Oncorhynchus tshawytscha (Chinook salmon): 112216294
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Entry
112216294 CDS
T05605
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04514
Cell adhesion molecule (CAM) interaction
otw04620
Toll-like receptor signaling pathway
otw04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112216294
04514 Cell adhesion molecule (CAM) interaction
112216294
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112216294
04672 Intestinal immune network for IgA production
112216294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
otw04050
]
112216294
04090 CD molecules [BR:
otw04090
]
112216294
Cytokine receptors [BR:
otw04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
112216294
CD molecules [BR:
otw04090
]
Proteins
112216294
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Vpu
Motif
Other DBs
NCBI-GeneID:
112216294
NCBI-ProteinID:
XP_024231950
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All DBs
Position
LG16:complement(72438555..72444755)
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AA seq
352 aa
AA seq
DB search
MLGCFKTKRIEIFTLLFMLAVFPAVYSCDPATQYDNNGECCNKCGPGTRMSSDHSGCFDP
HCMPCQENEYQEAFTEKIICEVQPYCDQNKNFEGSTNRSKTSLSQCICKAGHHCSSKECL
TCVPHTKCGPGQETLYTGDHIRDTVCQACPANTFSSDSSAESKCKQWTVCDKESKTEANG
TSTSDIVCVLVPTFSGRIAGCSLVIVALVTSVVGIILWKYKGKHGEAYKKGKEPCVECLG
WERRPTEDRNNEGRNSEGPDEEREQLKPMIQNGKPLSPPSPGTQTPVENDVNDSQAESSA
KAEEMTENGHVVAQEQGKQHNTYLSDPQMVSHNHSALPSAEHNIQLSDCALP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgttgggttgtttcaagacgaaaaggatcgaaatttttacgcttttatttatgctggcg
gttttccccgcagtttactcctgtgatccagcaacacagtatgataataatggggagtgt
tgtaataagtgtgggccaggcacaaggatgtcatccgaccatagtggttgttttgatcca
cattgtatgccctgccaagagaatgaataccaggaagcattcacagagaagatcatctgc
gaagtgcaaccatactgtgaccaaaataaaaactttgagggcagtaccaataggagcaaa
acaagcctcagccaatgcatatgtaaggcaggacaccactgttccagtaaagagtgcctg
acatgtgtaccacacactaaatgtggaccaggacaagagacactttacaccggtgaccac
atccgggacacggtgtgtcaggcctgtcctgcaaacaccttctccagcgacagctcagca
gagagcaagtgcaagcaatggacagtttgtgacaaagaatccaaaactgaagccaatggg
acatccacctctgacattgtctgtgtgttagtacccacattctctggaagaatagcagga
tgttcccttgtgattgttgcattggtcacgagtgttgtgggcattatcctgtggaaatat
aaaggtaaacatggagaggcctacaagaaaggaaaggaaccctgtgtggagtgtctaggg
tgggagaggagacctacagaagacagaaacaatgaagggagaaactcagaaggacctgat
gaggaaagggaacaactcaaacctatgatccaaaatggaaagccactatcaccaccatca
ccaggtactcaaacaccagtggagaatgatgtcaacgactctcaagccgagtcttctgcc
aaagctgaagagatgacagaaaatggacatgtggtggcgcaggagcagggtaaacaacac
aatacttatttgtctgatccacaaatggtatcacataaccactcggctttacccagtgcc
gaacacaatatacaattgtcagattgtgcattaccatga
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