Oncorhynchus tshawytscha (Chinook salmon): 112216357
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Entry
112216357 CDS
T05605
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00600
Sphingolipid metabolism
otw00604
Glycosphingolipid biosynthesis - ganglio series
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112216357
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
112216357
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112216357
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
112216357
Glycosyltransferases [BR:
otw01003
]
Glycan extension
Glycolipid
112216357
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_transf_64
Motif
Other DBs
NCBI-GeneID:
112216357
NCBI-ProteinID:
XP_024232062
UniProt:
A0A8C8D494
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All DBs
Position
LG16:complement(75729898..75755011)
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AA seq
531 aa
AA seq
DB search
MMRCLVQKKTYLVILSPLLLFALLRYWTRRATTTVDVGPGQSYKAQKVLKERLQNVQNSY
DNIPYVLKESVAGRLALNVCVCEADKKPAIDLPFAQVLFPRVWAQDDFHTAFQEAELAQV
KSRRQQEYNSFQQRYQTPADLLVIAEANSPLQYPTQGVEVRPLKTIVIPGLGLKEKHRQL
HTVNLTATLGIFDVLATVDGVSIRGQGVMHMTLSSRLLSTLNRQLQFVTYTNTLFHPRTA
DTVQFETDGHQSVFTIKVGHAVIPKLYHSGYTGEYNISSLVTIATKTFLRYDKLQDLIDS
IREFYPTVTIVIADDNEHPQPVMGPHIEHYIMPFGKGWFAGRNLAVSQVTTKYVLWVDDD
FLFTSNTRLENMVEILEKTTLDMVGGAVREATGYTATYRHTISVEEGGEEGDCIHIRNGY
HHVIEGFPNCVLADAVINFFMGRTDKMQQVGFDPRLNRVAHLEFFIDGLGILHIASCDDI
IINHASKIKLPWGKSHSEKAYAKFRYSSSDAVQIKNALFYFKNRLKCMSSN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctgcctcgttcagaagaaaacatacctcgtcattttatctccactgctactg
ttcgccctcctccgctactggactcgaagggccaccaccactgttgacgtgggaccaggc
cagagctacaaggcacagaaggttctgaaggagaggctgcaaaatgtccagaatagttat
gacaatatcccatatgtcctgaaggaaagtgtggcagggcgtctggcactgaacgtgtgt
gtgtgtgaggcagataagaagcctgccatcgacctgccttttgcccaagtgctgttcccc
cgtgtctgggcccaggatgacttccacacagccttccaggaggcagagctggctcaggtg
aaaagtcgcaggcagcaggagtacaacagcttccagcagaggtaccagactcccgcagac
ctccttgttatagcagaagccaacagtcccctacagtaccctacccagggggtggaggtt
cgccctctcaagactatcgttatccctgggttgggtctgaaagaaaagcatagacagctt
catacagtgaatctgactgctaccctggggatatttgatgtgttagccaccgtagacggg
gtctccattagaggacagggagtgatgcacatgactttgtccagtagactcctctccact
ctgaacagacagctacagtttgtcacctacaccaacaccttgttccaccctaggacggct
gacacagtgcagtttgagactgatggacaccagtccgtttttaccataaaggttggacat
gctgttattcccaagctctatcactcaggttacactggagaatacaacataagctcactt
gtcaccatagctaccaagacatttctgcgttatgacaaactgcaggatctgattgacagc
atacgggagttctatcccaccgtcaccatagtgatagcagatgacaacgagcacccccag
ccagtgatgggtccacacattgaacattacattatgccgtttgggaagggttggtttgca
gggaggaatctggccgtctctcaggtgaccaccaagtatgtgctgtgggtggacgatgat
ttcctcttcacctccaacaccaggctggagaatatggtggagatcctggagaagaccacc
ctggacatggtgggtggtgctgtgagagaagctacaggctacactgctacttaccgccac
accatctcagtggaggaagggggtgaggagggggactgtatacacatcagaaatggatac
catcatgtcattgagggctttcctaactgtgtcctagccgacgctgttatcaacttcttc
atggggaggacagacaagatgcagcaagtgggattcgatcctcgtctgaaccgtgtggct
catctagagttcttcatcgacgggcttgggatcctccacatagcttcctgtgatgacatc
atcataaaccatgcatcaaagatcaagttgccatggggcaagtcgcacagtgagaaggcc
tacgccaagttccgctactcctcatcggatgctgtccaaatcaaaaatgcccttttttac
ttcaagaacagactcaaatgcatgtctagtaactga
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