Oncorhynchus tshawytscha (Chinook salmon): 112219222
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Entry
112219222 CDS
T05605
Symbol
ntrk3a
Name
(RefSeq) NT-3 growth factor receptor isoform X1
KO
K05101
neurotrophic tyrosine kinase, receptor type 3 [EC:
2.7.10.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112219222 (ntrk3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112219222 (ntrk3a)
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112219222 (ntrk3a)
Protein kinases [BR:
otw01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
112219222 (ntrk3a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
LRRCT_2
Ig_3
ig
LRR_8
Ig_2
C2-set_2
LRR_5
LRRNT
Haspin_kinase
TrkA_TMD
LRR_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
112219222
NCBI-ProteinID:
XP_042157388
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All DBs
Position
LG19:complement(20829826..21094829)
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AA seq
829 aa
AA seq
DB search
MDLFFIPPRICWWRVLFLLSIFQDYLSNMLDCPPTCSCSPTEIYCNKSDNGKFFPLLALQ
DTGNNGNNSIEDLFKNITSIHIENWTGLQTLKDVDMELYTGLQRLTIMNGNLRGIQARAF
SQNPHLRYINLSKNPLTTLSWQLFQNLQLLELRLEEVVFECGCDIRWIQLWQQRGEAGLN
TQLLFCNNGASKIPLQAMNISLCDLPDISVTHYNLTVIEGDRVTVTCNGSGSPLPEVDWT
VNDLHSINTHQSNVYWPNVHSINLTLVNVSRDDNFYMLTCIAENKVGMANASIQLTVHFP
PTILKLDEPERRHETCIEFTVRGNPQPTLRWFHRDKEIPPSDYIRTEMDTYQDYLEGCLN
FKDPTHHNNGNYTLEASNFLGVTTKTVYGHFLNAPFSDDYGDYGTPTPTITVTHRPEEDT
FGVSIAVGLAGFACVLLVVLFVLINKYGRRSKFGMKGPVAVISGEEDSASPLHHVNHGII
TPCTLDAGPDAVVIGMTRIPVIENPQYFRHGHNCNKPATYVQHIKRRDIILKRELGEGAF
GKVFLAECYNLSPTKDKMLVAVKTLKDPTLVFSQTLKDPTLAARKDFQREAELLTNLQHE
HIVKFYGVCVDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPLQTNGELGLSQMLH
IATQIAAGMMYLASQHFVHRDLATRNCLVGNGLLVKIGDFGMSRDIYSTDYYRGCVGGHT
MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLANNEVIECITQGRVLE
RPRVCPKEVYDIMLGCWQREPQQRLNIKDIQKILYALGKATPVYLDILG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggatttattttttattccaccacgaatttgctggtggagggtattgtttcttttgagc
atctttcaggactacttgagcaatatgctggactgcccgccaacctgcagctgttctcca
actgagatctattgcaataagtctgacaatgggaaattctttcctttgcttgcactgcaa
gatactgggaacaatggaaataacagcatcgaagatctgttcaagaacatcacctcaata
cacattgagaactggactggcctgcagaccctgaaggatgtggacatggagctgtacact
ggacttcagagactaacgatcatgaacggcaacctgcgtggtatccaggccagagccttc
tcccagaacccccacctccgctacataaacttatcgaagaatcctctgaccacattatca
tggcaactcttccagaatcttcaactcctcgagctgaggctggaagaagtggtgtttgag
tgtggctgtgatatccgctggattcagctgtggcagcagcgaggggaggctggcctgaac
acccagctgttattctgcaacaacggagcctccaagatccctctccaagctatgaatatc
tccctctgtgacttgccggacattagtgtgacccactataatctcacagtgattgagggg
gacagagtcaccgtcacctgtaatggatctggatcccccctccctgaggtggactggacc
gtcaatgacctccactccatcaacactcaccagtccaacgtgtactggcccaatgtccac
tccatcaacctgaccctggtcaacgtgagccgtgatgacaacttctacatgctgacctgt
atagcagagaacaaagtggggatggccaacgcctccatccagctcactgtccatttcccc
cccaccatcctgaagctagacgagcccgagcgtcgccatgaaacctgcatagagttcacg
gtgcgtggtaacccccagcctaccctgcgctggttccaccgtgacaaggagatccccccc
agtgactacatccgcactgagatggatacctaccaggactacctagagggatgcctcaac
ttcaaggaccccacgcaccacaacaacggcaactacactctggaagctagcaacttccta
ggagtcaccaccaagacagtgtatggacacttcctcaacgccccgttttcagacgattat
ggtgattatgggactccaacaccgaccatcacagtaacacacaggcctgaggaggacaca
ttcggggtgtctattgctgtgggccttgctggatttgcctgtgtccttctcgttgtcctg
tttgttctcatcaacaaatatggccgacgttcgaagtttggaatgaaaggaccagtagca
gtgatcagtggtgaggaggactcggccagccccctgcaccatgtcaaccatggcatcatc
accccctgtacccttgacgctggaccagacgctgtggtcatcgggatgacccgtatccct
gtcattgagaacccacagtacttcagacacggacacaactgtaacaagcctgctacctat
gtacagcacataaagcgtcgggacatcattctgaagcgggagctgggagagggggccttt
gggaaggtgtttctggcagagtgctataacctcagccctaccaaggacaagatgctggtg
gctgtcaagacgctgaaggaccccacccttgtattttctcagacgctgaaggaccccacc
cttgcagcgagaaaagatttccagagggaagcggaactattgaccaacctgcagcacgag
cacattgtcaagttctacggcgtgtgtgttgatggagaccccctcatcatggtctttgag
tacatgaagcacggggacctcaacaagtttctcagagcccatgggcccgacgccatgatc
ctggttgacggacagccgctgcagaccaatggggagctgggcctgtctcagatgctgcac
attgccactcagatcgccgcggggatgatgtacctggcctcccagcactttgtgcaccgt
gatttagccactcggaactgcctggtgggcaacggcctgctggtgaagattggtgacttt
ggaatgtccagggacatctacagcacagactactacaggggctgtgtggggggccacacc
atgctgcccatccgttggatgccccctgagagcatcatgtacaggaagttcactacagag
agcgacgtgtggagctttggtgtgatcctctgggagatcttcacctacgggaagcagcca
tggtttcaactggccaacaatgaggtcatcgagtgtattacgcaaggacgggttttggag
aggccacgagtttgtcccaaggaagtgtatgacatcatgttgggttgctggcagagggag
ccccagcagaggctgaacatcaaggatatccagaaaatcctctatgccttgggcaaagcc
acgcctgtctacctggacatcctgggctag
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integrated database retrieval system
