Oncorhynchus tshawytscha (Chinook salmon): 112221386
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Entry
112221386 CDS
T05605
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112221386
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
112221386
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT
Atx10homo_assoc
HEAT_2
Motif
Other DBs
NCBI-GeneID:
112221386
NCBI-ProteinID:
XP_024239308
UniProt:
A0A8C8BTI9
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Position
LG02:complement(13656723..13669010)
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AA seq
760 aa
AA seq
DB search
MMTMDPLKSAISIGNVEETSLALPSDNKLRSKQQRVLDQVQTIKRGKSKYSKNGSLSSPT
KSPTSPMYVSVFTDSIKSPTSPNGIVFSNGTNGLSRTLSHEQSTKRMVLSSKGSTVQRNM
SSSSQWERRLPLSPPIARGQRNSSHSVPDADPFPFPTTTQRPAQAPASALQQFQSSAPAR
QLQSNRSSFFLTERGNSQFISNDNGPSQVIVNSNDVQKRHSQLIGTRQTKSSGQITSSHT
RIERAPSNPSMAEPKISMVKSKIEAGMNDYGQLADITMAEAVQYLSSGDVNYQHYGASFI
QHSTYSEDKAKQEVLRLKGIPPLVNLLRSPSPQVQQTASAALRNLAFKDAGNKEEVQRCG
GITESLALLRDTDSTETQKQLTGLLWNLSSADSLKPELVRSALPVLTETVVVPYTGGVDE
TNKNLDPEVFYHATACLRNLSCATQSNRQAMRNCRGLIDSLGSYVQECVASERPDDKSVE
NCVCVLHNLSFQLESEAPALFSRITALAGTISRANASAETGPIGCFSQQSSKVQEQENHF
DYPVMEEQHPKGAGWLFHSKTMQSYLSLLRSSQREDTLEACCGALQNLTANQGIVSRVMS
QTIVQKLNGLPEISPLLQSSNPSLQKTAVALVGNLAKNQRLQSIMARQTFPELVGILSSW
TKEGTESDDTLAMACQTSHSLLMKEPELGKRLLSNNLVNSLNDLSKNRLFPKASKAAGVL
LYSLWSEKDIQSFLKKQGMNKGSFVNDITSVAHRSVQVVE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggacccgttgaaatcggccatatccattgggaatgtggaggagacatct
cttgctttgccgtccgataacaaacttcggtccaaacagcagcgtgtcttggatcaggtg
caaaccattaagaggggcaagtcgaagtacagtaaaaatggatctttatcgtcgccaacg
aagtcgccaacgagtcctatgtacgtcagcgtattcactgactccattaagtcacctacc
agtcccaatggaattgtcttctcgaatggtacaaatggcctctcaagaacgcttagccat
gagcagagcaccaagcgaatggtactgtcctccaagggatctactgttcagagaaacatg
agcagctccagccagtgggagagacgattacctctcagtccccccatagccaggggtcag
cgcaacagcagccacagtgtgcctgatgcagaccccttccccttccccaccactacacag
cgccctgcccaggccccggcttcagccctgcagcagtttcagtcctcagcccccgcccgg
cagctccaatccaacagatccagcttcttccttactgagaggggtaacagccagttcatc
tccaatgacaacggcccctctcaggtcattgtcaacagcaacgatgtgcagaaaaggcac
agccagttgattggcacccgtcagacgaaaagcagcggccagattaccagcagccacact
cgtattgagagggcaccatcgaacccctccatggccgagcccaagatatcaatggtcaag
agcaagattgaagcagggatgaatgattatggccagcttgctgatattaccatggcggag
gcggtgcagtacctgtccagtggagatgtgaactaccagcactatggcgcctcattcatc
caacactctacctactcagaggacaaggccaagcaggaggtgttgcggctcaaagggatc
cctcctctggtgaacctgctgaggagtcccagtccccaggtccaacagacagcctcggcc
gccctgcggaaccttgcctttaaagatgcgggcaacaaggaggaggtccagcgctgtggg
ggcatcactgagtccctggccctgctccgagacacagactctaccgagacacagaaacaa
ctcacaggtctcctttggaacctgtcgtctgcagacagtctgaagccggagcttgtgcgt
agcgctctgcctgttctgactgagactgtggtagtaccttacacaggaggagtagatgag
accaacaagaacctggacccagaggtcttctaccatgctacagcatgtctacgaaatctg
agctgtgcgacgcaaagcaacaggcaggccatgcgtaactgtcgaggcctcatcgactct
ctgggcagttatgtccaggagtgtgtagcatcagagaggccagatgacaagtctgtggag
aactgtgtctgtgtcctacacaacctgagcttccagctggagagtgaggccccggccctg
ttcagccggatcactgccctggccgggaccatcagccgggccaacgcctcagctgagacc
ggccccatcggctgtttcagccaacagagcagcaaggtccaggagcaggagaatcacttt
gactaccccgtgatggaggagcagcatcctaaaggagcgggctggctcttccactccaag
actatgcagagttacctgtctctgctgaggtccagccagagagaagacaccctggaggcc
tgctgtggagccctgcagaacctcaccgctaaccaaggcattgtttctagagtgatgagc
cagaccattgtccagaagctgaacggcttacctgaaatctctcccctgctgcaatcctcc
aaccccagcctacagaagactgctgtggctttggtgggaaacctagccaagaaccaacgc
cttcagagcatcatggcccgacagaccttcccagagctggttggcatcctcagctcatgg
accaaggaagggacagagtctgacgacaccctggctatggcgtgccaaaccagccacagt
cttctgatgaaggagcctgagctggggaaacgcctgctgagcaacaacctggtcaactca
ctcaacgacctgagcaagaacaggcttttcccaaaggcaagcaaagctgcaggtgtgctc
ctctacagcctctggtcagagaaggacatacagagtttcctaaaaaagcaagggatgaat
aagggttcctttgtgaatgacatcaccagcgtggctcacaggtctgtgcaggtcgttgag
taa
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