Oncorhynchus tshawytscha (Chinook salmon): 112221988
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Entry
112221988 CDS
T05605
Name
(RefSeq) vitamin D3 receptor A isoform X2
KO
K08539
vitamin D3 receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112221988
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112221988
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112221988
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112221988
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112221988
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
112221988
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
112221988
NCBI-ProteinID:
XP_024240257
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Position
LG22:18333998..18431690
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AA seq
426 aa
AA seq
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MELMEPMALSTSVVGPDEFNRNMPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKAS
FTCPFNGSCSITKDNRRHCQACRLKCCVDMGMMKEFILTDEEVQRKKDLIQKRKEEEAAR
EALRPRLNDEQSQVIASLVEAHHKTYDDSYSDFTRFRPPVRDGPVTRSASRAASLHSLSD
ASSDSFNHSPESVDTKLMKFSSLLMMYQDSAGSPDSGEDDGSKLSMLPHLADLVSYSIQK
VIGFAKMIPGFRGLTAEDQIALLKSSAIEIIMLRSNQSFNMEDMSWSCGGSPDFKYCITD
VTKAGHTLDLLEPLVKFQVGLKKLQLHEEEHVLLMAICLLSPDRPGVQDHAKIEDLQYSL
SEVLQAYIRVNHPGGRLLYARMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEV
FGSEVS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaattgatggagcccatggctttgagcacctcagtggtcgggccggatgagttcaac
cgcaacatgccgcgcatctgtggtgtctgcggcgacaaggccaccggcttccacttcaac
gccatgacctgcgagggctgcaagggcttcttcagacgcagcatgaagcgtaaggccagt
ttcacctgccccttcaacggcagctgctccatcaccaaggacaaccggcgccactgccag
gcctgccggctcaaatgctgcgtggacatgggtatgatgaaggagttcatcctgacagat
gaggaggtgcagaggaagaaggatctgatccagaagaggaaggaggaggaggcggcgcgg
gaggccctgagaccaaggctgaatgacgagcagagccaggtcatcgcatcattggtggag
gcacaccacaagacctacgatgactcctactccgacttcacacgcttcaggcccccggtg
cgagacggtccagtaacacgcagtgccagtcgtgcagcctcccttcactcgctgtcagat
gcctcctcagactccttcaaccactcaccagagtcggtggacaccaagctgatgaaattc
agcagtctgttgatgatgtaccaggacagtgcaggcagcccggactccggtgaggacgat
ggctccaagctctccatgttaccccacctggctgacctggtcagttacagcatccagaag
gtcattggcttcgctaagatgatccctggcttcagagggctgactgctgaagaccagatc
gccctgctcaagtcaagtgccatcgagatcattatgctacgctccaaccagtctttcaac
atggaggatatgtcctggagctgtggtggtagccctgactttaagtactgcatcaccgac
gtcaccaaggcgggtcacactctggacctgttggagccgctagtgaagttccaggtgggc
ctgaagaaactccagctccatgaggaggaacacgtgctgctcatggccatctgcctgctg
tctccagatcgtccaggggtgcaggaccacgctaagatcgaggatctccaatacagtctg
tcggaggtgctccaggcctacatcagggtgaaccacccgggaggacggctgctctacgcc
agaatgatccagaagctggccgacctgcgcagcctcaacgaggagcactccaaacagtac
cgctcgctgtccttccagcccgagcacagcatgcagctcaccccgctggtgctggaggta
tttgggagcgaggtgtcctag
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