KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112221988
Entry
112221988         CDS       T05605                                 
Name
(RefSeq) vitamin D3 receptor A isoform X2
  KO
K08539  vitamin D3 receptor
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:otw01009]
    112221988
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112221988
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:otw03310]
    112221988
Protein phosphatases and associated proteins [BR:otw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112221988
Transcription factors [BR:otw03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    112221988
Nuclear receptors [BR:otw03310]
 1. Thyroid hormone like
  1I. Vitamin D3 like receptor
   112221988
SSDB
Motif
Pfam: zf-C4 Hormone_recep PCF11_charged
Other DBs
NCBI-GeneID: 112221988
NCBI-ProteinID: XP_024240257
LinkDB
Position
LG22:18333998..18431690
AA seq 426 aa
MELMEPMALSTSVVGPDEFNRNMPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKAS
FTCPFNGSCSITKDNRRHCQACRLKCCVDMGMMKEFILTDEEVQRKKDLIQKRKEEEAAR
EALRPRLNDEQSQVIASLVEAHHKTYDDSYSDFTRFRPPVRDGPVTRSASRAASLHSLSD
ASSDSFNHSPESVDTKLMKFSSLLMMYQDSAGSPDSGEDDGSKLSMLPHLADLVSYSIQK
VIGFAKMIPGFRGLTAEDQIALLKSSAIEIIMLRSNQSFNMEDMSWSCGGSPDFKYCITD
VTKAGHTLDLLEPLVKFQVGLKKLQLHEEEHVLLMAICLLSPDRPGVQDHAKIEDLQYSL
SEVLQAYIRVNHPGGRLLYARMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEV
FGSEVS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggaattgatggagcccatggctttgagcacctcagtggtcgggccggatgagttcaac
cgcaacatgccgcgcatctgtggtgtctgcggcgacaaggccaccggcttccacttcaac
gccatgacctgcgagggctgcaagggcttcttcagacgcagcatgaagcgtaaggccagt
ttcacctgccccttcaacggcagctgctccatcaccaaggacaaccggcgccactgccag
gcctgccggctcaaatgctgcgtggacatgggtatgatgaaggagttcatcctgacagat
gaggaggtgcagaggaagaaggatctgatccagaagaggaaggaggaggaggcggcgcgg
gaggccctgagaccaaggctgaatgacgagcagagccaggtcatcgcatcattggtggag
gcacaccacaagacctacgatgactcctactccgacttcacacgcttcaggcccccggtg
cgagacggtccagtaacacgcagtgccagtcgtgcagcctcccttcactcgctgtcagat
gcctcctcagactccttcaaccactcaccagagtcggtggacaccaagctgatgaaattc
agcagtctgttgatgatgtaccaggacagtgcaggcagcccggactccggtgaggacgat
ggctccaagctctccatgttaccccacctggctgacctggtcagttacagcatccagaag
gtcattggcttcgctaagatgatccctggcttcagagggctgactgctgaagaccagatc
gccctgctcaagtcaagtgccatcgagatcattatgctacgctccaaccagtctttcaac
atggaggatatgtcctggagctgtggtggtagccctgactttaagtactgcatcaccgac
gtcaccaaggcgggtcacactctggacctgttggagccgctagtgaagttccaggtgggc
ctgaagaaactccagctccatgaggaggaacacgtgctgctcatggccatctgcctgctg
tctccagatcgtccaggggtgcaggaccacgctaagatcgaggatctccaatacagtctg
tcggaggtgctccaggcctacatcagggtgaaccacccgggaggacggctgctctacgcc
agaatgatccagaagctggccgacctgcgcagcctcaacgaggagcactccaaacagtac
cgctcgctgtccttccagcccgagcacagcatgcagctcaccccgctggtgctggaggta
tttgggagcgaggtgtcctag

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