Oncorhynchus tshawytscha (Chinook salmon): 112216271
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Entry
112216271 CDS
T05605
Name
(RefSeq) caspase-9 isoform X1
KO
K04399
caspase 9 [EC:
3.4.22.62
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04115
p53 signaling pathway
otw04210
Apoptosis
otw04370
VEGF signaling pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
112216271
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112216271
04115 p53 signaling pathway
112216271
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112216271
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112216271
01002 Peptidases and inhibitors [BR:
otw01002
]
112216271
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.62 caspase-9
112216271
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112216271
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C14: caspase family
112216271
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
CARD
MM_CoA_mutase
Motif
Other DBs
NCBI-GeneID:
112216271
NCBI-ProteinID:
XP_024231908
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All DBs
Position
LG16:complement(71547223..71562167)
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AA seq
423 aa
AA seq
DB search
MYHGLLSKGIFTQDMIDEIKSSGIRQGQARQLVRDLETRGSLAFPALIECLHETGQHSLA
ELLLDGEPQNQPLPQPVHVRPVVRPLPVYSPMDTVKPVQVVTPVYPTQSVKPMPTTPIPC
TVARKTPEREFGKPRATGRVRHDSIQSYKMDANPCGHCLIINNVDYEPKSVLSKHTGSNI
DCEKLERRFKSLNFIVLVKRNLKQKQIKQELSALSKKDHSQYDCCVVIMLSHGTEVCNNR
FPGAVDGPNVPVQHITNYLNGQNCLSLQGKPKIFFIQACGGGERDTGFEVSPDKARPCIG
GTGDQTDAMPMSSSSDSLSTQSDEPDAKATLPTASDILVSYSTFPGYVSWRDTQAGSWYV
ETLDNMLEENAATDDLVTMLMMVNHEVSEYTANGLYKQMPGSFNFLRKLLYFQALPCQRP
IVS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatggacttctgtcaaaaggaatatttactcaagacatgatcgacgagattaag
agctcagggatcagacaaggccaggccaggcagttggttcgagacctggagacccgcggg
agtctggcgttcccagctttaatagagtgccttcatgagacagggcagcatagtttagca
gagctcctactggatggagaaccacaaaaccagcctctacctcagcctgttcatgtccgg
ccagtcgttaggcctttaccagtttactcacctatggacactgtcaagcctgttcaagtg
gtaacccctgtctatccaactcaatcagtgaagcctatgcccaccacacccattccatgt
acagtggcaagaaaaacccctgaaagggagtttggaaaacccagggcaacaggaagagtt
agacatgacagtattcagagttataagatggatgccaacccctgtggacactgcctgatc
ataaacaatgtcgattacgagcctaagtcggtgctgagtaagcacacagggtccaacata
gactgtgaaaaactggaaagaagattcaaatctctgaactttattgttcttgtcaaaaga
aacctgaaacaaaagcaaataaagcaggagctttcagctttgtccaagaaggatcattca
cagtatgactgctgtgtggtgatcatgttatcacatgggacggaggtgtgtaacaatcgc
ttccccggtgcagtggatgggcccaatgtcccagttcagcacattaccaactacctgaac
ggtcagaactgtctttccctacagggcaagccaaagatcttcttcatccaggcctgtggg
ggaggtgagagagacacaggctttgaggtgtctcctgacaaggcgaggccttgtattgga
ggaacaggtgaccagacagatgcaatgcccatgtcctccagcagtgactctctgagcact
cagtctgatgagccagacgcaaaggccacactacccacagccagcgacatactggtgtcc
tactccaccttcccaggttatgtctcctggagagatacccaggctggctcctggtatgta
gagacactggataacatgttggaagagaatgctgccaccgatgacctggtcaccatgtta
atgatggtaaatcatgaagtttcagaatacacggccaacggcctctacaaacagatgcct
ggttcctttaactttctacgcaaacttctctacttccaagccctgccctgccagagacca
atcgtgtcatga
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