Oncorhynchus tshawytscha (Chinook salmon): 112217164
Help
Entry
112217164 CDS
T05605
Symbol
bbs10
Name
(RefSeq) Bardet-Biedl syndrome 10 protein isoform X1
KO
K19401
Bardet-Biedl syndrome 10 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112217164 (bbs10)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
BBS-CCT complex
112217164 (bbs10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Zip
Motif
Other DBs
NCBI-GeneID:
112217164
NCBI-ProteinID:
XP_042156112
LinkDB
All DBs
Position
LG17:complement(11601386..11605824)
Genome browser
AA seq
676 aa
AA seq
DB search
MGMRLQPRCLQLDSVLQTVSVLEAVIRRSFGPDGGQVLFTRDTGQTLLTRHGTRILTALR
VEHPLARMVVECVRRHSSVTGDGSKTFVLLLASLLREIQKHTRKARQEGAGAKRLAEALL
AFGLDELSDVITVAVAPHGSSLSDPHTPGQTDTHTLCRLLSAFLHTRISPTHAEIISQLT
CELLSHWSCHGDFINEHFPALHTAVSGFPIGCSRLLEGQVIHADFSTPLPLRDHRPIRAL
AVTEPLEPSLLIDGTVLELGGANREIESVCVRLGRRLDSVCVILQHLGVSLLLSSVRQSE
AFLAAVGRYGVCVLECVCEDDLTLFSVLSGAQPVSDWAVIGQEHVATVTFCRPLVLGAHR
YGNRIVTHTHTHTHYSNYVVFSPRFVNVGFPKAEDRGRPHSLVVCGLTEGQTEQSVCAVR
DALHMLHTTWGPKHRTRATERTARTDVMEPCVISVGGTFEFLLHHTLLQRKHGQTHSVTH
SHTHTLSHTDMHTLSHTDTHTLSHTDMHTLSHIDTHTPSHTDTHTQSNADTHTLSHLDNP
AVSGMLAEALLSVPRQIYSHNPRHYLEAHAHTLSCMRNHGNSTDLPEISAVLAADGSNMV
QADTGSGSGSGSGVKEVTVWSSSGSSSGVESVSCKYQLILAVLQCLRSLLSVDTVLHANT
SHTLSHACQREEEEGD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcggttgcagcctcggtgtctgcagctggactccgtactgcagacagtgagt
gtcctggaggctgtgatccggaggagctttggtcctgatggaggacaggtgctgttcaca
cgggacacggggcaaactctgctgacgcgccacggaacacgcatcctcacagccctgcgg
gtggaacacccgctggccaggatggtggtggagtgtgtgaggagacacagctcggtgact
ggagatggctccaagaccttcgtcctgctgctcgcctcattgctacgggagatacagaaa
cacacccgaaaagcccgccaggaaggcgcaggcgccaagcgtttggctgaagctctgttg
gccttcggattggacgagctcagtgatgtcatcactgttgcagtggctccacatggctcc
tccctttcagacccacacaccccaggacaaacagacacacacactctgtgccgcctactc
agtgctttccttcacacccggatcagccctactcatgctgaaatcatcagccaactgacc
tgtgagctgctctcgcattggagctgccatggcgacttcattaacgaacacttccctgct
ctgcacacagcagtatcaggcttccctattggctgttcccgtctcctggagggccaggtc
atacatgcagatttctctacacccctcccactccgtgaccatagaccaatcagggcccta
gcggtgacagaacccctagaacccagcctgctgattgatggaactgtgctagagctgggt
ggggctaatagagagatagaaagtgtgtgtgtgagattagggaggaggttagacagtgtg
tgtgtcattctacagcatctaggagtgtctctgctcctctcatcagtcagacagtcagag
gccttcctggctgcagtggggaggtatggggtgtgtgtgttagagtgtgtgtgtgaagac
gacctcaccttgttctctgtgctcagtggagcccaacctgtctcagactgggctgtgatt
ggacaggaacacgttgctacggttaccttctgccggccgctggtgctgggagctcacagg
tatggtaacaggatagttacacacacacatacacacacacactattctaattatgtggtt
ttctctcccaggttcgtcaatgtggggtttcctaaggcagaggacaggggcagaccccac
agtctggttgtgtgtggactgaccgagggccagacggaacagagtgtgtgtgctgtacga
gatgctctacacatgctgcatactacctggggccccaaacacaggactagagctacagag
agaacagcacgcacagacgtgatggagccttgtgtcatttccgtgggcgggacttttgag
ttcctgttacaccacacactcctacagcgcaaacacggacaaacacactctgtcacacac
agtcacacacacactctgtcacacacagacatgcacactctgtcacacacagacacgcac
actctgtcacacacagacatgcacactctgtcacacatagacacgcacactccgtcacac
acagacacgcacactcagtcaaacgcagacacacacactctgtcacatttggacaaccct
gccgtctcggggatgctagcagaggccctactgagtgtgcccagacagatctactcccac
aatcctcggcactacctggaggctcacgcacacactctcagttgcatgcgtaaccatggt
aactctacggacctgccggaaattagtgctgttctggcagcggatggttctaatatggtc
caggctgacactgggtctgggtcaggatctgggtcaggggtaaaggaggtgacagtttgg
tcaagctctggctctagttcaggtgtggagtcagtgtcctgtaagtatcaactgatcctg
gctgttctacagtgtctcaggagtctactgtctgtggacactgtactacacgctaatacc
tcacacacactctcacacgcctgtcagagagaagaggaggagggtgactga
DBGET
integrated database retrieval system
