Oncorhynchus tshawytscha (Chinook salmon): 112224091
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Entry
112224091 CDS
T05605
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112224091
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112224091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112224091
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112224091
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Others
112224091
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
112224091
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
112224091
NCBI-ProteinID:
XP_024243158
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All DBs
Position
LG25:complement(5112270..5138499)
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AA seq
1061 aa
AA seq
DB search
MLATQTPDTGPEAEDVKQWIKEKLAWSLKALQKRYVMTDAVVTSEDGDANLLCSSLEAVF
IHGIKSKYVRSKSGGHGRKGGSRGPLPQPVFWSLLKTVTHRDVITELEKLSFVGTEVGRC
RAWLRLALNHGLMECYLASLFREGSNLQAYYQPSALLLDPEEREVLLSYIQGLASLVFNL
SYKSAVLNEWTTTPLALAGLCPATQADAVDLPSLTKHKDSWDTMSLSSGGSDTVEVQHVG
AGVLGRVIGGVSGGRTPLNSSNLSLDTTGSSQLSSSLSSDPKSPDKDPWPCELEISAGLE
NDVNSKRPLKDDLADFRESATFSQNSMHEDLYVSTPGTDHLSENMASSGSDSEAQGPFTP
LTGSSNPASVGSDQEELSTKTHVPSEVYSHTEVPSSHSDCVERTAIETPVTETPQEKKTE
DSAKSTSAPSAHTNLCLTTSVHSRRMSTDSITHSHSWISEDDIYKPHLEELVDPDESLLG
SGPACVNGLTSPPPEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGAVGLWRDYYC
ELSPFEFRLYLNAEERTCCDNCSLLRCEDARVTSAEGRFDLAFPGKRLHLRAANHDEAED
WVDRIAEAVSKCRPLHLLDDHSEVLQPIDSFVILEEPPKSSPSSPSVPTSPEQGVTVVEQ
EQQPPLELDWTRPTDPESDAIKEAVLYLSQDAEARNWTPLVFSLSLETLNGFRVQDGRKV
LCCSHPIEGIRDVVPDVSLGGPAFFRVVTTGDTLKLRAKSPEEARAWRGLIRGALDSYLE
SGENGEPNSPELATGAGGNIHRLVQHRLKGGGVLLAHLYTVPTEKGLDLQGFKCAGCPKL
VGVSRGKARLCEFSGKYYCEACHQGDVIAIPSRMVHNWDLTPREVSRQALELLAQVEHEP
LLNLHLLNPNLWEHVEAMAQAHSLRQRLQLVGKYLLTCRSGPCKNIQTRLGLRTYLLESS
HLYSVMDLQQIAEGTYVAYLNMLIQFASNHVQQCDLCTQRGYICQICHASDIIFPFQFDT
TVRCKECKAMFHATCKAESSSCPRCLRLQRYLESDLQDCSV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagaccccagatacggggccagaggcggaagacgtcaagcagtggatc
aaagagaagttggcgtggtcactcaaggctctgcagaagcgctacgtgatgaccgatgcc
gtggtaaccagcgaggatggcgacgccaacctgctgtgctcttctctggaggccgtcttt
atccacggcatcaagagcaaatatgtccgctccaagtccggaggacatggcaggaaaggg
gggtcccggggacccctcccccaacctgtgttctggagccttctcaagacggtcactcac
cgtgacgtgatcacggagctggagaagctgagctttgtgggtacggaggtgggtcgctgc
cgggcttggctgcggctggccctcaaccacggcctgatggagtgctacttggcctccctg
ttccgtgagggctccaacctccaggcttactaccagccctccgccctgctcctggaccct
gaggagcgtgaggtgctgctcagttatatccagggcctggcctccctggtcttcaacctt
tcgtacaagtcagccgtgctcaatgagtggaccaccaccccactggctctggccggcctc
tgccccgccacccaggccgacgctgtcgaccttcccagtctcaccaaacacaaggattct
tgggatacgatgtcactgtcgtccggcgggtcggatacggtcgaagtgcagcatgtgggg
gcaggggtgctagggagggtgattggtggagtctcagggggtaggaccccactgaattct
tctaatttgagcctggacaccacagggtcatctcagctctcctccagcctaagctcagac
cccaagagcccagacaaggatccctggccatgtgaactggagatctctgccggactggag
aacgatgtcaattccaagaggcctcttaaagatgatctggcagacttcagggagagtgcc
accttcagtcagaactccatgcacgaggatttgtacgtttccactccgggtacagaccac
ctctcagagaatatggcctccagtggctctgacagcgaggcccaggggccattcacaccc
ctcactggctcctctaaccctgcttcagtggggtcagaccaggaggagctgtccactaag
acccatgtcccttccgaagtgtactcgcacactgaagtgccctccagtcacagtgactgt
gtggagagaacagcaatagagacgcctgtcacagagacgccacaggagaaaaagacagaa
gattccgctaagagcacctcggcgccttcagcccacacaaacctatgccttactaccagt
gtgcatagcaggaggatgtctacagactcaatcacacattcccactcctggatctctgag
gatgacatctataagccacaccttgaggaactggttgaccccgatgagtcattactaggg
tctggcccagcttgtgtgaatggattgacctctccccctccagagcctgagactccccag
tctccccccagcgtggttcaccgcaggcagataggcctgtccaaccctttccgtgggctg
ctgaagctgggccatctggagcggcggggcgctgtgggcttgtggcgggactactactgc
gaactctcgcccttcgagttccgcctgtacctgaacgcagaggagcgcacctgctgtgac
aactgctccctgctgcgttgcgaagacgcccgcgtcacctcggccgagggccgcttcgac
ctggccttcccagggaagaggctccacctgcgggcagccaaccacgacgaggcagaggac
tgggtggaccgcatcgcagaggccgtcagcaagtgtcgcccgttgcacctccttgacgac
cattccgaggtgctgcagcccattgacagctttgtcatcctggaagagccccccaaatct
tccccttcgtccccctccgtacccaccagccctgagcaaggggttactgtggttgagcag
gagcagcagccgccacttgagctagactggacgcgtcccacagaccctgagtcagacgcc
attaaggaggcggtgctgtacctatcccaggacgcagaggctcgcaactggactcctctg
gtcttctccctctccttggagactctcaacggcttccgggtacaggatgggcgaaaggtg
ctgtgctgctcccaccccatcgaggggatacgggacgtggtcccagatgtttctctgggg
ggaccggccttctttagggtcgtaacgaccggagatacgctcaagctgagggccaagagc
cctgaggaggcgcgtgcctggaggggcctcatcaggggagccctggactcctacctggag
agtggagagaacggggagcctaatagccctgagttagccactggggcaggggggaacatc
cacagactggtgcagcatagactgaaggggggcggggtgctgctggcccatctatataca
gtgcccacggagaagggcctggaccttcagggcttcaagtgtgcaggttgtccaaagctg
gtgggggtctcccggggaaaagccagactgtgcgagttctcagggaagtactattgcgaa
gcttgtcaccaaggtgacgtcatcgccataccctcccgcatggtgcataactgggacctc
acgcctcgtgaggtctccagacaggccctcgaactgctggctcaggttgaacatgagccc
ctgctcaaccttcaccttttgaaccctaacctgtgggagcatgttgaggccatggcccag
gcacacagtctcagacagaggctgcagctggtaggaaagtacctgctcacctgccgcagt
gggccatgcaagaatattcagaccagactgggcctaaggacatacctgttagaatcaagc
catctctacagtgttatggacttacaacagatagcggagggaacatatgtggcctacttg
aatatgttgatccagtttgcctccaaccacgttcaacaatgtgacctttgcacccagagg
ggctacatctgccagatctgtcatgccagtgacatcattttccccttccagttcgacacc
actgtcaggtgtaaagagtgtaaggcaatgtttcacgcaacctgcaaggccgagtcgtcc
tcctgtccacgatgcctgcgtcttcagaggtacctcgagagcgatctgcaggactgctct
gtttga
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