Oncorhynchus tshawytscha (Chinook salmon): 112223792
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Entry
112223792 CDS
T05605
Symbol
pus3
Name
(RefSeq) tRNA pseudouridine(38/39) synthase isoform X1
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112223792 (pus3)
Enzymes [BR:
otw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
112223792 (pus3)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112223792 (pus3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF1192
Motif
Other DBs
NCBI-GeneID:
112223792
NCBI-ProteinID:
XP_024242768
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All DBs
Position
LG24:complement(7197555..7203359)
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AA seq
504 aa
AA seq
DB search
MITLLIKATRQSKASKLTFCSRQLYKLFCRLQSNMSEELLQRVRDLEGEVGRLKAQLREK
VKEGTGGEMAVSTNSDGKKDTSKPDAGGRKKGKRGSRDRPFDFSAHPRRHVALRLAYLGW
AYQGFAVQENTDSTVEARLFEALLKTRLIQDRQSSNYHRCGRTDKGVSAFSQVMSIDLRS
TQFCGGLGVTLPSNVDADVKNEVDVAELPYVKMLNRVLPQDIRILDWSPAPQGFSARFDC
QSRTYRYYFPRGALDVTLMAEAAKRYEGTHDFRNLCKMDVGNGVLQFQRTILSATVQPVH
KTPPPAPTTADPYDLYIFEIKGLAFLYHQVRCIMAVLLLIGQKLEPPEIVDQLLDVKTNP
RKPQYSMAVDFPLVLFDCHFEGLSWRREAEEVEHALATLQHHWTQTAVKTQVIHGMIQGL
DSTGGTSSPHCWLMEGTKQRTYRPLLERPRCESLESRIEHFVKRGRLEREEGENGGETVH
KGKRPKHSHHTSISSVLPDVSPSF
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgataaccttactcatcaaagctacacgtcaaagtaaagctagcaagctgaccttctgc
agcagacaattgtataagttattttgccgtttgcaaagcaacatgtctgaggaattacta
cagagagtgagagacctggaaggagaggtggggagactgaaagcacagctaagagagaag
gtcaaagaaggaactgggggtgagatggcggtgtcaaccaactctgatggaaagaaggat
accagcaagcctgatgctggtggcaggaaaaagggcaaaagagggagtcgggaccgaccg
tttgatttctctgcccatcctcggcgccatgttgcgctccgcttagcctacctgggctgg
gcctatcagggctttgctgtccaggagaacacagacagcactgtggaagcccggctcttc
gaggctcttctaaagactcgactgatccaggatcgccagagttctaactatcaccgttgt
ggccgcactgacaaaggagtcagtgccttttcccaggtcatgtcgatagacttgcgctcc
actcagttttgtggaggcctaggagtgactctcccatccaatgtcgacgctgatgtcaag
aacgaagtggacgtggcggagctaccttatgtgaagatgctgaacagagtcctgccccag
gacatcaggattctcgactggtcacctgctccgcagggcttcagtgcacgcttcgactgt
cagtctagaacctaccggtactacttcccacgcggggctctggatgtaacgttgatggca
gaggctgccaaacgctacgagggcactcacgacttccgcaacctctgcaagatggacgtg
ggcaatggagtgctgcagttccagaggacaatcctgtctgccacggtccagcctgtccat
aaaactccccctcctgcgcccactaccgcagacccgtacgacctctacatatttgagatc
aaaggactggccttcctctatcaccaggtgcggtgcataatggcagtgctgctgctgatt
ggccagaagctggagcccccagagatagtggatcaactcctggatgtgaagacgaatccc
aggaaaccccaatacagcatggcggtggactttcccctggtgctgttcgactgccatttt
gaggggttgagttggcgcagggaggctgaggaggtggaacatgccctggccacgctgcag
caccactggacacagacagcagtcaagacccaggtcattcacggcatgatccaaggccta
gacagcacaggtgggacctcctctccccattgctggctgatggaaggtaccaaacagcgg
acctatcggcccttgcttgagcgtccacgctgcgagagcctggagtccaggatagaacac
tttgttaaaagaggcaggcttgaacgagaagaaggggaaaatggtggcgaaacggtacac
aagggcaaaaggccaaagcactcgcaccatacctccatttcgtctgtcctccccgacgtg
tcgccgtccttctga
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