Oncorhynchus tshawytscha (Chinook salmon): 112215282
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Entry
112215282 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04520
Adherens junction
otw04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112215282
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112215282
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
112215282
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112215282
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112215282
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112215282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Interfer-bind
Tc-R-P
PTP-SAK
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
ICAM_N
SusE
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
112215282
NCBI-ProteinID:
XP_042185054
LinkDB
All DBs
Position
LG10:77450816..77982873
Genome browser
AA seq
1914 aa
AA seq
DB search
MVPNIHPAVPLLPRGAVPSLLLLLSCLVLSTQADSLPSFVKSPEDQTGISGGVASFVCQA
TGDPKPRITWMKKGKKVSSQRFEVIDFDDGCGSVLRIQPLRTHRDEAIYECTAANSGGEI
NTSAKLTVLEENQIPHGFPNIDMGPQLKVVEKTRTATMLCAASGNPDPEITWFKDFLPVD
INSSNGRIKQLRSGALQIENSEESDQGKYECVAMNNAGTRYAAPANLYVRVRRVPPRFSI
PPTNHEVMPGGSVNLTCVAVGSPMPYVKWIMGEIELTKEDEMPIGRNVLEVTNIKESANY
SCVAISSLGQIEATAQVSVKALPKPPTSLIVTETTATSVTLIWDSGNAEPVSFFMIQYRA
KATDAGFQEVDGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETRTGEQAPSSP
PLAVQVRMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDMNNPLSGWQKHNTDDSRLTTIS
GLTTDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELDTRIMLTWLWPV
QDTITKYELQYWEANSDNKIHVTFNPAGSYAVEGLKPDTLYRFSLAARSEFGLGVYTQPI
EARTAQSTPSAPPQEVHLSSLSSTSLKVSWVAPPAASRHGAIVAYTVSYQSTGSASEDPE
RHDVSGIGADASSYVLEGLEKWTEYQVWVRAHTDVGPGPESAPVRIKTKEDVPGAPPRKL
EVEAVNSTAIRVTWKAPLPGKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALPEAQWNIE
ESTEYEATITGLHSETTYSVTVAAYTTKGDGARSKAKVITTTGAVPGRPTMMISTTNSDT
ALIQWQPPKDMVGEMMGYQLQYRLREDTAYTSREFKRTVDHHTVTGLLKGATYVFRLSAL
NRAGTGEAYVKEISTQEDVPSGYPLKLCVTGLTTSTTQLAWDPPALSERNGKILQYVVVY
RDINSHTNSTNRTVDTHMTIQGLKHDTTYDIRVQAFTSRGGGPFSPSIQSRTTSTSPAFA
TSFGVKAVMKTSVLLTWEVPENYKSQVPFKILYNQQSVEVQGNLKRKLITRLQPDTDYSF
VLMSRGNTAGGLQQQVSIRTAPDLLKTKPVLYSTQHNQEGKLTIDLPKVQPTSQVRWYYI
VVVPVSPSSSRRWENPDEMDLEELLESGEGPVLRRKRQVEPTRPYIAAKLPSLPATFTLG
DEKNYNGFYNRPLPGHQRYLAFILAALKEQDTDNSDKHRRFSASPYSDPIHVSPDVSRTA
EQPEMLWVLGPVLAVVLIIVIVIAILLFKSKQERKRASPLPKDDHSGGVKDSLLGNSSDP
VEMRRLNYQTPGMREHPPITVCDLADHIDRLKANDGLRFSQEYESIDPAQQFTWENSNME
VNKPKNRYANVISYDHSRVVLTSVDAVPGSDYINANYIDGYRKQNAYIATQGPLPETLSD
FWRMVWEQRAHTIVMMTRLEEKSRVKCDQYWPVRGTETYGMIQVSMLDTVELATYSVRTF
ALYKNGSSEKREIRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVG
RTGCLIVIEAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYVFIHEALLEAATCGLT
EVPARNLYAHIQKLTQPPTGETVTAMELEFKRLANSKAHTSRFISANLPCNKFKNRLVNI
MPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKGYLATQGPLAETTEDFWRMLWEHNST
IVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSR
TIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLS
IVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggtgccaaacattcaccctgcagttcccctcctgcccaggggggcggtgccatccctc
ctgctgctactcagctgcctggtactctccactcaggctgacagcttaccaagtttcgtc
aagtctcccgaggaccagacgggtatatcgggtggtgtagcatccttcgtgtgccaggcc
acaggagaccccaaacccaggatcacttggatgaagaagggcaagaaagtcagttcccag
cgctttgaggtgattgactttgatgacggttgtgggtctgtgctgaggatccagccgctg
aggacacacagagacgaggcaatatacgagtgtactgccgccaacagtggcggcgagatc
aacactagcgccaaactcaccgtgctagaagagaaccagatccctcatgggttccccaac
atagacatgggtccccagcttaaggtggtagagaagaccaggacggccaccatgctgtgt
gctgccagcggcaaccctgacccagagatcacctggtttaaagacttcctgcctgtagac
atcaacagcagcaacggacgaatcaaacaactccgctcaggagccctacagattgagaac
agtgaggagtcagaccaggggaagtatgagtgtgttgccatgaacaacgctggaacacgc
tacgcagccccagccaatctctacgtgcgagtacgtcgtgtccctccgcggttctccatc
ccacccaccaaccacgaggtgatgcctgggggcagtgtgaacctgacgtgtgttgctgta
ggatctcccatgccctatgtcaagtggatcatgggagaaatcgaactcaccaaggaggat
gagatgcccatcggtcggaatgttctggaggtgaccaacatcaaggagtccgccaactac
agctgcgtggccatatcatcactgggccagatcgaggctaccgctcaggtctccgtcaaa
gccctccccaagccccccacctctctcatagtgactgagaccacagccaccagtgtgacc
ctaatctgggactctgggaacgctgaacctgtgtccttcttcatgatccagtaccgggct
aaagccaccgacgcaggcttccaggaggtggacggagtagctaccactcggtacagcatc
ggcgggctcagcccctactcggaatacgagttccgtgtgatggcggtgaacaacattggg
cgtgggccgccctctgacccggtagagacccgtacgggggagcaggctccctcttcaccc
cctctggctgtccaggtccgcatgctgtctgcttccaccatgttggtccaatgggaaccg
cccgaggaacctaacggacagatcagagggtaccgtgtgtactacagttcagacatgaac
aaccctctgagtggctggcagaaacacaacactgacgacagcagactgaccaccatctca
gggctgaccactgatatcacctacagcctcagggtgctggggttcacctctgtaggggac
ggacctccctctgatgtactgcaggtcaagactcagcagggagttcctgcccaaccatcc
agcttcgaggcagaagcagagttggatactcgtatcatgttgacctggctgtggcctgtc
caggacaccatcactaagtacgagctacagtactgggaggctaactctgacaacaagatc
cacgtgacttttaatcctgcggggtcatacgccgtggagggtctgaagcccgacaccctg
taccgtttctccctggcagcccgttccgagttcggcctgggagtctacacacagcccata
gaggctcgcaccgcccagtccaccccctccgccccccctcaggaggtgcacctgtccagt
ctaagctccacctccctcaaggtgagttgggtggctccgcccgctgcgtcccgccacggc
gccatcgtggcgtacaccgtcagctaccagtccaccggcagcgccagcgaggaccccgag
cgccacgatgtgtcggggatcggagcagacgcctctagttatgtgctggagggcctggag
aagtggacagagtaccaggtgtgggttagagctcacactgatgtgggcccgggcccagag
agcgctccggtcaggatcaaaactaaagaggacgtgccaggtgcccctcccaggaagctg
gaggtagaagctgtgaactctacagccatcagggtaacgtggaaggcccccctgccaggg
aagcagcacggccaaatcaggggctaccaggtcatcttctccaggctggagaacggggag
ccacgcggtcagcccaacatcatggacgtagccctgcctgaggctcagtggaatattgag
gagtccacagagtatgaggccaccatcactggtctgcactccgagaccacctactctgtt
accgtggcagcctacacaaccaagggagacggggcgcgcagcaaagctaaagtcatcacc
accaccggagcagtcccgggtcgccccaccatgatgatcagcaccactaacagtgacacc
gccctgatccagtggcagcctcctaaagacatggtgggagaaatgatgggctatcagctg
cagtacagactccgagaggacacggcttacacctcacgggaattcaaacggacggtcgac
caccacaccgtcaccggacttctcaagggcgccacctacgtgttccggctgagtgcgttg
aaccgcgccggtaccggagaggcctatgtcaaggagatcagcacgcaagaagatgtgccc
agcgggtaccccttaaaactctgcgtgacagggttgaccacgtcgaccacccagctggcg
tgggatcctccagcgctgtctgagaggaacgggaagatattgcagtatgttgtggtgtac
agagacatcaacagccacaccaacagcaccaacaggacggtggacacacacatgaccata
cagggactgaaacatgacaccacctatgacatcagagtccaggcgttcaccagtagagga
gggggacccttcagtcctagtatacagagcaggacaacatctacctcacctgcgtttgcc
acaagcttcggcgtcaaagccgtcatgaaaacatcagtcttgctcacgtgggaagtgcca
gaaaactacaagtcccaagtgcctttcaagatcctgtataaccagcagagtgtggaggta
caggggaacctgaagaggaagttgatcacccgactacagcctgatacagactacagcttt
gtgttgatgtccagaggaaacactgccggcggtcttcagcagcaggtgtccatcaggacc
gccccagacctcctgaagactaaacctgtcctctactctactcagcacaaccaggagggg
aagctcactatagacctgcctaaagtacagcctactagtcaagtcagatggtactacatc
gtggtggtgcctgtgtccccgtcgtcgtcacggcgatgggagaaccccgacgagatggac
ctggaggagctgttggagtctggcgagggtcctgtcctgcgtcgcaagcgccaggtcgag
cccacgcggccgtacatcgccgccaagctgccctccctgcccgctacgttcaccctggga
gatgagaagaattacaacggcttctacaaccgtcccctgccgggtcaccagcgctacctg
gccttcatactggctgcactgaaggagcaagacacggacaacagtgacaaacatagaagg
ttctcagccagtccttactccgaccccatccacgtgtctcctgacgtgtccaggactgca
gagcagccagagatgttgtgggtcctgggtcctgtcctggccgtggtgctcatcatcgtc
atcgttatcgccatcttgctcttcaagagcaagcaggaaaggaagcgagcatctcccctc
cccaaagatgaccactcaggaggggtgaaggactcactgctgggcaactcttccgaccct
gtagagatgagacgactcaactaccagacaccaggaatgagagagcaccctcccatcact
gtgtgtgatctggcggaccacatagacaggctaaaggccaacgatggcctgcgcttctcg
caggagtacgagtccatagatcctgcccagcagttcacctgggagaattccaacatggag
gtgaacaaaccaaagaaccgctatgctaatgtcatctcatacgaccactccagagtcgtc
ctgacgtctgttgatgctgttcctggtagtgactacatcaacgccaactacatagacggc
tacaggaaacagaatgcctacatcgctacgcagggccctcttcccgagaccctcagtgac
ttctggaggatggtgtgggagcagagggctcacactatcgtcatgatgacacgactagag
gagaagtcacgtgtgaagtgtgaccagtactggcctgtcagagggacagagacctatggt
atgatacaggtcagcatgttggatactgtggagctggctacctacagcgtacgcaccttc
gctctctacaagaatggttccagtgagaagcgtgagattcgtcagttccagttcatggcc
tggccggaccacggggtaccagagtaccccacccctatcctggccttcctacgacgggtc
aaagcctgcaacccccctgacgctgggcccatggtggtacactgcagtgcgggcgtgggt
agaacaggctgcctgatcgtgatcgaggccatgctggagcgtatgaagcatgagaagtcg
gtggatatctacggtcatgtgacgtgtatgagagctcagaggaactacatggtgcagact
gaggaccaatatgtctttatccacgaggccctgctagaggcagccacctgtggcctcact
gaggtccccgcacgcaatctgtacgcacacatccagaaactcacccagccgcccacaggg
gagaccgtcaccgccatggagctggagtttaagagactggctaactccaaagcccacacc
tccaggttcatcagtgccaacctgccctgcaataagttcaagaaccggctggtgaatatc
atgcccttcgagtcgacacgcgtgtgtctgcagcctatcagaggagtggaggggtcagac
tacatcaacgccagctgcatcgatgggtacagacaacagaaagggtatctggccacccag
ggccctctggctgaaaccactgaagacttctggaggatgctgtgggaacataactctacc
atagtagtgatgctcaccaaactcagagagatgggccgggagaagtgtcaccagtactgg
ccagcggagcgttcagccaggtaccagtactttgtagtggaccccatggctgagtacaac
atgccccagtacatcctccgagagttcaaagtcaccgacgccagggatggccaatccagg
acgatccgccaattccagttcactgattggccagaacaaggagtgccaaaaaccggggaa
ggattcatcgatttcattggccaagtgcataaaaccaaggagcagtttggacaggacgga
ccaatcactgttcactgcagtgccggggtgggcaggacaggggtcttcatcactctgagt
atcgtgttggagaggatgaggtacgaaggggtggtggacctattccagaccgtcaagacg
ttacgcacccagagacctgccatggtgcagacagaggaccagtatcagctgtgctacaga
gcagctttggagtacctggggagttttgaccactatgcaacgtaa
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