Oncorhynchus tshawytscha (Chinook salmon): 112221056
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Entry
112221056 CDS
T05605
Name
(RefSeq) glutamate receptor 2 isoform X1
KO
K05198
glutamate receptor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112221056
04082 Neuroactive ligand signaling
112221056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112221056
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glutamate (ionotropic)
112221056
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
112221056
NCBI-ProteinID:
XP_024238895
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Position
LG21:17721017..17777245
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AA seq
917 aa
AA seq
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MPKLMNSSVFFLPVLWGLALGGSQSVQIGGLFPRGADQEYSAFRIGMVQFSTPEFRLTPH
IDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDGT
HQFIIQMRPDIKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAERKWQVMAINVG
NLKDERKDEAYRSLFQDLENKKERRVILDCEQDKVRDIMEQVITIGRHVKGYHYIIANLG
FVDGDLSKIQYGGANVSGFQIVDFDDPLVSKFDQIWEALEEKEYPGADSKIRYTSALTYD
SVQVMTEAFRYLHKQRIDIARKGNNGDCLANPAVPWAQGVEIERALKQVRVDGLTGNIQF
DQHGKRVNYSVNIMELKNNGPVKIGYWNEVDKMAVTKSDVFPNDTTGMENKTVIVTTILE
APYVMLKKNADLFLDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNG
MVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLA
YEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGA
FMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQT
EISYGTLDSGSTKEFFRRSKIALFDKMWTYMRSAEPSVFVKTTAEGVLRVRKSKGKYAYL
LESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQGLLDKLK
NKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAK
RMKVAKNAQSDLHGRDEEQSEAVYNGEYWGERPCDDSRVSESSACSTLRETWHGNERQLD
RSLLIDKNLSSALHWFQ
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcttatgaattcatcggttttctttctaccagttttatggggtttggcgctt
ggtggctctcaaagtgtacaaattggtggactctttccaaggggtgctgatcaggagtac
agtgcatttcggataggaatggttcaattcagcacacccgaattcagattgacgccccat
attgacaatctggaagtagcaaacagttttgctgtcaccaattgtttctgttcccagttc
tcgagaggagtttacgccatctttggattctacgacaagaagtcggtcaacacgattacg
tcgttctgtgggactctgcatgtgtcatttatcacccccagcttcccgctggatggaact
catcaattcatcatccagatgaggcctgacatcaaaggacccctactcagcctcattgag
tactacaagtgggacaagtttgcctatctctacgacagtgatagaggtttgaccacgctg
caggtggtgctggacacggctgcggagaggaagtggcaggtgatggccattaacgtgggc
aacctgaaggacgagaggaaagacgaggcctatcgctccctcttccaggacctggagaac
aagaaggagagacgggtcatcctcgactgtgaacaggacaaagtccgagacattatggag
caggtcatcaccattggcagacatgtgaaaggctaccactacatcattgcaaatttgggt
tttgtggatggggacctctccaaaatccaatatggcggagccaacgtgtcaggtttccag
attgtggattttgatgaccctttggtgtccaaatttgaccagatttgggaggctctggag
gagaaggaataccctggtgccgacagtaagattaggtacacatctgcgttgacctacgac
tcagtgcaggtgatgacggaggccttccgctacctgcacaagcagcgcattgacatcgcc
aggaagggcaacaacggcgactgtctggccaaccccgctgtgccctgggcgcagggagtg
gagatcgagcgcgcactcaaacaggttcgtgtggacggcctcacagggaacattcagttc
gatcaacatggcaaacgagtcaactactcagttaatatcatggagctgaaaaataatggt
cctgtgaagattggatattggaacgaagttgacaaaatggctgtcacaaaatcagacgtg
ttcccgaatgacacaacagggatggaaaacaaaactgtcattgtgaccacaatcttggaa
gccccatatgtaatgcttaagaagaacgctgacctttttctagacaatgaaagatacgag
ggctactgtgtagatttggccgctgagatagccaagcactgcggcttcaaataccagctg
aaaattgtgggggatggaaaatatggagcccgagacgctgagaccaagatctggaacgga
atggtgggagagctcgtctatgggaaagctgatatagccgtggcaccgttgaccattacc
ctcgtccgagaagaagtcattgacttctccaagcccttcatgtccttggggatctccatc
atgatcaagaagccccagaagtctaaacctggagtcttctctttcctggaccctctggcc
tacgagatctggatgtgcatcgtgtttgcctacatcggtgtgagcgtggtgctcttcctg
gtcagccgattcagcccatacgagtggcacacagaggagtacgaggatggccagatccag
actaatgaatcgaccaacgagtttgggatattcaacagtctctggttctccctcggcgcc
ttcatgagacagggctgtgacatctcgccaagatccctctctgggcgtattgtgggaggg
gtgtggtggttcttcaccttgatcatcatctcctcctacacggccaacctggctgccttc
ctcactgttgagaggatggtgtcgcccattgagagtgctgaggatctggcgaagcagacc
gagatttcctatggaacactggactccggcagtaccaaggagttttttaggcgctccaaa
attgccctattcgataagatgtggacttacatgcggagcgcagagccctctgtgttcgtg
aaaaccacagcagagggggtgctgcgggtgcgcaagtccaagggcaaatacgcctatctg
ctggagtccaccatgaacgagtacatcgagcagaggaagccctgcgacaccatgaaggtc
ggcggcaacctggactccaaaggctatgggatcgccacgcccaaaggatcctcattaaga
aatgcggttaacctcgcagtactaaaactgaatgagcaaggcctgttggacaaattgaaa
aacaaatggtggtacgacaaaggagagtgcggcagcgggggaggtgattccaaggagaag
acgagcgccctcagtctgagcaacgttgctggggtcttctacatcctggtcggcggactt
ggtttggccatgctggtggccttgattgagttctgttacaagtcccgagccgaggcgaaa
cgaatgaaggtggcaaagaatgcacagagtgaccttcacggacgcgatgaggagcaaagc
gaggctgtctataacggggagtactggggagaacggccgtgtgatgactccagagtttcc
gaaagcagtgcatgcagtaccttacgtgagacctggcatgggaatgaacgtcagcttgac
agatctctcctgatcgataagaacctttcgagtgccttacactggtttcaatag
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