Oncorhynchus tshawytscha (Chinook salmon): 112221034
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Entry
112221034 CDS
T05605
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
otw04217
Necroptosis
otw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112221034
04137 Mitophagy - animal
112221034
09143 Cell growth and death
04217 Necroptosis
112221034
04218 Cellular senescence
112221034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112221034
03029 Mitochondrial biogenesis [BR:
otw03029
]
112221034
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112221034
Membrane trafficking [BR:
otw04131
]
Autophagy
Mitophagy
Cargo receptors
112221034
Pexophagy
112221034
Aggrephagy
112221034
Xenophagy
112221034
ER-phagy
ER-phagy recepters
112221034
Other autophagy associated proteins
Midbophagy
112221034
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
112221034
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112221034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
CamS
Motif
Other DBs
NCBI-GeneID:
112221034
NCBI-ProteinID:
XP_024238866
LinkDB
All DBs
Position
LG21:15992925..15998281
Genome browser
AA seq
454 aa
AA seq
DB search
MSMTVKAYLLGKEDAPKEIRRIAVDQDVSTSFEYLKKKVEDVFSTLRNVTYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDYTFRLFIKEKKEHRREFPAFAFPGGVPPFAFPPPPGTPHM
GHPPPHGSHGHHGHGPPMVHPNVTCDECEGSVAGTRFKCTVCPDYDLCSTCQAKGLHKEH
VLLPIWHPFNNAFEWFPRGKWMRKMRHCTWAQAQSQAQPGPSGSQPGQAAPGDRQPSAAS
QQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVELEAKRTKVMTPNPSPPGSGGPATARSN
NGTGVSEGDGTKEGDMEVDGLSSLGSASDLAMGGKDPGGSGDDEWTHLTSKEVDPSTGEL
QSLRVGEEGSLEAPGSPVPQGPSQEPQKSLTLAEAAAYPHLPQDADPRLVESLSQMLAMG
FTDEGGWLTRLLHTKDCDVGAALDTIHYSKPAKK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaccgtcaaagcctatctccttgggaaggaggatgcgccgaaagaaattcgt
cgcattgctgtggaccaagatgtttcaacgagttttgagtatctgaaaaaaaaggttgag
gatgttttctcaaccctgcgaaatgtcacctatcaaatgttttacaaagatgaagacggt
gacatgatcgccttctccactgatgatgagctcatcatgggtctcacctgcatcaaggac
tacaccttccgcctcttcatcaaggagaagaaggagcataggcgtgaattccctgctttt
gccttccctgggggtgtcccccctttcgccttcccccctccccctggaacacctcatatg
ggacatcccccacctcatggttcccacggtcaccatggtcatgggccacccatggtgcac
cccaatgtgacctgtgacgaatgtgagggctcggtggcggggacccgcttcaagtgcaca
gtgtgccctgactatgacctgtgttccacgtgccaagccaaggggctacacaaggagcac
gtcctcctgcccatttggcaccccttcaacaacgcatttgagtggttccctcgtgggaag
tggatgaggaagatgaggcactgcacgtgggctcaggcccaaagccaggcccagcctggt
ccctctgggtcccagccaggtcaggcagccccaggggacagacagccctctgctgcctcc
cagcagtcccaagccaatatggattacctgaagaacattggagaaggggtggcagccatg
cttagcccactgggtatcgatgtggatattgatgtggagctggaggcaaagaggaccaag
gtgatgacccccaatccgtccccacctgggtcaggaggccccgccactgctaggagcaac
aacgggacaggggtgtccgagggagatgggactaaagagggggacatggaggtggacggg
cttagcagcctagggagcgcgagtgatttagctatgggtggtaaagacccagggggcagt
ggtgacgatgagtggacccacctgacctccaaggaggtggatccctctactggtgagctc
cagtctctaagggtaggcgaggagggctctctggaagccccggggtcccctgtcccccag
ggtccctcacaggaaccacagaagtccctgactctcgctgaggccgcagcctacccccac
cttcctcaagatgccgacccacgcttggtggagtccctgtcccagatgctggccatgggc
ttcacagatgagggtggctggctcacccgcctcctccacactaaggactgcgatgtcggg
gccgccctggacaccatccactactccaaacccgccaagaagtaa
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