Oncorhynchus tshawytscha (Chinook salmon): 112216488
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Entry
112216488 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: vascular endothelial growth factor receptor 1-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
otw04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112216488
04020 Calcium signaling pathway
112216488
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112216488
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112216488
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112216488
Protein kinases [BR:
otw01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
112216488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
VEGFR-1-like_Ig-like
Ig_2
ig
VEGFR1-3_N_Ig-like
V-set
VEGFR-2_TMD
Ig_VEGFR-1-like_5th
Ig_4
C1-set
Motif
Other DBs
NCBI-GeneID:
112216488
NCBI-ProteinID:
XP_042154572
LinkDB
All DBs
Position
LG16:16400933..16500174
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AA seq
1959 aa
AA seq
DB search
MICFIFVVLCGLSGSALAKGKVDREPKGKFSVPVLDVKSRQLVLEANQTLTIHCRGRWEL
SWVFPGGVARDKESVQLEDSRCGRQSQHYCSQLIISSAQAPHTGSFRCRYSQRTRRQSAV
YIYVTDRQRPFVEEQNNSPDVVYIKESQPLVFPCRVTHPDATVSLVKFPDRELTPDQRNI
VWNSRQGFLIRSPTYFYIGLFSCKTSVNGTTHSLSYLTHRQVNKIMEVYLNSTSPVQTLQ
GDSLAINCTVTAEWNSRVSISWDYPGQVNRAAIISRRIMASKTHMVFYSILSIPKLHRSD
RGLYICRVTSGPVSRETNVSVTVYDRPYIRLTPRQGAIVEAQAGQKSYRLSPKLRAFPAP
EIIWLKDGKVAAEQCSRYHVDGNSLVIRDVAKEDAGKYTILVGIQEHRLYQNLTLSLVVN
VSPGIGEKAVSLQDPGSVPQGSRQALHCSSHGVPPPHIAWLWHPCPPKGLCDKPPPTLWS
LVRERAPSTSTQNHILXHRQEVLQGKNKTVGILMVAELFVSAVYRYVPGGFGVKQEEELR
EGGDLTCVANKQLYTKLSWQLVTDTAEPSNLSHWFSDTQLPRPRRVPHPLITWYKDQHSL
LQDSGGGTLHIDRITVKEQGLYTSQATNERGSAVGSTYIWVQNSSEGLSLKILTLTCTCL
VATLFWLLLTLFICKLKHPFLSQAKSEYLSIILDPDKGPPEEQCDRLQYDPSQWEFPETA
SNRVYLYTIEEPLDHEAFGKVMQVSAFGIYNSTGCGTVAVKMLKGVLEGKQCAPNGVLEG
KQCAPNGVLEGKQCAPNGVLEGKQCAPNGVLEGKQCAPNGVLEGKQCAPNGVLEGKQCAP
NGVLEGKQCAPNGVLEGKQCAPNGVLEGKQCAPNGVLEGKQCAPNGVLEGKQCAPNGVLE
GKQCAPNGSGFRQSHPAACVWGAAGALQGASGSRLLQLLEGTPMPVKGNSRVLIAALLLL
FARCDGNASQPQGDSPRAHCITSLEGRLCTLSETHLNGSGPTRLEVPAGQRLLITMQSLP
GDPVCSWSHGADPKSRGYSLTILQTHVSDSGEYTFSCERGGINSSLTLSLLVIPLLRLPT
KPHLKFIPGKRGFLPDYQCSSEGNPKPKIKWFNNLDKTGKGNDGTDIPSTIKERANNKEK
SKNYYRTTVMCCASNSQGEACSQLYDYDLDRASDEDDEAPEITVSPGQPLLLSCRQKENS
TAQWLPDNPRQVSIYQLTYKEIYMTYLFIESVTVNHSGIYTCRGNKNKVKSTHVQVLEKG
FISIDQLNESSTISAQEKPGFCLRALVSSHPLLRCHWLGPDSRQTQCPEPTRLWKSRTLE
LCNTEPGEYQLHLEAGELNLTQTLSLCVAGTSTPSLLQNGDNITCETNTPLPFNLTWSSC
SLTNDSCQSESAAWKEIPAPPPKLSDSDQFCHKRILSTRDSTEVGDFVKCCITNSVHSQS
HCSETLFNIQFKSVPPASSQLLLKVSSLVLFLALMLVSLALLYFIRKKKPQYQSQLQMIQ
MVGPNDNDYIYINFKDFQYDQKWEFPRENLELGKELGSGAFGMVLQATAYGISKPGVSLQ
VAVKMLKEKHETVEKEALMSELKMLTHIGQHANIVNLLGACTGSGPTYLIFQYCRNGDLL
NYLKNNRELYHKSLTDAFTRDRFSRLYHNLPKRSSSEFQRPVDSIYIPMSPTTTRGQESI
ALISLNSSPMNTSDGPGMYEELNELQEEEEEEEEEALTYDDLLSFSYQVAKGMDFLSSKH
CIHRDLAARNVLVTQGGLVKIGDFGLARDIDNDSNYVVRGNVRLPVKWMAPESIFQGMYT
MQSDVWAYGILLWEVFSLGVTPYPGIKVDNNFYVMIERGFKMEQPYYASESVYSIMCKCW
ALEPRDRPHFSKLVAFMDDQLADMEEKLYHNILDKRCSHVLYQNAPVKSDLSALAKEKGH
QAQSQNQYCKTHSTGEAPTTLSDRVAMETDDDNPLKPCQ
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgatttgctttatcttcgtggttctatgtggattgtctggcagtgcgcttgcaaaaggt
aaagtggatagggagcctaaggggaagttcagtgttcctgttctggatgtgaagagtcga
cagctggtcctggaggccaaccagacgctgacgatccactgcaggggtcggtgggagctg
tcgtgggtgttccctggaggtgtggccagagataaagagagtgtgcaattggaggattct
cgctgtgggaggcagagccagcattactgcagccaactgattattagctcagcccaggcc
ccgcacacaggatcattccggtgtcggtatagccagcggacccgcaggcagagtgctgtc
tacatctatgtcacagacagacagcggccatttgtggaggagcagaataacagtccagac
gtggtgtatatcaaggagagccagcctctggtcttcccctgtagggtcacccaccctgac
gccaccgtgtcattggtcaagttccctgaccgtgagttgaccccagaccagaggaacata
gtgtggaacagcagacagggcttcctcatccgcagtcccacctacttctacatcggcctg
ttctcctgcaagacctctgtcaacgggaccacacactccctcagttacctcacacacaga
caagtgaataagattatggaggtgtatctgaacagtactagtcccgtccagactttacag
ggggacagtctggccatcaactgtactgtcactgcagagtggaacagcagagtgtccatc
agctgggactaccctgggcaggtaaaccgggcagccataattagtaggcgtatcatggcc
agtaaaactcacatggttttctacagtattctgtccatccctaaactccaccgctctgac
agagggctctatatctgccgagtgaccagtggaccggtcagccgagagactaacgtgtct
gtcacagtctacgaccgtccgtatatccgtctgacacccagacaaggggctatagtggag
gctcaagcaggacagaagtcctaccgactctcccctaaactacgggccttccctgcccca
gagatcatctggttgaaggatgggaaggtagcagcagaacagtgttcccgttaccatgtg
gatgggaattccctggtgatccgggatgtggcgaaggaggatgcagggaagtacactatc
ctggtgggaatccaggagcacagactctaccagaacctaacgctctctctggtggtcaac
gtgagtcctgggataggggagaaggcggtgtccttgcaggacccaggtagtgtcccgcag
ggcagcagacaagccctgcactgcagctcccacggagtcccccctcctcacatcgcctgg
ctctggcacccctgcccccccaaaggcctctgtgacaaaccccctcccacactatggagc
ctggtgagagagagggcccccagcacgtccacacagaaccacatcctancacacagacag
gaagtgctccaggggaagaataagaccgtggggattttgatggttgctgagttgtttgta
tccgcagtgtatcgctatgtcccaggaggcttcggtgtgaaacaggaggaggagctaaga
gagggaggagacctcacttgcgtagccaataaacaactgtacaccaagttgtcatggcaa
ctggtgactgacacagcagagccctctaacctctcacactggttcagtgacactcagctg
cctcgcccacggcgtgtgccacaccccctcatcacatggtacaaggaccaacactctctt
ctgcaggactcaggaggcgggaccctccacattgaccgaatcacagtgaaggaacagggt
ctgtacaccagccaggccaccaatgagagaggctctgctgtgggctccacctacatctgg
gttcagaactcgtcagagggcctgtctctgaagatccttactctcacctgtacctgtctg
gtggccactctcttctggctgctgcttactctcttcatatgtaaactcaaacatccattt
ctctctcaggcaaagtcagagtacctgtcaatcatcctggacccggacaaggggcctccg
gaggagcagtgtgatagactacagtacgaccccagccaatgggagttcccagagactgcc
tcgaacagggtatacctttacaccattgaggaacctctggaccatgaggcctttgggaag
gtcatgcaggtgtctgcctttggcatctacaactctacaggctgcggaactgtggctgtc
aagatgctcaaaggtgtcctggagggcaagcagtgtgcacctaatggtgtcctggagggc
aagcagtgtgcacctaatggtgtcctggagggcaagcagtgtgcacctaatggtgtactg
gagggcaagcagtgtgcacctaatggtgtcctggaaggcaagcagtgtgcacctaatggt
gtcctggagggcaagcagtgtgcacctaatggtgtcctggagggcaagcagtgtgcacct
aatggtgtcctggagggcaagcagtgtgcacctaatggtgtcctggagggcaagcagtgt
gcacctaatggtgtcctggagggcaagcagtgtgcacctaatggtgtcctggagggcaag
cagtgtgcacctaatggtgtcctggagggcaagcagtgtgcacctaatggtgtcctggag
ggcaagcagtgtgcacctaatggttcagggttcaggcagtcccaccccgctgcctgtgtg
tggggggcggcaggggcgctacagggggccagtggcagccgcctgctgcaactcctggaa
ggaacaccaatgccagtgaagggaaatagcagagttctcatcgctgcgctcctgttgctg
ttcgcccgttgtgatggaaacgcgtcgcagcctcagggagactcacctcgagcgcactgt
atcaccagcctggagggacggttgtgtactctgtctgaaacccatctgaatggttctggt
cctaccagactagaggtccctgctggacagaggctcctgatcaccatgcagagcctccca
ggagaccctgtctgcagctggagccatggagctgacccaaaaagtaggggctattccttg
accatactacagacacatgtgagtgattctggagagtacacattcagctgtgagagaggc
gggatcaactcctctctgaccctctctctactggtcatacctctgctaagacttcccaca
aaaccacacctgaaatttatccctgggaaaagaggcttcttaccagactatcagtgttct
tcagagggaaaccctaagcccaagatcaaatggttcaacaaccttgacaagactggaaag
ggtaatgatgggacagacattccctccacgatcaaagagagggctaacaacaaagagaaa
agtaaaaattactacaggacaacagttatgtgctgtgctagcaattctcagggagaggcg
tgttctcaactatatgattacgatctggaccgtgccagtgatgaggatgatgaggctcca
gagatcactgtgagtcctgggcagcccctgctgctcagctgtcggcagaaagagaacagc
accgcacagtggctgcctgacaacccgagacaagtctccatatatcaactcacatataaa
gaaatatatatgacctacctgttcattgagtcggtgacagtgaaccacagtggaatctat
acatgccgaggcaacaagaacaaggtcaaatccacccatgtccaggtcctggagaagggc
ttcatttccatcgaccagttgaatgagagcagtaccatctcagcccaggagaagccaggg
ttctgtctgcgggccctggtctcctcacaccctctcctacgctgccattggctgggcccg
gacagcagacagacccagtgccctgagcccacacggctctggaagagcaggactctggag
ttgtgtaacacagagccaggagagtatcagttacacctggaggctggggagctgaacctc
acacagaccctctctctgtgtgtggcaggtacatccacccccagtctcttacagaatgga
gacaatataacctgtgagaccaacaccccccttcccttcaacctcacctggagctcctgc
tctttgaccaatgacagctgtcagtcagagtctgcagcctggaaggagatccctgcccca
cccccgaagctctctgactcagaccagttctgtcataagaggatcctcagtacccgggac
agtacggaggtgggggactttgtcaagtgctgcatcacaaactctgtccactcacagtct
cactgcagtgagacactgttcaacatacaatttaaatctgttccaccagcctcatctcaa
ctcctcctgaaagtgtccagtctggtcctgttcctggctttgatgctggtcagcctggcg
ctgctctacttcatcaggaagaagaaaccccagtaccagagtcagctgcagatgatccag
atggttgggcctaatgacaacgactacatctacatcaacttcaaagacttccagtatgac
cagaaatgggagttccccagagagaacctggagctggggaaggagctgggctctggggcc
tttggcatggtgcttcaggctacagcctacggcatcagcaagccgggagtctccctgcag
gtggctgtcaagatgctgaaagagaagcatgagacagtagagaaggaggctctgatgtca
gagctgaagatgctgactcacatcggacagcatgccaacatcgtcaacctgctgggggca
tgcactggctcagggcccacgtacctgatatttcagtactgccgtaacggggacctgctg
aactacctgaagaacaacagagagctctaccacaagtctctgaccgacgccttcaccagg
gaccgcttcagcagactttaccacaacctgcccaagaggagctccagtgagttccagagg
ccagtggacagcatatacatccccatgtcccccaccaccactagagggcaagagagcatc
gccctgatcagcctcaactcttctcccatgaacacctctgatggtccagggatgtatgag
gagttaaatgagctgcaggaggaggaggaggaagaggaggaggaggcgctgacctacgac
gacctgctcagcttctcctatcaggtggccaagggcatggacttcctgtcctccaaacac
tgtatccatcgggaccttgctgccaggaacgtgttggtgactcagggtggactagtaaag
atcggggactttggactggcccgggacatcgacaatgactccaactacgtagtgagagga
aatgtgcgtctgccagtgaagtggatggctccagagagtatcttccaggggatgtacacc
atgcagagcgatgtctgggcctatggtatcctgctgtgggaggtcttctctctgggtgtg
accccctacccagggataaaggtggacaacaacttctatgtgatgatagagagaggtttt
aagatggagcagccgtactacgccagtgaatctgtgtattcgatcatgtgtaagtgctgg
gccttggagcctcgggaccgccctcacttctccaagctggtggccttcatggatgaccaa
ctggccgacatggaggagaagctctaccataacatcctggacaagcgctgcagtcatgtg
ttataccagaatgcaccggtgaaatctgatctctcagccttggccaaagaaaagggtcat
caagcacagtcacagaaccaatactgcaagacccactccactggagaggccccaacaaca
ctgtctgacagggttgccatggagactgatgatgacaatcctctgaaaccatgtcagtga
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integrated database retrieval system
