Oncorhynchus tshawytscha (Chinook salmon): 112221793
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Entry
112221793 CDS
T05605
Symbol
cd40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 isoform X1
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04514
Cell adhesion molecule (CAM) interaction
otw04620
Toll-like receptor signaling pathway
otw04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112221793 (cd40)
04514 Cell adhesion molecule (CAM) interaction
112221793 (cd40)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112221793 (cd40)
04672 Intestinal immune network for IgA production
112221793 (cd40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
otw04050
]
112221793 (cd40)
04090 CD molecules [BR:
otw04090
]
112221793 (cd40)
Cytokine receptors [BR:
otw04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
112221793 (cd40)
CD molecules [BR:
otw04090
]
Proteins
112221793 (cd40)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
112221793
NCBI-ProteinID:
XP_024239889
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All DBs
Position
LG22:11517222..11532238
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AA seq
329 aa
AA seq
DB search
MRGVAKILGCFITTRIEMIVLLLCILSVLTVVYSCDPETQYMKNGVCCSMCGPGTKMLSS
HSGCLDPHCMPCQEGEYQHAFTDKNLCKLQPYCDPNKNFEHSTNRNTTSLSPCKCKPGYH
CSSEECLTCVPHTKCRPGEEVKSKGNPIHDTVCKACPLNMFSSDSSAESKCKLWTVCTSE
FKTEAKGTATSDTVCVPVPNSYGTIITIVMAFLAAVVLGVVLCKFRGQLGEACKKANESC
MDLNLKRGTKRATADGRAEEGNAGPEEGREQLQPIIPFGEPPSTPYPSLPGPQIPEEVEA
KDMSENGQLVVQEEGKSPPFSVSDTQCIL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagttgcaaaaatacttggttgttttattacgacaaggatcgaaatgatcgtt
ctgcttttatgtattctctcggttttgaccgtggtttactcatgtgatccagaaacacag
tacatgaagaatggggtgtgttgcagtatgtgtgggccaggcaccaagatgttatccagc
catagcggttgtttagatccacattgtatgccatgccaagagggtgaataccagcatgca
ttcacagacaagaacctctgtaaactgcaaccatactgcgacccaaataaaaactttgag
cacagtaccaataggaacactacaagcctcagcccatgcaaatgtaagcctggataccac
tgttccagtgaagagtgcctgacatgtgttccacatactaaatgcagacctggagaagag
gtcaaatccaaaggtaaccccatacatgacacggtgtgtaaggcctgtcctttaaacatg
ttctccagtgacagctctgccgagagcaagtgcaagctgtggacagtttgtacgtctgaa
ttcaaaactgaagccaaagggacagccacctcagacacggtctgtgtgccagtacccaat
tcctatggaacaataatcacaattgtaatggcctttctagctgcagtggttttgggtgtt
gtcctgtgcaaatttagaggtcaactcggagaggcctgcaagaaagcaaatgaatcctgt
atggacttgaatcttaagaggggaactaagagggctacagcagatggaagagcagaagag
ggaaacgcaggacctgaagaggggagggaacaacttcaacctataatcccatttggagag
ccaccatcaacaccatacccatcattgccaggtcctcaaataccagaggaggttgaagct
aaagacatgtctgaaaatggacaattggtggtgcaggaggagggtaaatctccccctttt
tctgtttctgatacacagtgtattttatga
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