Oncorhynchus tshawytscha (Chinook salmon): 112220986
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Entry
112220986 CDS
T05605
Name
(RefSeq) RE1-silencing transcription factor B
KO
K09222
RE1-silencing transcription factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112220986
03036 Chromosome and associated proteins [BR:
otw03036
]
112220986
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112220986
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
112220986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-H2C2_5
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
112220986
NCBI-ProteinID:
XP_024238785
LinkDB
All DBs
Position
LG21:complement(13604716..13612909)
Genome browser
AA seq
986 aa
AA seq
DB search
MASQTVYPMGLVMYATSAGMPLVEDAQGLAELPQNELPAPQLVMLANVACENPTEGKEMM
ELQTVGSSSYSDSEDENIIRYSYDSHEREMCIVDYPESPRVALSQVEEIDNEVEEEEGLD
LSKPSEQLPSSPPTPFTPSTPLGMIMESAKKKKPFFCKPCNYQAQREEEFVTHIQIHSAN
RMIVVKRVEGDKARAKETLAGPDQEAESGDGGANNKGVIRCERCGYNTNRYDHYMAHLKH
HEKEGDDQRVYKCTICTYTTVSQYHWRKHLRNHFPSKLFTCNQCCYFSDRKNNYVQHIRT
HTGERPFRCPYCEYSSSQKTHLTRHMRTHSGERPFKCDRCNYLAANQHEVTRHSRQVHNG
PKPLCCPHCPYKTADRSNYKKHVELHLNPRQFLCPVCKYAASKKCNLQYHIKSRHPGCPQ
IAMDVSKVKLRVKKPDSDEFADEYTIVNGIAKFELSAINDEEEDMEERPEISGADKQSSH
INLSTKKSSNPGPLQAAESVATDKTHKKCCVSPVKETPKKAKDKAEKKVTLKRKSTEMSS
ENTKQHVTLKETAAAVQTTGYKVKRRPKKQMKGKMSVQDKSEIKETMEKVQKASLEEDDV
EKEKSVKETLEKDMLERENMEENKKLEKEKKEQLGTLKNEREGKENKNTTKSKKSPSKKI
KKVVDKTVAKAPQSLDAPVEKQGEKSRTKPLKRKAAEALDLSMKESPEEPCTNIKAKRLK
IKAGHKSQSKASIRQSMTTEPCPVSEQENPANQIMNSPVKKCNKTEASYEETEAFSENKR
CSIIENPISLPENKKGPATKLQPTVLQGEQKASDQETLPAMHTSTSQDTTPQAEQGKVAD
HSEETPTPEDESPSPTEIDGSPDFRRPQGEPSTPTTPSLELPRPRGKPTETEEDEGIHSH
DGGSEISDSASEGSDDSGLNGLAAAAGKLANDPETPTEEIPTPTELKSHMCIFCDRTFPL
EVEYRRHLNRHLVNVYYLDNASKLDQ
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcagacagtatatccaatggggttggtcatgtatgccacctcagctggcatg
cccttggtggaggatgcccaggggttggctgagcttccacagaatgagctgccggcccca
cagctggtcatgctcgccaacgtagcctgtgaaaatccaaccgaagggaaggagatgatg
gagcttcaaaccgtcggcagcagcagctactccgatagtgaagacgagaacatcatcaga
tacagttacgatagccatgagagagagatgtgtattgtagactacccagagtctccacgg
gtggccctttcacaggttgaggagattgacaatgaagtagaagaggaagaagggctggac
ctgtccaaaccctctgaacagctcccttctagccctcccaccccttttaccccttctacc
cctctgggcatgatcatggagtcagctaagaagaagaaacccttcttctgtaaaccctgc
aactaccaggcccagcgagaggaggagtttgtaacccacatccaaatccacagtgccaat
aggatgatcgtggtgaaacgcgtggagggggacaaggcacgggcaaaagagactttggcg
ggaccagatcaagaggcggagagcggtgatggtggggccaacaacaaaggggtgatccgc
tgtgagcgctgcggctacaacaccaaccgctacgaccattacatggctcacctcaagcac
cacgaaaaggagggcgacgaccagagggtctacaaatgcaccatctgcacttataccacc
gtcagccagtaccactggaggaagcacctcaggaaccatttccccagtaagctcttcacc
tgcaaccagtgctgctatttctcggaccgtaagaacaactacgtgcagcatatccgcacc
cacacaggggagcgtccttttcgatgtccgtactgtgagtactcaagctcccagaagacc
catcttaccaggcatatgagaacccactcgggtgaaaggcctttcaaatgtgaccgctgc
aactacctggctgccaatcagcatgaggtgacacgccattccagacaggttcacaatggg
cccaagcccctgtgctgcccccactgtccatacaagacggctgatcgcagcaactacaag
aagcatgtggagctccacctcaacccgcgtcagttcctttgtcctgtctgcaagtacgcc
gcttccaagaagtgtaacctgcagtatcacatcaaatccagacatcccggctgcccacag
attgcaatggatgtgtcaaaggtcaagctgcgtgtcaagaaacctgattctgatgaattt
gctgatgagtacaccatcgtgaatggaattgcaaagtttgagctgtctgcaattaatgat
gaggaggaggacatggaggagagaccagagatctctggagctgataaacaatcaagccat
atcaatctctcaaccaagaagagcagcaatcccggccctcttcaagctgcagaaagtgta
gcaacagacaagacccacaagaaatgttgtgtctcccctgtcaaagagacacctaaaaag
gcaaaggacaaggcagagaaaaaggtaacactgaaacgcaagagtacagagatgagcagt
gagaatacaaagcagcatgttaccctgaaggagacagcagctgcagttcaaaccacaggt
tataaagttaagagacgtcccaaaaaacagatgaaggggaaaatgagtgttcaggataag
agtgaaataaaggaaaccatggaaaaagttcaaaaggcgagtttggaagaggacgatgtt
gagaaggagaaatcggtcaaggagacgttagagaaagacatgctggagagggagaatatg
gaggaaaacaagaagctggagaaggagaaaaaagagcagctgggaacactgaagaatgag
agggaaggaaaagagaacaaaaacacaacaaaatctaagaagagtccttctaaaaaaatt
aagaaagtggttgataagactgttgcaaaagcacctcaaagtctggatgcaccagtggaa
aaacagggagagaagagcaggacgaagccgctaaagagaaaggctgccgaggccttggac
ttatcaatgaaggaatctcctgaggagccctgcaccaacataaaggccaaacggttaaaa
atcaaggctggtcacaagtcacaatcaaaagccagtatccgccaaagcatgacgactgag
ccttgcccagtgtcagaacaggagaacccagcaaaccagattatgaactcgcctgtgaaa
aagtgcaacaagacagaagcaagctatgaagagactgaggctttcagtgagaacaagagg
tgttccatcattgagaaccctattagcctccctgaaaacaaaaagggtccagctacaaag
cttcagccaacagttctacagggagagcagaaggcgtctgaccaggagactctccccgct
atgcatacctctacatctcaggacacaactccacaggctgagcagggtaaggtcgccgac
cattcagaggaaactcctactcctgaagacgagtccccatctcccacagaaattgacggc
tctcccgatttcagacggccacagggagaaccatcaacaccaacaacaccctccctggag
ctccctaggccaagaggaaagcctaccgaaactgaagaggacgagggcatccacagccat
gacggaggaagtgagatcagtgatagcgcctcggagggcagcgacgactcggggctcaac
ggactggccgctgccgccggcaaactggccaatgaccctgaaactcccacagaagagatt
ccgactccaactgaactcaagagtcacatgtgtattttctgcgaccgtaccttccccttg
gaggtggagtaccgtcggcacctgaatcgccacctggtgaatgtgtactatcttgacaat
gcatccaagctggaccagtga
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