Oncorhynchus tshawytscha (Chinook salmon): 112220400
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Entry
112220400 CDS
T05605
Name
(RefSeq) tight junction protein ZO-2 isoform X1
KO
K06098
tight junction protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112220400
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
Motif
Other DBs
NCBI-GeneID:
112220400
NCBI-ProteinID:
XP_024238050
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Position
LG20:complement(22707627..22750566)
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AA seq
1286 aa
AA seq
DB search
MKFKKFITIMQAAMGIVPLNKRELLPPGRKLWRPPGDTPSTDQSNTDLFRSSCSWDRFYW
TKEAQCLCLRRLSTPSYSAILRSPVMEETMWEQYTVTLQRDPKMGFGIAVSGGRDNPNEE
SGEMSIVVSDVLQGGPADGLLFENDRVVQVNATPMDGVPHSFAVQILRKCGKVAKITVKR
PRKVPVNLLKHGPYPDDRVFNNNDYDQDRHSVYSGRSGRQDRDHSQERGGYTDAGYQGQG
FDGHYGRDDRGRSMERDLDPERQYRRDGSKGRTLDRERSPDRRYKSDRTLDRDHSPNLRY
RSDLTLDRDPSPDRRFRSERTLDRTNSPDLRYRAGHSPARSHGRDHSFERNRKRVPSDRD
QKKEQMKRSGSRERLDRSPSPASMPIPMSRPPREPEPLEKPVSVLLLKNRPNEEYGLHLG
SQLFIKEMTSTGLACRDGNLQEGDIILKINGTVTENLSLSDAGKLIEKSRGKLQLVVQRD
RRQVLIRIPPLVDSDSELDDISEIGSYRSYSPQDDRRAPTSDLSSHSSNERLRDKPREDP
PSRLAKMGAMPTPFAMPARVSDRVMEDTPPLQAEREESRPETPPAPVVNVAPKVHASPKL
PLRPSIEDQDIYGPSTGMVRFQKGDSVGLRLAGGNDVGIFIAGVQEDSPAEQEGLRTGDQ
IMKVNNMDFRGIVREDAVLYLLEIPKGDDVTILAQSKPDVYKDILASGRGDSFFIRTHFE
YEKEVPQSLPFFRGEIFKVTDTLYDGKLGNWLASRTDKDNQLLEKGIIPNKSRAEQMSNV
QNAQRGTANDRGDFWRLRGQRAVKKKDLRKSREDLTAISVTTRFPAYERVVLREAGFRRP
VVVFGPIADAVNEKLGNDLPEEFVIAKTEPKDAGTEKSSGVVRLNTIRQIIEQDRHALLD
VTPKAVDTLNYTQWYPIVVFLNPDSKGGVKTMRNRLVPGSNRSARKLYEQAVKLRKTCSH
LFTATVDLNSANDGWYGSVKDSIRAQQERAVWVCEGKLDGSEEDLDIHDDRMSYLSAMSA
DYLSMDSRLTSDYDDTADEGGAYTDNELDEPMDEPHQPVSAISRSSEPVLTERPHLAPIP
HMRRSGSREGLRDPSPPPSFVPEPPKQVRVQSRGGYDSHSSSTISSDTAGGTKSAPPPVA
LKPTVALKPTLRALNQSSEDHAVPEGEDPANRSFMGKVKAFEKMDHLARAQRMLELQEAE
QARLEIAQKHPDIYAVPVKLPKPNHNRPQPIGSSSNPEPQTPSSRPPYSESRGHFDDDEE
EYRRQLADQTRRGYYSNPQKYKDTEL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttaagaagttcattaccatcatgcaggcggccatggggatcgtccccctcaac
aaacgagagctcctaccacctgggaggaaactctggagacccccaggggacacacccagt
actgaccagtccaacactgacctgttcaggtccagctgctcctgggataggttctactgg
accaaggaagcccagtgcctgtgtctccgtcgactctctacacccagctactctgctatt
ctgaggagcccagtcatggaggaaactatgtgggagcagtatactgtgacactgcagagg
gaccccaagatgggttttggtattgcggtgtccggggggcgggacaaccccaatgaggaa
agcggggagatgtccatagtagtgtctgacgtgcttcagggagggcccgctgatggcctg
ctatttgagaatgaccgggtggtgcaggtgaacgctactcccatggatggtgtgccacac
tccttcgctgtacagatcctcagaaagtgtggaaaagtagccaaaattacagtcaagagg
cccaggaaggttccggtcaacctgctgaaacacggcccttaccctgacgaccgtgtcttc
aacaacaatgactatgaccaggaccgccacagtgtgtacagtggacgcagtggtcgtcaa
gatcgcgaccacagccaggagaggggaggttacacagacgctggctaccagggacagggc
tttgacgggcattacggtcgagatgaccggggcaggagtatggagagggaccttgatcca
gagaggcagtacagacgagacggcagcaaaggtcggactctggaccgcgagcgtagccct
gaccgccgctacaaaagtgaccgcactcttgaccgtgaccacagccccaatctgcgttac
cgtagtgatctcactcttgaccgcgaccccagccctgacaggcgtttccgtagcgaacgc
actctggaccggactaacagccctgacttgcgatacagagctggtcacagtcctgcccgc
agtcacggtcgcgaccacagctttgagcggaaccgcaaacgtgttcctagtgaccgtgac
cagaagaaggagcagatgaagaggagtgggagcagggaacgtctggaccgttcaccctcc
cccgcctccatgccaatccccatgtcccgccctcctcgggagccggagcccctggagaaa
cccgttagtgtgctgctactgaagaacaggcccaacgaagagtatggtctgcatctgggt
agtcagctgttcattaaggagatgaccagcacaggtctggcctgcagggatggcaacctc
caggagggagacatcatactgaagatcaatggtacggtgacagagaacctgtctctgagt
gatgcagggaagctgatcgagaagtctcgtgggaagctgcagctggtggtgcagagagac
agaagacaggtcctcatcaggattcctcccctggtagacagtgactctgagctcgatgat
atatccgagatcgggtcgtaccgctcctactcgccacaggatgatcgacgggcccccacc
tcagacctgtcttcccattcctccaatgagaggctccgagacaaacccagggaggaccca
ccaagcaggctggctaagatgggcgccatgccgacaccgttcgccatgccggcacgagta
tcggatagagttatggaggacacgccccctctgcaagcagagagggaggagtcccgccca
gaaacgcccccagctccggtagtcaatgttgccccaaaagtccacgcttccccaaagctg
ccactgaggccaagcatagaggaccaggacatatacggccccagcacggggatggtgcgt
ttccagaagggagatagcgtggggctgaggctggcgggaggaaacgatgtgggaatcttc
attgcaggcgttcaggaggacagtcctgcagaacaggagggccttcgcaccggggaccag
atcatgaaggtgaataacatggacttcaggggcatagtgcgtgaggatgctgtcctgtac
ctgctggagattccaaagggagatgatgtcaccatcctggctcagagcaaacctgatgtc
tataaggacatcctggcatcgggtaggggggactctttcttcatcaggacccactttgag
tatgagaaagaggttccccagagcctgcccttcttccggggggagatcttcaaggtgacg
gacacactctatgacggcaagcttggcaactggctggccagccgcactgacaaagacaac
cagctgctggagaagggtatcatccccaataagagcagggccgaacaaatgtcaaatgtg
cagaacgcccagagaggaacagccaatgacagaggagacttctggaggttgagaggtcaa
agagcggtgaagaagaaggacctccgtaagagcagagaggacctgactgccatctctgtc
accacacgcttccctgcttatgagagggtggtcttacgagaagctggcttcaggagacca
gtggttgtgtttgggcccatcgcagacgcagtcaatgagaaactgggaaacgacctgcct
gaagagtttgtcatagccaagactgagcccaaggatgcaggcactgagaagtcctccggt
gtggtgagactcaataccattcgacagatcatagaacaggaccgccatgccctgctggat
gtaactcccaaggcggtggacaccctgaattatacccagtggtaccccatcgtggtgttc
ctcaacccggacagcaagggtggcgtcaagaccatgaggaaccgcctggttcccggctcc
aaccgcagtgcccgcaaactctacgagcaggcggtcaaactgaggaagacttgttctcac
ctcttcaccgcgaccgttgacctgaactcagccaatgatgggtggtacgggagtgtgaag
gactctatccgagcacagcaggagcgggccgtgtgggtctgtgagggcaagttggacggc
tcggaggaggacctggatatccatgacgaccgcatgtcatacctgtcagcgatgagcgct
gactacctgagcatggacagccggctgaccagtgactacgacgacacagccgatgagggc
ggggcttacaccgacaacgagctggacgagccaatggacgagccccatcagccggtgtcg
gcaatcagccgctcctcagagcccgtactgacagagagaccccatcttgcccccatacca
catatgaggagatcagggagcagagaggggctgagagaccccagtccacccccctccttt
gtccctgagccccccaagcaggtgagggtgcagtctcgcgggggctatgactctcactcc
agtagcaccattagcagcgacactgccggggggaccaagtcagccccgcctccagttgcc
ctcaagcccaccgtggcccttaagcctactctgagggcactcaaccagtcatctgaggac
cacgctgtcccggagggagaggacccggccaaccgctccttcatgggcaaggtgaaggcc
tttgaaaagatggaccacctggccagagcccagaggatgctggagctccaggaggctgag
caagcacggctggaaatagcccagaagcacccagacatctatgcagtcccagtgaaacta
ccaaagcccaaccacaaccgcccacagccaataggctccagctctaacccggagccccag
accccatcctccaggccaccgtactctgagagtaggggtcatttcgacgatgatgaggaa
gagtaccgcagacagctggctgaccagaccagacgaggctactacagtaacccccagaaa
tacaaagacactgagctgtag
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