Oncorhynchus tshawytscha (Chinook salmon): 112221521
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Entry
112221521 CDS
T05605
Name
(RefSeq) rap guanine nucleotide exchange factor 3 isoform X1
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04081
Hormone signaling
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
112221521
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
112221521
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GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
112221521
NCBI-ProteinID:
XP_042159724
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Position
LG22:13610058..13660009
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AA seq
876 aa
AA seq
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MAEEVSATASAMFSMDTFFKSILLPSRRITPEEGETPLPEALDTQDTMKQFLSDRILKAA
RVVYSALIERSPGLIRDRKHHLKTYRQCCSGKELVDWLMKLNECFQSRSQAVGMWQVLVD
EGIIVHVKQELNFHDKDTQFYRFLDLEFGLNHMTNEKDQLDDELQEGLSLLLQIGPDALL
TMILRKCPSQRSAEDMEVIYEELLHVKAAAHLSTSVRKELAAVLMFESHAKAGTVLFSQG
DKGTSWYIIWKGSVNVITHGKGLVTTLHEGEDFGQLALVNDAPRAATIILREDNCHFLRV
DKQDFIRILKDVEANTMRLEEHGKAVLVLEKAESTNPGGAGNSSKYTVMAGTPEKILEHL
LETVKLDTNGSDAIDPCVSDFLLTHRVFMPSSQLCPALQHHYHAEPSEGSDLEKAAYALN
TKQKIVKLICQWVALFGQLLKDDPIAVDFLETLGEEVAGDSRLSSMLREQLRDRRRTRML
ENELGSLTRLNHQFDWFSSCEEPVGKCLPIRSKDKVLYEIFRPDHTSITLMLPVNTSVQE
MMSSLVNPGGDHVLVKMNSMGDRAQLKLDATAVYTSLGLNERLFLCTATQVEQLMPLKEQ
QGPDQSTIDTLEQMCSKDIASQLTNYDWELFTAMHEVELVYYIFGRHKFQGATTANLERF
VHRFNEVQYWVVTEVCLCADLMKRAMLLKKFIKMAAMLKEQKNLNSFFAVMFGLSNSAVQ
RLYKTWERVPSKTKRVYCAYERLMDPSRNHRAYRLAVAKLSPPYIPFMPLLLKDMTFIHE
GNKNYTEKLVNFEKMRMIAKTVKIVRGCRSTPYVPSSPQKGLADRMFLEAPSIRVSTYSE
QSLPLRNPSNIRHYVQNFEVIDNQRKLTQLSRGMER
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggtttcagcaacggcttcagccatgttctccatggataccttcttcaaa
tctatcctgttgccgtccagacggataacaccagaggagggggaaaccccactgccagag
gcccttgacacacaggacaccatgaagcagtttctgtcggatcgaattctgaaggcagcc
agggtggtgtacagtgccttgatagagcgtagccctggcctgatcagagacagaaagcat
cacctgaagacctacagacaatgttgttcggggaaagagcttgttgattggctgatgaag
ctaaacgaatgcttccaatcaaggagccaggcagttggcatgtggcaagtcctggtggat
gaaggaatcattgttcatgtgaagcaggagttaaacttccatgacaaagacacccaattt
taccgcttcctggatttggagttcggactgaaccacatgaccaatgagaaggaccaatta
gacgatgagctgcaggagggtttgtcgttattactgcagattggtccagatgctcttttg
accatgattttacgtaaatgccccagccagcgtagtgcggaggacatggaggtgatctat
gaggagctgcttcatgtcaaggctgctgctcacctctccacctcagtccgtaaggagttg
gcagcagtgctgatgtttgagtcccatgccaaagcaggcacagtcttgttcagtcaggga
gacaaaggcacttcctggtacatcatctggaagggctctgtcaatgtcatcacacatgga
aagggcctggtgacgacgttacatgagggagaagactttgggcagctggccctggtgaac
gatgctcccagagcagccaccatcatcctgagagaggacaactgccacttcctacgagtc
gacaaacaggacttcatacgcatcctcaaggatgtggaagcgaacaccatgcgtctggag
gaacatggtaaagctgtgctggtgctggagaaggctgagtcaaccaatcctggaggggca
ggaaacagcagcaagtatacagtgatggctggaactccagagaagatcctagaacacctg
cttgagacagtgaagctggatactaatggcagtgatgctatagatccctgtgtgagcgac
ttcctgctaacccacagggtcttcatgccctccagccagctttgcccggccctgcaacac
cactaccatgctgagccttctgagggctcagatctggagaaggcagcctatgccctcaac
accaagcagaagatagtgaagttgatttgccagtgggtggcgctgttcggccagctgctc
aaagatgaccccatcgctgtagacttcctggagacgctgggggaggaggtggcaggtgac
tcccgtctgtccagtatgctgagggagcagctcagagacaggaggagaacgagaatgctt
gagaatgaactcgggtcactgacaaggcttaaccatcagtttgactggttttccagttgt
gaggagccagtggggaagtgtctgccaatcagatcaaaggacaaagtattgtatgagatc
ttccggccagaccatacgtcaatcactctgatgctgccggtgaacacctctgttcaggaa
atgatgtcatcgctggtaaatccaggaggagaccacgtcctggtcaaaatgaactccatg
ggagacagggctcagctgaagctggacgccacagcagtctacacctccctggggctgaat
gagagactgttcctctgcactgccacccaggtggaacaactgatgcccctgaaggagcag
cagggccctgatcagagcaccattgacactttggagcagatgtgttccaaggacatcgcc
agccagctcaccaactacgactgggaactgtttaccgccatgcatgaggtggaactagtg
tactatatatttgggcgacataaattccaaggcgccaccacagctaacctggagcgtttt
gtgcatcgcttcaacgaggtgcagtactgggtggtgacggaggtgtgtctgtgtgctgac
ctgatgaagagagccatgctgctgaagaagttcatcaagatggccgccatgttgaaggag
cagaaaaacctcaattcattctttgctgtgatgtttggtctaagcaacagtgctgtacag
agactttacaagacctgggagagagtgccgagtaagacgaaaagggtctattgtgcctac
gagaggttaatggatccatcacgtaatcacagagcctacagactggctgtggcaaagctc
agtcctccctacatccccttcatgcccctgctactaaaagacatgacattcatccacgag
ggaaacaagaactacactgaaaaactggtcaattttgagaaaatgcgcatgattgccaag
acagtgaagatcgttcgagggtgcagaagcacgccttacgtgccttcctcgcctcagaag
gggctcgcagacagaatgtttctggaggcgccttccattcgggtgtccacgtattcggag
cagtccctccctctccggaatcccagcaacatccgccactatgttcagaactttgaagtg
atcgacaaccagcgcaaactgacacaactgtccaggggaatggagcgctga
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