Oncorhynchus tshawytscha (Chinook salmon): 112217944
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Entry
112217944 CDS
T05605
Name
(RefSeq) thyrotropin receptor-like
KO
K04249
thyrotropin receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112217944
04081 Hormone signaling
112217944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112217944
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Peptide
Thyrotropin
112217944
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
Comm
Motif
Other DBs
NCBI-GeneID:
112217944
NCBI-ProteinID:
XP_042156925
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Position
LG18:complement(35719847..35785834)
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AA seq
793 aa
AA seq
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MTENDRHSLQVITCALFTLVTLPIETLVDFDSCPTVCDCSERKTYTISCFDIDVIPTFPA
STDTLWLLETRLKSVPGDVFSNLVNISRIYISVDLTLKRLERHSFYNLKKITHIEIRNAR
SLSYIDPEAFKNLPNLKYLGIFNTGLTIFPDLTNIHSDDMNFILEITDHPYISEVPANSF
RGITNQVLTVMLYSNGFTDIQHHAFNGTKLDAVYLHRNRRLTRMDENMFSGTVSGPMLLD
VSLTAVSSLPTAGLESLRELMARSAWNLKKLPPIKTFKHLTSADLTYPSHCCGFKNLKKK
RGYLEYIICNLTAFYDQQQKSSVGPLTVPSLQGDPTADTAGQEPSEEGFRDGVFKETQGD
PWRDFHSSLNYHAYFGGQPDDDVGFGEMLKNPQEDTSQNFDNRYDYVVCEEGEEVTCAPA
PDEFNPCEDIMGFSFLRVSVWFVSLLAVVGNMVVLLVLLTSHYKLSVSRFLMCHLAFADL
CMGIYLLLIASVDLHTKMEYYNHAIDWQTGPGCGLAGFLTVFASELSVYTLTVITLERWY
AITFAMRLDRKLRLPHATAVMLAGWFFCLLLAVLPLVGVSSYQKVSICLPMDNQSTMAQV
YIVSVLILNILAFLVICTCYMKIYCAVHNPYYCSGSKDTNIAKRMAILIFTDFLCMAPIS
FYAMSAVVDRPLITVSNSKILLVLFYPLNSCANPFLYAIFTKAFRGDIFILLSKVGLCQR
RAQLFRGQAVSSKGSSRVCQQVQGCKKRDTDRKRTGGPEEVPIHLQEYSGSGHTYIQLAS
QQPSPEESCSLET
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaacgacagacacagcttgcaggtgataacatgtgcgctgtttaccctcgtc
acgttaccgatcgaaaccttggttgacttcgactcctgccccactgtttgtgattgctca
gaacggaagacctacacgatctcctgctttgacattgatgtcattcccacatttcctgca
agcacagatacactgtggcttctggagacgcgtctgaaatcagtgccaggagatgtcttc
tccaacctagtaaacatatcaaggatatatatatcagtggatctgacgctgaagaggctg
gagaggcattcattctataacctgaagaaaatcacccacatagagatccggaatgcgagg
agtctgtcatacatagatccagaagcatttaaaaaccttccaaacctgaaatacctgggt
attttcaatactggcctcaccatcttccctgatctcaccaacattcactcagatgacatg
aacttcatacttgagatcactgatcatccttacatctctgaggtcccagccaactcattc
cgcggtattaccaaccaagtgctgacagtgatgctgtacagtaatggcttcacagacatc
caacatcatgctttcaacgggaccaaactggatgctgtgtacctccatagaaacaggcgt
ctgaccaggatggatgaaaatatgttttctggcactgtcagtggcccaatgctgcttgac
gtgtccctgacggcggtgtcgtccctccccacggcagggctggagtctctcagggagctg
atggcccgcagcgcctggaacctcaagaagcttccgccaatcaaaaccttcaaacacctg
accagcgctgacctcacctacccctctcactgctgcggcttcaagaacctcaagaagaaa
cgaggatacctggagtacatcatctgtaacctgacagccttctacgaccagcagcagaag
agttccgtaggtcctctcacagtcccatccctccagggagaccccactgcagacacagct
ggccaggagcccagtgaggagggcttcagagatggtgtattcaaagaaacccagggagac
ccctggagagacttccacagcagcctcaactaccacgcctacttcggtgggcagccggac
gatgacgtgggcttcggggagatgctgaagaacccgcaggaggacaccagccagaacttt
gacaatcgctacgactacgtggtctgtgaggagggcgaggaggtgacctgcgcccctgca
cccgacgagttcaacccgtgtgaggacatcatgggcttcagcttcctgcgtgtgtctgtg
tggtttgtgtctctgctggctgtagtaggtaacatggtggtgctattggtcctcctcacc
tcccactacaagctctccgtctcacgcttcctcatgtgtcacctggccttcgctgacctc
tgcatggggatatatctcctcctcatcgcctcagtggaccttcacaccaagatggagtac
tacaaccacgccatcgactggcagacggggccgggttgcgggttggcggggttcctcacg
gtgttcgccagcgagctgtcagtttatacgctgacagtgattacgctagagaggtggtac
gcaataacgttcgccatgaggctggacaggaagttacgtctgccccacgccactgctgtg
atgctggctggatggtttttctgcctcctcctagcggtgctccccctagtgggggttagc
agctaccagaaggtcagtatctgcctgcccatggataaccagtccaccatggcccaggtc
tacatcgtctcagtcttgatcctaaacatcctggcattcctggtgatctgtacctgttac
atgaagatctactgcgctgtgcacaacccttactactgctcagggtctaaagacaccaac
attgccaaacgcatggccatcctcatcttcactgacttcctgtgtatggcgcccatctcg
ttttacgccatgtcagccgttgtggaccggccgcttatcaccgtgtccaactctaagatc
ctactggtgctcttctaccctctcaactcctgtgccaaccccttcctgtacgcaatcttc
accaaggctttcaggggggatatatttatcctgctcagtaaggtggggctgtgccagcgt
cgggcgcagctcttcagagggcaagcagtcagttcgaagggtagcagtagggtgtgccag
caggtccaggggtgtaaaaagagagacactgacaggaagaggacaggaggaccagaggag
gtacccattcacctgcaggagtattctgggtctggtcacacctacattcagctggcctca
caacagcccagtcctgaggaaagctgtagcctggaaacgtga
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