Oncorhynchus tshawytscha (Chinook salmon): 112217949
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Entry
112217949 CDS
T05605
Symbol
actc1a
Name
(RefSeq) actin, alpha cardiac muscle
KO
K12314
actin, alpha cardiac muscle
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
otw04814
Motor proteins
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112217949 (actc1a)
04820 Cytoskeleton in muscle cells
112217949 (actc1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112217949 (actc1a)
04261 Adrenergic signaling in cardiomyocytes
112217949 (actc1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112217949 (actc1a)
04147 Exosome [BR:
otw04147
]
112217949 (actc1a)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
112217949 (actc1a)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112217949 (actc1a)
Exosomal proteins of bladder cancer cells
112217949 (actc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
112217949
NCBI-ProteinID:
XP_024234338
UniProt:
A0A8C8HBD1
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All DBs
Position
LG18:37275865..37285396
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AA seq
377 aa
AA seq
DB search
MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgacgatgagactaccgccctcgtgtgcgacaacggctctggcctggtcaag
gctgggttcgccggtgatgacgctccccgcgctgtgttcccatccatcgttggacgcccc
cgtcaccagggtgtgatggtgggaatgggacagaaggacagctatgtgggagacgaggct
cagagcaagagaggtatcctgactctgaagtaccccatcgagcacggcatcatcaccaac
tgggacgacatggagaagatctggcaccacaccttctacaacgagctgcgtgtggcccct
gaggagcaccccaccctgctcactgaggcccccctcaaccccaaggccaacagggagaag
atgacccagatcatgtttgagaccttcaacgtccccgccatgtacgtggccatccaggcc
gtgctgtccctgtatgcctccggtcgtaccaccggtattgtgctggactctggtgatggt
gtgacccacaacgtgcccatctatgagggttatgctctgccccacgccatcatgcgtctg
gatctggcgggtcgcgacctcactgactacctgatgaagatcctgacagagcgtggctac
tccttcgtgaccaccgccgagcgtgagattgtgcgtgacatcaaggagaagctgtgctac
gtggccctggactttgagaatgagatggccaccgctgcctcctcctcctctctggagaaa
agctatgagctgcctgacggtcaggtcatcaccattggtaacgagcgtttccgttgccca
gagaccctcttccagccttcctttattggtatggagtccgctggtatccatgagaccgcc
tacaacagcatcatgaagtgtgacattgacatccgtaaggacctgtacgccaacaacgtc
ctgtccggaggtaccaccatgtaccctggtattgctgaccgtatgcagaaggagatcacc
gctctggcccccagcactatgaagatcaagatcatcgctccccccgagcgtaagtactcg
gtctggatcggcggctccatcctggcctctctctccaccttccagcagatgtggatcagc
aaacaggagtacgacgaggcaggtccttccatcgtccacaggaagtgcttctaa
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