Oncorhynchus tshawytscha (Chinook salmon): 112219882
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Entry
112219882 CDS
T05605
Name
(RefSeq) lysophosphatidic acid receptor 1 isoform X1
KO
K04289
lysophosphatidic acid receptor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04540
Gap junction
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112219882
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
112219882
09142 Cell motility
04810 Regulation of actin cytoskeleton
112219882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112219882
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Lipid
Lysophosphatidic acid
112219882
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7tm_4
Motif
Other DBs
NCBI-GeneID:
112219882
NCBI-ProteinID:
XP_042158738
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All DBs
Position
LG20:52154132..52211034
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AA seq
348 aa
AA seq
DB search
MEEEQCFYNESIAFFYNHSGKYLATEWNTVSKLVMGLGITVCIFIMLANLLVMVAIYVNR
RFHFPIYYLMANLAAADFFAGLAYFYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVCN
LLAIAIERHITVFRMQLHTRMSNRRVVVVIVVIWTLSIVMGAIPSVGWNCICDIGTCSSM
APLYCNSYLVFWAVFNLVTFLVMVVLYAHIFMYVRQRTMRMSRHSSGPRRNRDTMMSLLK
TVVIVLGAFIVCWTPGLVLILLDVFCANCNVLDFEKFFLLLAEFNSAMNPIIYSYRDKEM
SATFKQILCCQRQENVNGTAAEGSDRSASSINHTVLSGGKQNNDHSVV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaacagtgcttctacaatgagtccattgccttcttctacaaccacagtgga
aagtacctggctacagagtggaataccgtcagtaagctggtgatggggctgggtatcaca
gtatgtatcttcatcatgctggctaacttgctggtcatggtcgctatatacgtcaaccgc
cgcttccacttccctatttactacctgatggccaacctggccgccgcggacttctttgcc
ggcctggcgtacttctacctgatgttcaacacgggcccgaacacacggcgcctcacggtc
tccacgtggctgctccgacagggtctcatcgacacgtccctcacggcgtccgtgtgtaac
ctccttgccatcgccatcgagcgccacatcaccgttttccgcatgcagctacacacgcgc
atgtccaaccggcgtgtggtggtggtgattgtagtcatctggaccttgtctatcgtcatg
ggagccatcccgtcggtagggtggaactgtatctgtgacatcggcacgtgttctagcatg
gctccgctgtactgtaactcctacctggtgttctgggccgtattcaacctggtcaccttc
ctggtcatggtggtgctgtacgctcacatctttatgtacgtgagacagaggaccatgagg
atgagcagacacagctctgggccacgcaggaacagagacaccatgatgagtctgctgaag
actgtcgtcatcgtattgggtgcgttcatcgtgtgctggactccaggcctggttctcatc
ctactcgatgtgttctgtgccaactgtaacgtcctggactttgagaagttcttcctgctt
ctggctgagtttaactccgccatgaaccccatcatctacagctaccgggacaaggagatg
agcgccaccttcaagcagatcctgtgctgtcagcgccaggagaacgttaacgggacggca
gccgagggctccgaccgctcagcgtcctccatcaatcacaccgtgctgagtggagggaaa
caaaacaatgatcactcagtggtgtga
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