Oncorhynchus tshawytscha (Chinook salmon): 112217177
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Entry
112217177 CDS
T05605
Name
(RefSeq) filamin-C-like isoform X1
KO
K27393
filamin-C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112217177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112217177
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112217177
Intermediate filaments
Intermediate filament-binding proteins
112217177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
YtkA
CFSR
CH_2
Motif
Other DBs
NCBI-GeneID:
112217177
NCBI-ProteinID:
XP_042156174
UniProt:
A0A8C8DE05
LinkDB
All DBs
Position
LG17:complement(15350105..15425166)
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AA seq
2785 aa
AA seq
DB search
MMSNNTYYEQQQPPQYYQSTDNGDDEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLK
CLNKRINDLQKDLTDGLKLIGLLEVLSQKKMYRKYHARPNFRQMKLENVSVALEFLEREH
IKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDAKKLTPKQRLLGWIQN
KVPQLPINNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGV
PQVIAPEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLRSKTLHPKKAKAYGPGIDPRGNM
VLKPAEFIVETVEAGLGEVLVYVEDSEGHTEEARVIPNNDKNRTYSVIYLPKVEGLHKVK
VMFAGQDIDRSPFVVSVSKAMGDPNKVQARGPGLEPVGNVANKPTYFDIYTAGAGAGDVG
VIIVDSQGRRDTVEIILENKGDSIFRCTYCPILKGPHVIYVTFAGQQIPRSPFTVHISEA
PPSALPPGSPVQIVPQSIRTPPTDKAKRVPPPTPPKPRRPTSNPNMCRASGRGLQPKGVR
VKEVADFKVYTKGAGSGELKVTVKGPKGLEEPVKVRDAGDGVYECDYYPIMTGKYTITIT
WGGQTIPRSPFEVGVSEDVGSQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLGFSIEG
PSQAKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILLTANDVFPEKV
KSYGPGLEPIGCIVNKPAEFTIDASGAGRGQLKIYAQDAEGFPIDIQITENGDSTFLCVY
IPTKPIKHTIIITWGEVNVPNSPFRVTIGEGSHPENVKVYGPGVEKSGLKANEPTYFTVD
CSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYMPPGPGRYTIMVLFADH
EIPISPFRIKVDPSHDANKVRAEGPGLNKTGVEVGKPTHFTIYTKGAGKAKPEVHFTGAA
KGDAVRDFEIIDNHDYSYTVRYTAVQQGNMSISICHGGDPIPKSPFNITVAPPLDLNKVK
VQGLNNKVDVGKDQEFTVSTHGAGGQGKLDVKITSPSRRPIPCKLESDTANEVHTVKYIP
PEEGPYKVDISYDGNPVPGSPFTVEGVMPPDPSKVRAYGPGLQGGMVGKAAPFAIDTKGA
GTGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYAINILFAEQHIPGSPFKAMVQ
SVFDPSKVTASGPGLERGKVNEAGSFVVDCSKAGEAELTIEIISDSGSKVEVRVQNNSDG
TYSITYIPQFHGMYTITIKYGGHAVPKFPARVQVDPAVDTSGVKVCGPGVEPRGVLREVT
THFIVDARAKSKIGGSHVKARIVNPSGANTDAYITDKGEGTYRVEYAAYEDGMHLIEVLY
DDVAVPNSPFRVPVTEGCDPSRVRAYGPGLEEGLVNKPNRFTVETRGAGTGGLGLAIEGP
SEAKMSCKDNKDGSCSVEYIPFTPGDYDVNITFGGLPIPGSPFRVPVRELVDPSKVRCSG
PGLGSGVRARVLQTFTVDTSKAGLAPLGVVLYGPTGVAEPVNITDNGDGTHTATYTPAKD
GPYIVCVKYADQEVPRSPYKIKTLPAHDASKVRASGPGLNAQGVPASLPVEFTIDARDAG
EGLLTVQILDPEGKPKKANIRDNRDGTYTVSYVPDMAGRYTITIKYGGDEIPYSPYRIHA
LPTGDASKCLVTVSIGGHGLGSGLGPTIQIGEETVITVDAKAAGKGKVTCKVSTPDGAEL
DVDVVENSDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVVASDTVPIIEEPCDKLQL
QQPYQAYQGYPPHWATEEPVTTGDVMEPMLRPFNLVIPFTVQKGEITGEVRMPSGKTARP
NITDNKDGTVTVKYAPTEKGLHEMDIKYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSHG
MVNKSATFTIVTKDAGEGGLSLAVEGPSKAEINCKDNKDGTCTVSYVPTVPGDYNIIVKF
DNKHIAGSPYTAKITGDDTMRTSQLNVGTATDVSLKISETDLTSLTASIRAPSGNEEPCL
LKRLPNRHIGISFTPKEVGEHVVSVKKNGTHVTNSPFKIMVGQSEIGDASKVKVFGQGLV
EGHIFEVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDVEDGTCKVTYCPTEPGNYIINI
KFADQHIPGSPFTVKVCGEGRVKESITRKRHAPSIATVGSTCNLNLKIPGNWFQMVSAQE
RHTRTFTRSSHTYTRTECTEISKTRAGETKREVRVEESTQVGGDPFRDVFGEFLGSQSLT
GFSGIPATTRQSQEGVCVTQEGDQGAQEMTAQVTSPGGKTEDAEIIDGEDSTYSVRFIPQ
EMGPHTVNVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLDRGVAGVAAEFSIWTRE
AGAGGLSIAVEGPSKAEITFEDRKDGSCGVAYVVQEPGDYEVSIKFNDEHIPDSPFIVPI
ATLSDNARRLTVTSLQEMGLKVGQEASFAVQLNGARGLIDAKVHTPSGAVEECYVTELDS
DQHAIRFIPRENGVHSIEVRFNGSHIPGSPFKIRVGEIGQVGDPGMVSAFGPGLEGGTTG
AASDFVVNTCNAGSGALSVTIDGPSKVKMDCQDCPEGYKVTYTPMAPGSYLITIKYGGPS
HIVGSPFKAKVTGARLSGGHSLHETSSVLVETVTKSLSSSSSMGVAYGPKFSSDASKVVS
RGAGLSKAFVGQKNTFTVDCSNAGTNMLMVGVHGPKTPCEEVYVKHLGNRMYNVTYTVKE
QGNYILIVKWGDENVPGSPFHVTVP
NT seq
8358 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaataatacttactacgagcagcagcagccgccgcagtactaccagagtacg
gacaacggggacgacgaagaagaggagatgccggctacggagaaggacctcgctgaggat
gcgccctggaagaaaatccaacagaacaccttcaccaggtggtgtaacgagcacctcaag
tgcctcaacaagcggatcaacgacctacagaaagacctgaccgacgggctcaagctcatc
ggtctcctggaggttttgagccagaagaaaatgtacagaaagtaccacgccagacctaac
ttcagacagatgaaactggaaaatgtgtccgtcgcgctggaatttttggagagagaacac
ataaagctggtatcgatagacagtaaggccatcgtggatgggaacctgaagcttattctg
ggtctgatctggactctgatcctgcactattccatctcaatgcccatgtgggaggacgag
gacgatgaggacgccaagaagctgacccccaagcagaggctgctgggatggatccagaac
aaggtgccccagctgcccatcaacaactttcaccgtgactggagggacggcaaggctctg
ggagccctggttgacaactgtgccccaggcctgtgtcctgactgggagacgtgggatcct
agccagcctgtggagaatgccagggaggcaatgcagcaggctgatgactggctcggtgtg
ccccaggtgatagcccctgaggaaatagtggatcccaatgtggacgagcactcggtgatg
acctacctgtcccagtttcccaaatccaagctgaagcctggcgccccgctgcgctccaag
actctacaccctaagaaggccaaggcctacggaccaggtattgatcccagaggtaacatg
gtgctgaagccggctgagttcatcgtggagacagtggaggcggggctaggggaggtgctg
gtctatgtggaggactcagagggacacacagaggaggccagagtgatccccaacaatgac
aagaacaggacgtactctgtcatctacctgcccaaagtggagggccttcacaaggtgaag
gtgatgttcgctgggcaggacatagacaggagtcccttcgtagtgagtgtgtccaaggcc
atgggagaccccaacaaggtgcaggccagaggaccaggactggagcctgtaggcaacgtg
gctaacaagccgacctacttcgacatctacacagcaggtgccggtgctggagacgtgggt
gtgatcattgtggactcccagggcagaagagacaccgtggagatcattctggaaaacaag
ggggacagtattttccgttgcacctattgccctatcctgaaggggcctcatgttatctac
gtgacgtttgctgggcagcagatacccagaagccctttcactgtccacatctcagaggct
ccaccgagcgccctgccccctggctctccggtgcagatagtgccccagtccatacgcacc
ccacccacagacaaggccaagagagtgccccccccaacaccgcccaaacccaggcgacca
accagcaaccccaacatgtgtcgggcctcagggagaggtctccagcctaagggggtgagg
gtgaaagaggtggctgacttcaaggtctacaccaagggagccggcagcggagagctcaag
gtcaccgtcaaggggccaaagggactagaggagcctgtgaaggtgcgtgacgcgggagat
ggggtgtatgagtgtgactactaccccatcatgactggcaaatacaccatcaccatcacc
tggggcggacagaccatcccacgcagcccgtttgaggtgggggtgagtgaggacgtgggg
tcccagaaggtgagggcgtgggggccgggcctggagacaggcatggtggggaagtcagct
gactttgtggtggaggccatcggcacagaggtgggaactctgggtttctccatcgagggc
ccgtcgcaggctaagatagagtgtgatgataagggcgatgggtcatgtgacgtacgttac
tggcccacggagcctggcgactacgctgttcacgtcatctgtgacgacgaggacatcaag
gacagcccctttatggcccacatcctcctcacagccaatgacgtgttccctgagaaggtg
aagagctatggcccaggtctggaaccgattggctgcattgtcaacaaaccagcagagttc
accattgatgcaagtggagccggcaggggccagctgaagatatacgcccaggatgcagag
ggcttccccatagacatccagatcacagagaacggagacagcaccttcctctgtgtctac
attcccactaagcccatcaaacacaccatcattatcacctggggagaggtcaacgtcccc
aacagtcccttcagggtgaccatcggagagggcagccacccagagaatgtgaaggtgtat
ggtccaggtgtggagaagtcaggtctgaaggccaacgagcccacctacttcactgtggac
tgcagcgaggcaggacaaggggatgtcagtatcggcataaagtgtgctcccggcgtggtg
ggtccggcagaggctgacatcgactttgacatcatcaagaacgacaacgacacgttcaca
gtgaagtacatgccccccggccccggacgctacaccatcatggtgctgttcgctgaccac
gaaatacccatcagccctttcaggatcaaggtggacccctcccatgacgctaacaaggtg
agggcggagggacccggactcaacaagacaggagtggaagtaggtaagcccacccacttc
accatctacaccaagggagcgggcaaggccaagcctgaagtgcacttcaccggagcagcc
aaaggggacgccgttcgagactttgagatcattgacaaccatgactattcctacaccgtg
cgctacactgcagtgcaacagggtaacatgtctatctcaatctgccacggcggtgacccc
attcccaagagccccttcaacatcactgtggctccgccccttgacctcaacaaggtcaaa
gttcaggggttgaacaacaaggttgacgttgggaaggatcaggagttcacagtgagcacg
catggcgccggtggccagggcaagttggatgtgaagatcacctcgccctctcgtcggcca
atcccctgcaagctggagtctgacacggccaacgaagtgcacactgtgaagtacattccc
cctgaggagggaccctacaaagtggacatcagctatgatgggaaccctgtgcctgggagc
cccttcactgtggagggggtgatgccccctgacccctcaaaggtgcgtgcctatggccca
ggcctccaggggggcatggtgggcaaggcggcccccttcgccattgacaccaagggtgcg
ggcaccggcgggctgggcctgaccgtggaggggccatgcgaggccaagattgagtgccag
gacaacggcgacgggtcctgctctgtctcctacctgcccacagagcccggcgaatacgcc
atcaacatcctgtttgccgagcagcacatccccggctcccccttcaaggccatggtacag
tctgtgtttgaccccagtaaggtcacagcaagtgggccaggcctggagagagggaaggtc
aacgaggcagggtcgttcgtagtggactgctccaaggctggggaggccgagctgaccatt
gagattatttccgattcggggtcgaaggtggaggtgcgtgttcagaacaacagtgatggg
acctattctatcacgtacatcccacagttccatggcatgtatactatcaccattaaatac
ggggggcacgccgtgcccaagttccccgcccgtgtgcaggtggacccagccgtggatacc
agcggggtgaaggtgtgcggaccaggagtggaacccagaggggtcctgagggaggtgacc
acccatttcatcgtggatgcccgtgccaagagcaagatcgggggcagccatgtcaaggcc
cgcatcgtcaacccttcaggcgccaacacagacgcctacatcactgacaagggagaaggc
acctacagagtggaatacgctgcctatgaggatgggatgcacctgatagaggtgctgtat
gatgatgtggcggtgcctaacagtccgttccgtgtcccggtaacggagggttgtgacccc
agccgtgtcagagcctacggccctggtctggaggagggcctggtcaacaaacccaaccgc
ttcactgtggaaaccaggggtgctggtacagggggtctgggcctggccatcgagggtccg
tcagaggctaagatgtcctgtaaggacaataaagatggcagctgcagtgtggagtacatc
cccttcaccccgggagactatgatgtcaacattaccttcggaggcttgcccatcccaggg
agtcccttccgtgtgccagtgagagagctggtggacccaagtaaggtgaggtgttcaggc
ccagggctgggtagtggagtcagagcccgtgttcttcagaccttcaccgtggacaccagc
aaggctggcctcgcccctctgggagtggtgctgtacggacctactggagtggctgagcca
gtgaacatcacggataacggagacggaacacacacagcgacctacaccccggccaaggac
ggcccgtacatcgtgtgtgtgaagtacgctgaccaggaggtccctcgcagtccgtataag
atcaagacattgcctgctcatgatgccagtaaggtgcgtgccagtgggccaggtttgaat
gcccagggtgtgcctgccagcctgcctgtggagttcaccatcgatgcccgtgatgctggc
gaaggcctgctcactgtgcagatactggacccagaaggcaagccgaaaaaggccaacatc
cgtgacaacagagatgggacgtacacagtgtcctatgtacctgacatggcagggcgctac
accatcaccatcaagtatggaggagatgagattccctactcaccctatcgtatccatgcc
ctgcccactggagacgccagcaagtgtctggtcacagtttccattggaggacatggattg
ggttcaggcctcggacccaccatccagatcggcgaggagaccgtcatcaccgtggacgca
aaagctgctgggaaggggaaggtgacctgtaaggtgtcgacgccagatggggccgagcta
gacgtggacgtggtggagaattccgacggaacgtttgacatctattacacggctccggaa
cccgggaaatacgtcatcaccatccgctttggaggagaacacattccaaacagccccttc
cacgtggtggccagtgataccgtccctataatagaggaaccgtgtgacaagctccagtta
caacagccctaccaggcctaccagggctacccccctcactgggccacagaggagccagtc
accaccggcgatgtcatggagcctatgctccgccccttcaacctggtcattccgttcacc
gttcagaagggagagatcacaggtgaggtgcgtatgccctcaggtaagacagcccgtcct
aacatcacagacaacaaggatgggacagtcacagtgaagtacgcccctacagagaaaggc
ctgcacgagatggacatcaaatatgatggaaaccacatcccaggaagtcccctccagttc
tatgtagatgccatcaatagtggtcatgtgacagcctatggtcctggtctgagtcacggc
atggtcaacaaatctgccaccttcaccatcgtcaccaaggatgcaggggaaggtggtctg
tccctggcggtggagggtccctctaaggcagagatcaactgtaaggacaacaaggatgga
acctgcactgtgtcttacgttcccactgtgccaggagactacaacatcatcgttaagttt
gacaacaaacacatcgccggcagcccctacactgccaagatcacaggagacgacactatg
aggacatcccagctcaacgttggcacggcaacagacgtgtcattgaagatctcagagaca
gacttgaccagcctgacagcgagcatcagagcaccgtcgggcaacgaggaaccctgcctg
ctcaagagactgcccaatcgacacattggtatctcattcactcctaaggaggtaggggag
catgttgtgagtgtgaagaagaacgggacgcacgtgaccaacagccccttcaagatcatg
gtgggccagtcagagattggcgacgccagcaaggtcaaggtgtttggccagggactggtg
gagggacacatctttgaggtggctgagttcatagttgacaccaggaacgcaggttatggt
ggtctgggtctgtctatcgagggtcccagtaaggtggatattaactgtgaggatgtggag
gatggtacctgtaaggtgacctactgtcccactgaaccaggaaattacatcatcaacatc
aagttcgccgaccagcacattccaggaagtcctttcacagtgaaggtgtgtggtgagggc
agggtgaaggagagcatcaccaggaagagacatgctccatccattgctactgtgggcagc
acctgtaacctcaacctcaaaataccaggtaattggttccagatggtgtcggcccaggag
cggcatacgcgcacgttcacgcgcagcagtcacacgtacacgcgaacggagtgcacagag
attagtaagacaagggcgggggagaccaagcgggaggtgcgcgtggaggagagtacccag
gttgggggagaccccttcagggacgtgtttggagagttcctggggagtcagagtctcaca
ggcttcagtgggataccagccactaccagacagtctcaagagggtgtgtgtgtgacacaa
gagggtgaccagggggcccaggagatgacggcccaggtgaccagtccggggggtaaaaca
gaggacgcagagatcatcgacggcgaggacagcacctacagcgtccgcttcatcccccag
gagatgggtccccacacggtcaatgtcaagtaccggggccagcacgtccccgggagcccc
ttccagttcactgtggggcccctgggagagggaggggcacacaaggtccgggctgggggc
acagggctggatagaggagtggcaggagtggcagctgagtttagtatctggaccagagag
gctggagcagggggtctgtccatcgctgtagaggggcccagtaaggcagagatcaccttt
gaagacaggaaggatggatcctgtggagtggcctatgtggtgcaggagccaggtgactat
gaggtgtccattaagtttaatgatgagcacatcccagacagtccctttatagtccccatc
gccactctgtctgataacgcacgccgccttacagtcaccagcctacaggagatgggattg
aaggtgggccaggaggcgtcgttcgcggtgcagttgaacggggcgagggggttgatagat
gctaaggttcacaccccgtccggagctgtagaggagtgttatgttactgagctggacagc
gaccagcacgccatccggtttatcccgagggagaacggagtccactccatcgaagtgcgt
ttcaacgggagccacattcccggtagtcccttcaagatccgtgtgggagagatcggacag
gtcggagacccgggaatggtgtcagccttcggacctgggctggaaggaggaaccacaggc
gcggcgtctgattttgtagtgaacacgtgtaatgcagggtcgggtgctctgtcagtgacc
attgatgggccgtccaaggtcaagatggactgtcaggattgtcccgagggttacaaggtc
acttacacacccatggcccccggcagctatctcatcaccatcaaatacggaggaccatcc
cacatcgtaggcagccccttcaaggctaaagtcacaggtgctcgtctctctggtggccac
agtctacatgaaacttcgtccgtacttgtggagacagtaaccaagtcgttgtcgtcgtca
tcgtcgatgggcgtggcctatggccctaagttctcttcggatgccagtaaggtggtctcc
cggggcgccggcctatcaaaggcctttgtagggcagaagaacaccttcacagtggattgc
agcaatgcaggaactaacatgttgatggtgggggtacatggacccaagaccccgtgtgaa
gaggtctatgttaaacatctgggaaacaggatgtacaacgtcacctacaccgtcaaagaa
cagggcaactacatcctcatcgtcaaatggggggatgaaaatgtccctggcagccccttc
catgtcaccgtcccctaa
DBGET
integrated database retrieval system
