaagatgaggaagacaaggagaagacgagtaaggagaccagccctgag
acacctagcaaagaacccacaagtaaagatgctaccagtaccgaacagaaaccagtgggg
aagataatcaagtttggcaccaacattgacctatcagaccccaagaggtggaaggcccag
ctgcaggagctccagaagcttccggccttcatgcgcgtggcgtccagcggcaacatgctg
agccacgtaggtcacaccatcctgggcatgaacacggtccagctctacatgaaggtcccc
gggagccgcacgcctggccaccaggagaacaacaacttctgctctgtgaacgtcaacatt
gggcctggagactgcgagtggttctccgtgcacgaaaactactggccggccatcgacgac
ttctgtgaaaagcacggagtagactacctgaccggttcctggtggcctgttctggaggac
ctgtaccgatccaacatccccgtgtaccgcttcattcagaggcccggggacctggtgtgg
atcaacgcagggaccgtccactgggtccaggctgtgggctggtgcaacaacatcgcctgg
aacgtgggcccactcaactcctaccagtaccagctggccctggagaggtttgagtggaac
gaggtcaagaaggtcaagtccattgtccccatgatccacgtgtcctggaacgtggcccgc
accgtcaaggtcaccgaccccgacacatacaagatgatcaagcactgcctcctgcagtcc
atcaagcacatccaggttctgcgagaccagctggtagcagcagggaagaagatctcctac
cagagccgagtgaaggacgaaccagcttactactgcaacgagtgtgatgtggaggtgttt
gacctgctgttcgtgacgtctgagagtggcagcaggaagacttatgtggtccactgtgag
gactgtgcccgccagagaaaccccagcctctccaacaacgtagtggtgttggagcagtac
cgcatggaggagctaatgagtacctacgacgcattcagcctgactgcagccccgagtaca
cggtaa

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