Oncorhynchus tshawytscha (Chinook salmon): 112220893
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Entry
112220893 CDS
T05605
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
otw04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112220893
04020 Calcium signaling pathway
112220893
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112220893
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112220893
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112220893
Protein kinases [BR:
otw01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
112220893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_VEGFR-1-like_5th
Ig_3
I-set
Pkinase
Ig_2
ig
VEGFR-2_TMD
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Ig_4
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
112220893
NCBI-ProteinID:
XP_024238618
UniProt:
A0A8C8CSJ6
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All DBs
Position
LG21:10413245..10485845
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AA seq
1235 aa
AA seq
DB search
MAPLDCAKLSILLHLITYITGQVSLPAPLLLPSGDTHLRHTGKSLTLTCRGAAQLHWRLP
WRDVTSEGVRVEECEPQLHTHCSKLLVSHLSPNDTGLYSCRYTQPSADFSSTYIYVKDHQ
HPFVEHHFPIPYTLFTYRHEATLVIPCRTTSPDQIVTLEGLPPLSEDIEQWKEWDPKIGF
VIPYGPYKSFRLLTCVTNVDGQQVQSQYIPLRQTNFLRNVKINPERIKLLVGDTLVLNCS
AETTFNGRINFQWEYPKRMVNRNPTVNKIRENPALITRMYKAITLSNITMDDRGMYRCTA
EIGNAEMGKKKHASAKVTIYEHPYLNVSYKNEWARRVVYTEGRNKLMFEPKVNALPPTDT
IAWYKDGVPINENSTCYESSGYNLLIKDVKQKDAGVFTIALGNKERGLYRNLSYTLVVRV
RPMISEEEVASVDVQPYMFGKQHQLTCTAFGVPMPDITWLWQPCHPDPTDKECTLYTEPI
PVQMDDKGNYSHNWIESINNQTELVKGKNKTVSTLVVGAANVTGIYSCAAQNKLGTRTLR
TPFYVDDHPQHLAIEPQTAIEGDDVTLTCRGTRYLYTDLQWKDPQNSTITNNVTALQFSP
YSISLSLSLHNVSRNHTAGYQCWAHKIHNKRAIVKTVLTVHERKRPWLRQNLTNQDVNSS
STLTMACYALGVPPPYITWYKDNLPVQEGPGISLREDGVLTIKRVKKDDEGFYECLASNG
EGSVKASAVVTVVGDEGKPNIEVIVLVCTGAAATFLWLMLILFIRKLRKSVDYKMGPSII
IDPDEFPLDEQCELLQYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKTV
AVKMLKGGATTNERKALMSELKILIHIGHHLNVVNLLGACTKPGGPLMMIVEYCKYGNLS
NYLRSKRADFIVYKSQDGKLVTSGSGCDLSELIKRRLESVASTGSSASSGFVEDKSYCDS
EEEEEEPEDLYKRVLTMEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKIC
DFGLARDIYKDPDYVRKGDSRLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGASP
YPGLHIDEEFCCRLKEGTRMRAPEYSSSEIYQTMLDCWQGESGDRPTFTELVERLGDLLQ
ASVQQEGKHYIPIAALLSKEGDPSNTSRSEETNTRPLSHRDSGSTWNIRPGSVKTFDEVT
MENSSNDNHEGGQSDSGMGLSSDDGNTLKRLESFA
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggccccgctcgactgcgcgaaactgtcaatcctccttcatttgatcacatatatcacc
ggtcaggtcagcctaccggcccctcttctgcttccctctggggacacacaccttcgccac
actgggaagtcactcaccctcacctgcagaggtgccgcccaactgcactggaggctgccc
tggcgggacgtcacctcggagggggtgcgcgtggaggagtgtgagccccagctgcacacc
cactgcagtaagttgctggtgagccacctgagccccaacgacacgggcctctacagctgc
aggtacacccagccctccgccgacttcagctccacctacatctacgtcaaagatcaccag
catccgtttgtggagcaccatttccccattccatacactttgtttacatacagacatgag
gccaccctagtgattccctgtagaacaacttctcctgaccagattgtcactcttgaaggg
ctgccacccttatcagaggatatagaacaatggaaggaatgggaccccaaaataggcttc
gtgatcccatatggtccctacaaatcctttcgtctcctgacctgtgttaccaacgtcgac
ggccaacaggtccagtcgcagtacatccctctgaggcaaactaacttcctgaggaacgta
aagatcaaccctgaacgtatcaagctgttagtgggagatactctggtcctcaactgctct
gcagagaccaccttcaacggaaggatcaacttccaatgggagtacccaaagaggatggtc
aataggaaccccaccgtcaataagatcagagagaatccagctttgatcaccaggatgtac
aaagccatcaccttgtccaacatcaccatggatgacaggggcatgtacaggtgcacggcg
gagatagggaacgctgagatggggaaaaagaagcacgcctcagccaaggtcaccatctac
gaacatccatacctgaatgtgtcctataagaatgaatgggccaggagagtagtctacaca
gagggtagaaacaagctgatgtttgaacccaaggtcaatgcactgccaccaaccgacacc
atcgcatggtataaggatggcgtccccatcaacgagaactccacttgttacgagtcttca
ggctacaacctactcatcaaagacgtgaagcagaaggatgctggggtcttcaccatcgcc
ctgggcaacaaggagagaggcctctacaggaatctcagctacactctggtagtccgagtg
aggcctatgatctcagaagaggaggtggcctcggtagacgtccaaccatacatgttcggc
aagcagcaccagctaacctgcaccgcctttggagtgcccatgcccgacatcacgtggctc
tggcaaccatgccaccctgaccccaccgacaaagagtgcaccctttacactgagccaatc
ccagttcaaatggacgataaagggaactactcacacaactggattgagagcataaacaac
caaactgaactggtgaaaggaaagaacaagactgtgagtacgctagtggtgggagcggct
aacgtcacagggatctactcctgcgcagcccagaacaaacttggcacccgtacactgaga
acccccttctatgtggacgatcaccctcagcacctggccattgagccccagactgccatc
gagggtgacgacgtcactctgacctgcagggggactcggtacctgtacacagacctgcag
tggaaggaccctcagaactccaccatcaccaacaacgtcacggccctgcagttcagcccc
tactctatctctctctccctaagcctgcacaatgtgtccaggaatcacacagcaggctac
cagtgctgggcgcacaagatccacaacaagagagctatagtcaagactgtgctgactgtg
catgagaggaagaggccgtggctgagacagaacctgaccaatcaagatgtaaacagcagc
agcactctgactatggcctgctatgccctgggtgtgccgccaccctacatcacctggtac
aaagacaacctaccagtacaggagggtccaggtattagcctgagggaggatggggtgctg
acgatcaagagagtgaagaaagacgatgagggcttctacgagtgtctggccagcaacggt
gaggggagtgtgaaagccagtgctgtggtcactgtcgtgggtgatgaggggaaacccaac
attgaggttatcgtcctggtgtgtacaggagctgctgccaccttcctctggctcatgctc
atcctcttcatccgcaagctgaggaagtctgtggactataaaatgggtccatccatcatc
atcgacccagacgagtttcctctggatgagcagtgtgaactcctgcagtatgacagcagc
aagtgggagtttccccgagaccgcctcagactgggcaaaactctgggccatggagccttc
gggaaagtggtggaggcttctgcttttgggatcgacaagctctcgacctgcaagactgtg
gctgtcaaaatgctgaaaggaggagctacgacaaatgagcgcaaggctctgatgtccgag
ctgaagatcctgatccacattggtcatcatctgaacgtggtcaacctgctaggagcctgc
accaagcctggaggtccattgatgatgatagtggagtactgcaaatatggaaacttgtca
aactacttgagaagcaagagggcggatttcatcgtctataagagccaggacggtaagctg
gtgacgtcggggtcgggctgtgacctcagcgagctcatcaagcggcgcctggagagcgtg
gcaagcaccggaagctcggccagctccggctttgtggaagataagagctactgcgactca
gaggaagaggaggaagagccagaggatctgtacaagagagtattgacaatggaagatttg
atttgctacagtttccaagttgcaaaaggcatggagttcctggcttcacgcaagtgtatt
catcgtgacctggctgcaagaaacatcttactgtcggagaataatgttgtgaagatttgc
gattttggactggccagagacatctacaaagacccagactacgttcgcaaaggagattcc
agactgcccctcaagtggatggcgccagaggccatttttgacaagatctacaccactcag
agcgatgtgtggtcctttggagtcctaatgtgggagattttctctctgggtgcctctcca
tatcctggcttacacatcgacgaggagttctgctgccgactgaaggaagggaccaggatg
agagctccggaatactcctcctctgagatataccagaccatgttggactgctggcagggc
gagtcaggagaccggccaaccttcactgagctggtggagagactaggagacctgctacag
gccagtgtacagcaggagggcaagcattacatcccaatagcagccctgctgtccaaggag
ggagacccctccaacacgtcccggtcagaggagaccaacaccaggccgctctctcaccgc
gactcagggagcacctggaacatccggccgggaagtgtgaagacctttgacgaggttacc
atggagaacagctctaacgacaaccatgaggggggacagtcggacagtgggatgggcctg
tcgtctgacgatgggaacacgctgaagcgcctggaatcttttgcctga
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