Oncorhynchus tshawytscha (Chinook salmon): 112220266
Help
Entry
112220266 CDS
T05605
Symbol
cdk5rap2
Name
(RefSeq) CDK5 regulatory subunit-associated protein 2 isoform X1
KO
K16542
CDK5 regulatory subunit-associated protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112220266 (cdk5rap2)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
112220266 (cdk5rap2)
Centrosome duplication proteins
Regulators of centriole replication
112220266 (cdk5rap2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pde4dip
CC_CDK5RAP2
Med28
Motif
Other DBs
NCBI-GeneID:
112220266
NCBI-ProteinID:
XP_042158534
LinkDB
All DBs
Position
LG20:complement(36753485..36821219)
Genome browser
AA seq
3109 aa
AA seq
DB search
MKDPCRVCRLRLIGSQCRWIFNPSGKRQLQVILSHVLGRLVDRDPDGQASEFLCGKCVFT
LERIVQCDVQIGRLQEEHAAQVQRLQQERENLKQCVAHVYGRHNPLPERPDVGEVSTIMT
PLWRSSEGGSPDECGGDQFTSEGQRKEDGGDGRVRRSVSMDLLGGPVGAAGRSSSAHRRV
QSGGDPCPEKNSGLRSRSMMYQDLVYRKGTLSSPSSRFRSASLQSLNPDHPHQTEPLGPL
SQRPCRESNISVRECSPSVGHTTTRNQRGHSPAQPPISDLLQLLRSIPRRPIQGTPGSRI
PVLRRKPMVGQPLPPGARRRRREAEWKSLQDLTEEFNDGYIPLRAEGFTEQLNEVSRLET
AQRQLNEEMNHFRAMNQNLSMTLEDIQNNNKVLSGKLEETEKELGSEKKNALKRDKTIQG
LSLVLKEKEKEIEELCHEIEDRDEALAKAREAAHKAQLQKYQGAEEHQSLLMEKQAELSQ
LQGEHHTKRLEAQKLQRSLGRREQELADLQQAKEQLEQELEELQQQRKKGDKALNEMQNQ
LKKLNGELGERESSLEQQYQEQLEQTKRRLQSHEVTIQRLTTCLADKEQQLQEYMNMMRD
MERSRSPEESDTILSKLRERLKEKEKALEQALDEKFSALEEKDNEIHQLCLSLREKERDL
ERLNNLLSHNEDTINSFDALIKEKDVELQHLANTMKNLQRAKQDVEDNLNRACREKDSII
SQLQLSLEGKTKDMEAMASALLSQSQSQARDLAEQMGQRLKVAEAMLVDAVKARERLVAD
NESAVEGLLATIGSKDQLLKESAEHYNRTLSERIQEIEELRRQLCTRQQQLASAEKLSST
ATQEGYLEMAKLRALLTEKESIIIKLLERGRERDQFLAELRQKEPAPSQVLELRQTIQLL
QERLEEREGDLAKRNNNEDSMEKVPLIKKTVVILKKELAQKTEALNKSLKRENELKMSLA
DLQSVLSELEGRIEGQAASIDSLTTTLETKDEIINDLHQRLGQRGESQTKEPQDQAAEAG
VAHSLPGLPQRERTIIGGDSQQEVLPLLADLQVEHRSLNRALRAEQQLYSSLVRTVKEQD
SAQRLHALQMELTAVTLLRQQLEEGIRSNEELREDLEREIARTKLSKEGHEGQGHVDPRE
LQSVRHQLEDTQRWNASLQARLGVIKNRGGGVGAINDTADTLGSFMADQTSYMSICVGEG
EGLDHLSVEELRQKVMELQDYVSRLLAVNEDLQRTLSLTEGSDHNLSQSSSGKEQHLERR
QEKKSPHSDRVHSDSGQDRVSQMDSGLGQVVDGRLNDGHQSADVTVSSTLAQIQRGIWPP
WSSKATSESQSQSSQQGEVERDRNWEQLCSLLSDCGALSVNHLREELQRLRSENVDLRGQ
LKEEKSKESKESADTLGDIGGAQGDLRKTLERLRSEAQGHRKIIQLLKEQLERTEAVVDV
ETLSDSQPDRMVTMTQEMERLCLEQEGEAHGREKLLEGEERRKAQGDGHATQGNSHTQPA
KGHSYRIARHGAGVKSRLPIPVRHNKTDTAGSRESVNQASDEFSEHLRGDVLHQLDLDHH
HDQQTSDSDSHSSPRAAQHCSPGSNHSSTTRGTTRQGLETEFLQAQAPTDAELLSQLELL
HQECQDKEQLIDRLEEQMAEWDELQAQLREKDRLNCHYMEALQAAESTITYLTACNLDRN
SQGGVLGSGSEYKLQRQCIELQKALEEKERLNTQLVECLNMVEVAIASLPGTSSSANALD
GHLDSQELCARLEAALRQVSASLDPLVLKTSVPGPSGYPLSLNAELQQQADSLQEALWEQ
SRLNVELQERLRSAEEAVAAQQGTANTAPAGLEGNYGRQPEEDLNKIPRGNETKEQRDWG
KHHGRSKFASDVKSSLGSEQVAKHLSECLRAAESAIGSLTAHCTNTSTSTSTTTRAAQTS
SDLQQQLDRLQRTLQEREALDDLGSTEPTHQQTSENPTRHTTPGAETPSPLELHHNICLL
QKAFYDLQEERGRREREAKTMEPGAWVPPQDVQAQLESLQKALKERKRACKSLEEKLATA
QSIIALQNSSKKTSHVATQRAPPLEQEDKGVQVDLQDLGYETSGKSEAEVDREESSSTDM
QLVPGSANSSLPCLLKQDQEEPSFSSTENLDTASSASYPSSPTLSSPKVSLKSLQTFDSY
GLCEDPAQLQAQVRELKTQLESQHQVILHLQTMLRRRASLSSELLTATSDSHTATGGHTG
SERGEEGGKEERSQEGEGEVTKEKMKSMSMELERERSVNRSMSEQLLQAQQRSRSASPAR
IDSLVQSQARELSQLRRQIQESRGLGALHRMQLEELSQAFEELLQASDVDYYVGEVFREQ
LDKSLGVLERLEGRLEKGDAQLDNEDGAALELAQRLSKELQEKTRLVQSLQIQLRGQTPS
SHHSSDSDLSDRVSNQATASYHNSPTLPACSKLHGNQAYHGMKESNGSSTSAAQQDGGVA
KDGGVSGPGVVSGHKWRARQLQGLQRENGRLVEQLRSSEELNATLRCELDLHRSILVQGI
STPLHTQGEGLGQSQGQAGGSPQKREDQRGEGHPASQQDTAQLCSMNPDLLAEHLLEIRA
LRQRLEETIYNNDRLREQLERRLGEVERDPATNIFIHGTEEQGQLTSELRFLWGQNQALK
EQLNLGSRDKQKENEKLREALARRTAKLEQSRKECEVLRQEHTRLQDRLDRSILEHTHLQ
DTLHYSRQEIHRLQCEVKMQRQQLSDSQHVLQSLRVELQVYEQIKTGTHKHTESSGTAQQ
SGSGSGSNQVDLGELLSEIRHLRLQLERSIQTNTSLRQKLEEQLLSGPNRPDTININYLL
ATSEVTGRSPGCEGCDPPRHSSSHDLKRQAQSEMDAVSQCSNSSGDSISGSAPPPSRLVP
GHRLWANRQGRHILGLIEDHNALRKQISEGRRLTRTMDTHLQECVCTLSQQGTDNRVVEQ
GHLKALSSSVNTMQQVLEEAGQLLKLVWRVSLPSGTVTATSNQQDELLKNEIASLKSRLS
QQERMLSGAVKRLRTTNQLKEGMERVIIDQLSLTHGVLKKARGNLETNYYTVFGLKGLSG
GPEEGGPGQWSVTIGASASSKGVSVLSPASRYTESPEERNSDSSSHCSY
NT seq
9330 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacccatgccgcgtatgcagattacgcctcattggcagccagtgccgctggatc
ttcaacccgtcaggcaaacggcagcttcaggtcatcctgtcccacgtgctggggcgcctg
gtcgaccgcgaccccgacggccaagcatcagagttcctgtgcggcaagtgcgtgttcacg
ctggagcgcatagtacagtgcgacgtacagatcggcaggcttcaggaggagcatgctgcc
caagtgcagcggttgcagcaggaaagagagaatctgaaacagtgtgtggcccacgtctat
ggacgccacaaccccctgccggagaggcccgacgtgggggaggtgagcaccattatgacc
ccgctctggaggtcctctgaaggtggaagtcccgatgagtgcgggggagatcagtttacg
tcagaagggcagaggaaggaagatggaggggatgggcgggtgaggcgctctgtgagtatg
gacctcctgggtggtccagtgggagccgcaggtcggtcaagctcagcccacaggagggtg
cagtctggtggggatccctgcccggagaagaactctgggctccgctcccggagcatgatg
taccaggacctggtctaccgcaaaggcaccctctcatcccccagttccaggttccgctca
gcctcgcttcagtccctgaaccctgaccaccctcatcagacagaacccctgggccccctg
tcacagagaccgtgcagagagtcaaatatatcagtgagggaatgctctccttcagtgggc
catactaccaccagaaaccagagagggcattccccagcccagcctcccatctccgacctg
ctgcagctgctgcgctccatccccagacgaccaatccaagggacccccgggagccgcatc
cccgttctgcggaggaagcccatggtgggacagccactcccccctggagcccgacgcaga
cggagagaggctgagtggaagtcgctccaggacctcacagaggagtttaatgatggttac
attcctctcagagctgagggtttcactgagcagctgaatgaggtgagcaggctggagaca
gcccagaggcagctgaatgaggagatgaaccacttcagagcaatgaaccagaacctctcc
atgaccctggaggacatccagaataacaacaaggtactgtctggtaagttggaggagact
gagaaagagctgggctcggagaagaagaacgctctgaaacgagacaaaaccattcaggga
ctcagtctggttctcaaagaaaaggaaaaagagattgaagagctgtgccatgagattgag
gacagggacgaggcattagccaaagccagggaggcagcgcacaaagcccagctccagaaa
taccagggtgcggaagagcaccagtctctgctgatggagaagcaggcggagctgtcccag
ctccagggcgagcaccacaccaagcggctggaggcgcagaagctgcagcgctccctgggc
aggagggagcaggagctggctgatctgcagcaggccaaggagcagctggagcaggagcta
gaggagctgcagcagcagaggaagaagggggacaaagctctcaatgagatgcagaaccag
ctaaagaagcttaacggggagctgggcgagagggaaagcagtctggagcagcagtaccag
gagcagctggagcagacaaagaggaggctgcagagtcacgaggtcaccatccagcgcctt
accacctgcctggccgacaaggagcagcagctacaggagtacatgaacatgatgagagac
atggagcggagcagaagtcctgaggaaagtgacactatactgtcaaagctgcgagaacga
ctgaaagaaaaagaaaaggctctggagcaagcgctggatgagaagttttcagcgctagaa
gagaaagacaacgagatccaccagctgtgtctgtcactcagggagaaggagagggacctg
gagagactcaacaacctactgtctcacaatgaggacaccatcaacagttttgacgcgttg
atcaaggagaaggacgtggagctgcagcaccttgccaacactatgaagaacttgcagcgt
gccaagcaggatgtggaggacaacttgaaccgagcctgcagggagaaggactccatcatc
agtcagctgcagctgtccctggagggcaagaccaaggacatggaggcgatggcaagtgcc
ctgctgagccagtcccagtctcaggcccgtgaccttgcagagcagatgggtcagaggtta
aaggtggcagaggccatgctggtggacgcggtcaaggcccgtgagaggctggtggcggac
aacgagagcgccgtggagggcctgctggccacaatcggcagcaaggaccagcttctcaag
gagtcagcggagcactataacaggacactgtctgagcgcatccaggagatcgaggagctg
aggcgacagctgtgtacccggcagcagcagctggcctccgctgagaaacttagttccact
gcaacacaggagggttacctggagatggctaagctcagggccctgctgaccgagaaggaa
tccatcatcattaaacttctggagcgcggccgggagagggaccagttcctggctgagttg
aggcagaaggaacctgcaccgtcccaggtgctggagctcagacagacaatccagttgctg
caggagagactggaggagagggaaggtgacctcgccaagaggaacaacaacgaagacagc
atggagaaggtccctctcatcaagaagacagtggtcatcctgaagaaggagttggctcag
aagactgaggctctcaacaagtctctgaagagggagaatgagctcaagatgtccctggct
gatctccagtcagtgttgtctgagctggaggggcgtatcgagggccaggcggccagcata
gactccctcaccaccaccctggagaccaaggacgagattataaacgacctccaccagcgt
ctgggccagagaggggagagtcagaccaaggagccccaggatcaggctgctgaagccggg
gtggcgcactcgctccctggcctccctcagcgggagaggaccatcatcggtggtgacagc
caacaagaggtcctgcccttgttggctgacctgcaggtggagcaccgctctttgaaccga
gccctgagggccgagcagcagctctactccagcttggttcgcaccgtcaaagaacaggac
agtgcccagcgtcttcacgccctccagatggagctgacagcggtgacactcctcagacag
cagctggaagaagggatccggagcaacgaggagctcagagaagacctggaaagagagatc
gccagaaccaagctctcaaaagaagggcacgagggccagggccacgttgaccccagggag
ctgcagagtgtcaggcatcagctggaggacacccagcgctggaacgcctccctgcaggcc
cgcctcggagtcatcaagaaccgcgggggaggggtgggtgccatcaatgacaccgctgac
accctgggtagtttcatggccgaccagacatcctacatgagtatctgtgtaggagagggg
gagggcctggaccatctgtctgtagaggagctccgacagaaggtgatggagctgcaggac
tatgtcagtagactgctggctgtgaatgaggacctgcagaggacgctctcattgactgag
ggctcagaccacaacctatcacaaagcagctccgggaaagagcagcatctagagcggaga
caggagaaaaagtcaccgcacagtgacagagtccacagtgactctggccaggacagagtg
agccagatggacagcggccttggacaggtggtagatggaaggctgaatgacggccaccaa
tctgctgatgtgactgtgagcagtaccctggcccagatccagagagggatatggcctccc
tggtcttccaaagccaccagtgagagccagtcacagagcagccagcagggagaggtggag
agggacagaaactgggagcagctttgttctcttctgtctgactgtggggccttatcagtc
aaccacctcagggaggagctacagaggttgcggtcagagaatgtggacctgaggggtcaa
ttaaaggaggagaaatccaaggagtccaaggagagcgccgataccttgggcgacatcggc
ggcgcacagggcgaccttcgcaagacattggagaggctgaggtcagaggcacaaggtcac
cgcaagattatccagttgctgaaggagcagctggagaggactgaagcggtggtggacgta
gagaccctgtcagatagtcagccggacaggatggtgacgatgacccaggagatggagagg
ctgtgtttggagcaggagggagaagctcatggtagagagaaactgcttgaaggagaagag
agaaggaaagcacagggagatggtcatgccacacaggggaacagccacacacagcctgcc
aagggacattcatatcgcatcgcaagacatggggctggtgtcaaatctcgcctgcccatc
cccgtgagacacaacaaaacagacactgctggcagcagggagtcggtaaaccaggcgtca
gacgagttctctgaacatctgagaggagacgtactacatcaactagacctggaccaccac
catgaccagcaaacgtcagactctgactcccacagctctcctagagccgcccaacactgc
agcccaggctctaaccatagcagcaccactagggggactaccagacagggcctggagacg
gagttcctccaagctcaggcccccaccgacgccgaactcctatcccagttggagctcctc
caccaggagtgccaggacaaggagcagctgatagaccgtctggaggagcagatggctgag
tgggacgaacttcaggcccagctccgggagaaagaccggctcaactgtcattatatggaa
gccctgcaggccgccgagtccaccatcacttatcttacagcctgcaacctggacagaaac
agccagggtggagtactaggctctggttcagagtacaaactccagagacagtgcattgag
ctccagaaagcccttgaggagaaagagagactcaacacccagctggtggagtgcctcaac
atggtcgaggtggccattgcctcgctccccggcacctcgtcatccgccaacgccctggac
ggtcatttggactcccaggagctgtgcgcgaggctggaggcggccttacggcaggtcagt
gcttctcttgaccctctggtcctgaaaacctcggttccagggccttcgggataccccctg
agcctcaacgcggagctgcagcagcaagcggactccctgcaggaggcgctgtgggagcag
agccggctgaacgtcgagctgcaggagaggctgaggtcagctgaggaggctgtcgcagca
cagcagggcactgccaacactgcccccgcaggcctggagggcaattacggcaggcagcca
gaagaagacctgaataagattccgagagggaatgaaacaaaggaacagagagattgggga
aaacatcatggaagaagcaagtttgcgtccgatgtgaagagcagcctaggatctgagcag
gttgccaagcatctctccgagtgtctcagagcagccgagtcggccataggctcactcaca
gctcactgtaccaacacgagcactagcacctctaccacgaccagagcagctcaaaccagc
tctgacttacaacagcagctagacagactacagagaactctacaggagagagaagcattg
gacgacctgggctccactgaacccacccatcaacagaccagtgagaaccccacacgacac
accacccctggggctgaaaccccctctcccctagagctccaccataacatctgcctcctc
cagaaggccttctacgacttgcaggaggagaggggacgcagggagagggaagccaagacg
atggagcctggagcttgggtaccaccacaagatgtccaggcccagctggaaagccttcag
aaggctttgaaggagaggaagagggcctgtaagagcctggaggagaagctggccacggct
cagtccatcatagctctgcagaactcctccaagaagaccagtcatgtagcaacacagaga
gcgccccctctggagcaggaagacaagggcgtgcaggtggacctgcaagacctgggttac
gaaaccagtggcaagagtgaggccgaggtggatagggaggagagcagtagcacagatatg
cagcttgtccctggcagtgctaacagcagcctaccctgcctgctgaagcaggaccaggag
gagccctcgttctcctccacagagaaccttgacacggcctccagtgcctcctaccccagc
tcccccactctcagctcccccaaggtgagtctgaagagcctccagacgtttgactcctac
ggtctgtgtgaagacccggcccagctccaggcccaggtgagggagctgaagacccagcta
gagagccaacaccaggtcatcctccacctgcagaccatgctacgccgccgcgcctccctg
tccagcgaactgttgaccgccacatctgactcccacactgccacgggaggtcacacgggc
tccgagaggggggaggagggtgggaaggaggagaggagccaggagggagagggggaggtg
acgaaggagaagatgaagagtatgagcatggagctggagagggagaggagcgtgaacagg
agtatgagcgagcagctgttgcaggcccagcagcggagtcgatcagcctcacctgccagg
atcgactccctggtgcagtcgcaggcgagggaactgtcccagctgcgtcgtcagatccag
gagagccggggcctgggggcactgcatcggatgcagctggaggagctgtcgcaggccttc
gaggagctgctacaggccagcgacgtggactactacgtgggagaggtgttccgagagcag
ctggacaagagcctgggcgtcctggagaggctagagggccggctggagaaaggagacgct
caactggataacgaggacggggcagcactggagctggcgcaaaggctgtctaaagagtta
caggagaagacccgtctggtccagagtctacagattcagctgcgaggccaaactcctagc
agccaccacagctcagactcggacctgtcggacagggtttctaaccaggccacagcctcc
taccacaacagccccaccctgccagcatgtagcaaactccatggcaaccaggcctatcat
ggaatgaaagagtccaacgggagctcaacgtcggcagcccagcaggatgggggcgtggct
aaggatgggggtgtgtctggccctggggtagtttctggacataaatggagagccaggcag
ctccagggcctgcagagggagaatgggcgcctggtggagcagctgaggagcagcgaggag
cttaacgccacgctgcgctgcgagctggacctccaccgctctatcctggtccaggggatc
tccaccccactacacacccagggagaggggctggggcagagccagggacaggctgggggg
tcaccacagaagagggaggaccagaggggagagggacacccagcttcacagcaggacact
gcccagctatgcagcatgaacccagacctgttagcagaacacctgttggagatcagagcc
ctgagacagcgtctggaggagaccatctacaacaatgaccggctcagagaacagctggag
agaagactgggtgaggtggagagagacccagccaccaacatcttcatccacggtacggag
gagcagggccagctgaccagtgagctgcggttcctctggggacagaaccaggcccttaaa
gagcagctcaacctgggctccagagacaagcagaaggagaacgagaagctgcgtgaggcg
ctggccagacggacggccaagctggagcagagcaggaaggaatgtgaggtcctgagacag
gaacacacacgtcttcaggaccgcctggacaggagcatcctggaacacacacacctccag
gacacactgcactacagccgccaggagatccacaggttgcagtgtgaggtgaagatgcag
agacagcagctgtcagacagtcaacacgtcctccagtctctacgtgtggagctgcaggtc
tacgaacagatcaaaactgggacacacaagcacacagagtccagtggtacagcccaacag
tctggttcagggtctgggtcgaaccaagtggacctgggggagctgctgtcagagatccgc
cacctgaggctgcagctggagaggagcatccagaccaacacgtccctgaggcagaaactg
gaggaacagctgctcagtggtcccaaccgcccagataccatcaatatcaactatctactg
gctacttcagaggttacaggcaggtctcctggttgtgaaggctgtgatcctccccgccac
tcctcctctcacgatctgaagcgtcaagctcagtcagagatggacgctgtgtcacagtgt
agtaacagttctggggacagtatctctggctcggctccccctccatcccgcttggtgccc
ggccaccgcctgtgggccaaccgccaagggcgccacatcctgggtcttatcgaggaccac
aatgccctgcggaagcagatctccgagggaaggaggctcacccgcaccatggacacacac
ctgcaggagtgtgtctgcacactcagccagcaggggactgacaacagggtggtggagcag
ggtcacctgaaggctctgtccagcagtgtgaacactatgcagcaggtcctggaggaggct
ggccagctgctcaaactggtctggagggtatccctgccctctggcactgtgaccgcaacc
agcaaccagcaggatgagctgttgaagaatgagatagctagtctgaagagccgtctgtcc
cagcaggagcggatgctgagcggtgcagtcaaacggctgcggaccaccaaccagctcaaa
gagggcatggagagggtcattattgaccagctgtcgttaacccatggagtgctgaagaag
gccagagggaatctagagacaaattattataccgtctttgggctgaaaggcctgtctgga
ggaccagaggaaggaggtcccggtcaatggtcagtgaccatcggtgcttcagcatcctcc
aagggagtgagtgtcctcagccctgccagcagatacactgaatccccagaggagaggaac
agtgactcctcatcccactgcagctactag
DBGET
integrated database retrieval system
