Oncorhynchus tshawytscha (Chinook salmon): 112223638
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Entry
112223638 CDS
T05605
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112223638
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112223638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112223638
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112223638
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Others
112223638
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
112223638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
112223638
NCBI-ProteinID:
XP_024242498
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All DBs
Position
LG24:14747513..14761860
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AA seq
1067 aa
AA seq
DB search
MLATQTPDTGPEAKDVKQWIKEKLAWSLKALQKRYVTTDVVVTSEDGDANLLCCALEAIF
IHGIKSKYVRSEVGGRGRKGGSRGALPQPVFWSLLKTVTHGDVITELEKLSFVGTDTGRC
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPSALLLDPEEREVLLSYIQGLASLTFNL
SYKSAVLNEWTTTPLALAGLCPAAQAEALDLPFLTKRKESYDTVSQSSGGSDTVEVQRGG
PGVLGKGIGGVSGFKTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKEPWPCDL
EISNMENNGNAKKPLKDVLADFRESAHSSQDSMREDSYVSTPGADHLSENTAFSGSDSET
QGHVTHLTGPSNPASLGSDQEEPSTKTHAPTNVYSHIEGPSSLSDCVESTSTTPHLPATE
TPQEKKTEYSVKSASEPSAHMNLHRTTSMLSRTVSTDSVTHSHSWISEDDIYKPHLEELA
DTDESLLGSGPVCVNGFTSPPLEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGTV
GMWRDYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDACVTSAEGRFDLAFPGKRLLMRA
ANCDEAEDWVDRITEAVNKCRPLHLLDDQWEVLQLSDSSVTPDEPPKSSPSSPSSVPASP
DRGGAVVEQEQQQQLELDWTRPTDPESDAIKEAVLYFCQDSEARIWTPVVFSLSLETLKG
FRMQDGQKVLRCSHPIEGIRDVVPDVSMGGPAFFRVVTARDTLKLRAKSSEEARAWRGLI
RGALDSYLESGEDWEPESPGVAPGAGGNTHRLVQHRLKGDGVLLAHLCTVPTEKGLDLQG
FKCAGCPKVIGVSRGKARLCEFSGQYYCDACHQGDTIVIPSRMVHNWDLAPREVSRHALK
LLAQIEHEPLLNLDLLNPDLWEHAEAMAQAQSLRQRLRLLGDYLLTCRSGACKNIQTRLG
PRTYLLESSHLYSVMDLRQIAEGMYVAYLNTLIQFASNHVHHCDLCTQRGFICQICHTSD
IIFPFQFDTTTRCKECKAVSHITCKAKSPSCPRCLRLQRYLERDMQD
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacacagaccccagatacagggccagaggcaaaagacgtcaagcagtggatt
aaggagaagttggcgtggtcactcaaggcgttgcagaagcgctacgtgacaaccgatgtc
gtggttaccagcgaggatggtgacgccaatctgctgtgctgcgcactggaggccatcttt
atccacggcatcaaaagcaaatatgttcgctccgaggttgggggacgcggcaggaaaggg
gggtcccggggagccctcccccagcctgtgttctggagcctcctcaagactgtcactcac
ggtgacgtgatcacggagctggagaagctgagcttcgtgggtacggacacgggtcgctgc
cgggcctggctgcggctggccctcaaccacggcctaatggagtgctacctggcctccctg
ttccgtgagggctccaaactgcaggcccactaccagccctccgccctgcttctggaccct
gaggagcgtgaggtgctgctcagttacatccagggcctggcctccctcaccttcaacctc
tcttacaaatcggccgtgctcaacgagtggaccaccacccctctggctctggctggcctc
tgccctgccgcccaggctgaagcgctcgacctcccctttctcaccaagcgcaaggaatcc
tatgatacggtgtcacagtcgtccggcgggtcggatacggttgaagtgcagcgtgggggg
ccaggggtgctggggaaggggattgggggggtctcagggtttaagaccccactgaattcg
tccaatttgagcctggacaccacagggtcgtctcagctctcctccagtctgagctctgac
agtctgcttcaaggccacgaccccaagagcccagacaaggagccctggccatgtgacctg
gaaatctccaacatggagaacaatggcaatgccaagaagcctctcaaagatgttctggca
gacttcagggagagtgcccattccagtcaggactccatgcgcgaggattcatacgtgtcc
accccaggcgcagaccacctctctgagaacactgccttcagtggctccgacagcgagacc
cagggacatgtcacacatctcactggcccctctaaccctgcttcactggggtcagaccag
gaggagccgtccaccaagacccacgcccccaccaacgtgtactcgcacattgaagggccc
tccagtctcagtgactgtgtggagagcacatcgacaactcctcacctgcctgccactgag
acgccacaggagaaaaaaacagaatattctgttaagagcgcctcggagccttcagcccac
atgaacctacaccgcactaccagcatgctcagtcggacggtgtctacagactcagtcaca
cattcccactcctggatctctgaggatgacatctataagccacaccttgaggaactggct
gacaccgatgagtctttgctagggtctggcccagtttgtgtgaacggatttacctctccc
cctctagagcccgagaccccccagtcaccccccagcgtggtccaccgcaggcagataggc
ctctccaaccctttccgcggactactgaagctgggacacctggagcggcggggcacggta
ggcatgtggcgcgactactactgcgagctctcgcccttcgagttccgcctctacctgaat
gcagaggagcgcacctgctgcgacaattgctccctgctgcgttgcgaggatgcctgcgtc
acctcggccgagggccgcttcgaccttgccttccccgggaaaaggctccttatgcgggcg
gccaactgcgatgaggccgaggactgggtggaccgcatcactgaagccgtcaacaagtgc
cgcccgcttcacctcctcgatgaccagtgggaggtgctgcagctctctgacagcagtgta
accccggatgagcccccaaaatcttccccttcatccccctcctctgtacccgccagtccc
gatcgagggggggctgtggttgagcaggagcagcagcagcagctggagctggactggacg
cgtcccacagacccagagtcagacgccattaaggaagcggtgctgtacttctgccaggac
tccgaggctcgcatctggactcctgtcgtcttctccctctccttagagactctcaagggc
ttccggatgcaagacgggcagaaggtgctgcgctgctcccaccccatcgaggggatccgg
gatgtggtcccagacgtttctatgggtggaccagccttctttagggttgtaacggccagg
gatacgctcaagctgagggccaagagctctgaggaggcacgggcctggaggggcctcatc
aggggagccctggactcctacctagagagtggagaagactgggagcctgagagccccggg
gtggcccctggggcgggagggaacacccacagactggtgcagcatagactgaagggggac
ggggtgctgctggcccatctatgcacagtgcccacagagaaggggctggaccttcagggc
ttcaagtgtgcaggttgtccaaaggtgataggtgtctcccgagggaaagccagactgtgt
gagttttcagggcagtactactgcgacgcttgtcaccagggcgacaccatcgtcataccc
tcccgcatggtgcacaactgggacctcgcacctcgggaggtctccaggcatgcccttaag
ctgctggctcagattgaacatgagcccctgctcaaccttgaccttttgaaccctgacctg
tgggagcatgccgaggccatggcccaggcacagagcctcagacagaggctgcgtctccta
ggagactacctgctcacctgccgcagcggagcatgcaagaacatccagaccagactgggt
ccaaggacatacttattggaatcaagccatctctacagtgtcatggacttacgacagata
gcggagggaatgtatgtggcctacctgaacactttgatccagtttgcctccaaccacgtc
caccactgtgacctttgcacccagaggggcttcatctgccagatctgtcacaccagtgac
atcatcttccccttccagtttgacaccaccaccaggtgtaaagagtgtaaggccgtgtct
catataacctgcaaggccaagtcgccttcctgtccacgatgcctgcgtcttcagaggtac
ctcgagagagatatgcaggactaa
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