Oncorhynchus tshawytscha (Chinook salmon): 112222012
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Entry
112222012 CDS
T05605
Symbol
plekhm2
Name
(RefSeq) pleckstrin homology domain-containing family M member 2 isoform X1
KO
K15348
pleckstrin homology domain-containing family M member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112222012 (plekhm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222012 (plekhm2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112222012 (plekhm2)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Arf GTPases and associated proteins
Other Arf associated proteins
112222012 (plekhm2)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
112222012 (plekhm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
PH
Myosin_TH1
PH_9
Motif
Other DBs
NCBI-GeneID:
112222012
NCBI-ProteinID:
XP_024240305
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All DBs
Position
LG22:complement(20503869..20523554)
Genome browser
AA seq
1040 aa
AA seq
DB search
MDQLKVKDRILENINLSVKKLQSYFAACEDETPAIRNHDRVLQRLCEHLDHALLYGLQDI
SSGYWVLVLHFTRREAVRQIDELQHIATNLGRSRAWLYLALSESSLESYLRLFQENQGLL
QKYYFKNALVCSHDHLTLFLTLVSGLEFIRFDLELDVPYLDVAPYMPEYYKPHNLLDFEE
RLPSSDSLSLHSFTSTNLEWDDSAIAPSSEDYDFGDIFPVLQPSADWEEGDLTDPVSCPR
SNASDPQTVFSDSVILRAAAAVITVRGTPPPPPRSPTFRHNPFNEYSDTNTSADITPVHT
ASCHHDTRDNMESISNELEVIRMARRRKPSKKRCSVKSSTVSGDQNNVAFEQAEADDRAP
AGCEGPEGDTWSPSVGLPQGSGVAETARRSSRRETGEEEESEGLLRLPEMTDTSMDSVGQ
PLRDVMDRLNGALDGEKTWGRPAGEEEEEEEGAKTQQSSLPRRPSSTSLEANPQPPGQQP
FRGDSMGEPPDPEARHPPLLRPALAPSPNFLQAPPAPADFYCFTPHSPDAAALRSGHHDT
AGHGQSQALLGGHEVEAEAPPGQNPSLEEEEHDEAVMVENGLAAGETEEETEEDRLSPTE
NSHPAEFKVDNNHLLLLMIHVFRENEEQLFKMVRMSTGHMEGDLQPLYLLLTDCYIYLLR
KGAAEKPYTVEDAISYNELDFVSVGLDQQTFLLVCTNRRRQFLLDTADSSLTVCFLAALT
SAMIKGCREPPYPSVLTDATMEKLALTKFVSQESHCEVSQVIIRLYSLIHWEDPMDVTLA
TQTALVGAGDSSSTKEGPLLYRACTTYLGKELWKSCYLVLSKGVLYQYTEKTDATPLMSI
TMGGGYCGGCRRSNSTEQPHAFQVILTERPPLELSADNEGDMADWMLVLCQSVSKGVIPQ
GVAPTLCIPCCLVVTDRKLLTCHQDCQTSFFRSLGGADLSDVTAVSLEDDKEYCVVEFAV
DRAQFLPPWVLYFSGCEERDRLLEALENAWRDIFQVCLPRRRVSEPSVQKHCGEALALMR
SAWQRSDSLARGRAQREPWC
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacttaaagtcaaggaccgaatattggaaaacattaatttgtctgtcaagaag
ttgcagagttactttgctgcctgtgaagatgaaaccccagccattcggaatcacgaccgg
gttctacagcggctgtgtgagcacctcgaccatgcactgctctatgggctgcaggatatc
tcctcaggttattgggtcctggttctacacttcacccgcagggaagcggtccggcagata
gacgagctccagcacatagcaaccaaccttgggcgaagtcgtgcctggttatacctagca
ctgagtgagagctccttagaaagctacctccgtctcttccaagagaaccaaggattgctg
cagaagtattacttcaaaaatgcattggtatgcagccatgatcacctcacgctctttctc
actttggtgtcgggactggagttcattcgctttgatctggagttggatgtcccctacttg
gacgtggccccctacatgccggagtactacaagccccataaccttctggactttgaggag
cgtctcccaagctcggacagcctgtccctgcactctttcacctccaccaacctggaatgg
gatgacagcgccatcgccccgtccagtgaagattatgatttcggtgacatcttccccgtg
ttgcagccaagtgcagactgggaagagggtgacctcactgacccagtcagctgtcctcgc
tcaaatgcctcagaccctcagacggtcttcagtgattctgtgattctccgggcagccgct
gccgtcatcacagtgaggggaacgccgccgccaccgccccgcagccccaccttcagacac
aaccccttcaacgagtactcagacaccaacacctcggctgacattacacccgtccacaca
gccagctgccaccacgacaccagggacaacatggagagcatcagcaacgagctagaggtt
atcaggatggccagacgaaggaagccatccaagaagcgctgtagcgtgaaaagctccaca
gtgagcggtgaccagaacaatgtggccttcgagcaggcggaggcagacgatagagccccg
gctggatgtgagggaccagaaggagacacctggagcccctctgtggggttgccgcagggc
tcaggggtagcagagacggcgaggaggagcagcaggagggagacaggggaggaggaagag
tcagagggcctcctgcggctgccagagatgacagacacctccatggacagcgttggccag
cccctacgtgacgtcatggaccggctcaacggtgctctggatggggagaagacctggggg
cgaccagctggagaggaagaagaagaagaggagggggcaaaaacccagcagagttccctc
cccagaaggccctcctccaccagccttgaagccaacccgcagcccccggggcagcagccc
tttcgaggggattcgatgggtgagccgcctgacccagaagccaggcacccccccctgctg
cgccctgctctggccccgagtcccaacttcctgcaggcccccccggctcctgcagacttt
tactgctttaccccccacagtccagatgctgctgccctgcgtagtggccaccatgacact
gcagggcatggccagtcacaggctcttcttggtggccatgaagttgaggcagaggcaccg
ccaggacagaacccctccctagaggaggaagagcatgatgaggcagtaatggttgagaat
ggattggctgctggagaaactgaagaggagactgaagaggacaggctcagtccaacggaa
aactctcatcctgcagaattcaaggtggacaacaatcacctgctgctgctcatgatccac
gtcttcagagagaatgaggagcagctcttcaagatggtgaggatgagcacgggtcacatg
gagggggacttgcagcctctctacctgctgctgactgactgttacatctacctgctgagg
aaaggtgcagcggaaaagccctacacagtagaggatgccatctcttacaatgagttggac
tttgtctctgtgggcttggaccagcagacattcctgctggtgtgcaccaacagaagacgg
cagttcctcctggacacggctgactcatcgcttactgtctgttttttggcagccctgaca
tcggccatgataaaggggtgcagggagcccccctacccctctgtgctgaccgacgccacc
atggagaaactggccctcaccaagtttgtctcccaggagtcccactgtgaggtatctcaa
gtgatcattcgcctgtattctttgattcactgggaggaccccatggatgtgactctggcc
acccagacagccctggtgggcgctggggactcgtccagcactaaagagggccccctactc
tacagagcatgcaccacctacctgggcaaggagctgtggaagagctgttacctcgtactg
agcaaaggggttctctaccagtatacagagaagactgatgcgacaccactaatgtccatc
actatggggggtgggtactgcggaggttgccggcgctccaacagcacagagcagcctcat
gccttccaggtgatcctgacagagcggcctcctctggagctgagcgccgacaatgaggga
gacatggccgactggatgctggtgctctgccagtctgtctccaaaggggtgatcccccag
ggcgtggcccccacactgtgtattccttgttgcctggtggtgacagacaggaagctgctg
acatgccaccaggactgccagactagcttcttccgctcgctgggcggcgctgatctctct
gatgtcactgctgtcagtctggaggacgacaaagaatactgtgttgttgagtttgcagtg
gacagggctcagttcctgcctccctgggtgttgtacttcagcggatgtgaggagagagac
cgcctgctggaggcgctagagaatgcctggagagacattttccaggtgtgtctgcctcgt
aggagggtgtcagagccgtcggtgcagaagcattgtggtgaggccttggctctgatgagg
agtgcctggcagagaagtgacagccttgcccggggacgtgcccagagagagccctggtgc
tga
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