Oncorhynchus tshawytscha (Chinook salmon): 112224552
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Entry
112224552 CDS
T05605
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3 isoform X1
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04217
Necroptosis
otw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
112224552
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112224552
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112224552
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112224552
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112224552
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C64
112224552
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
112224552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
112224552
NCBI-ProteinID:
XP_024243932
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All DBs
Position
LG25:27438877..27455289
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AA seq
814 aa
AA seq
DB search
MRLQVLRLYTLHLVNTMSQGQNFLPKFLFVSNLLKAVKIRERVPNDVVKPAASGGLMHHL
RGMHRYTLEMIRMSQFPQAFQQVIQAAILDRAMQSSLEQEKKLNWCREVKKMVPLRTNGD
GNCLLHAASQYMLGVQDTDLVLRKALFSVLKETDTGNFRARFQTELLQSQEFTQTGLRYS
TMNWEEEWEKIIKMASPVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVLRSMKSCS
SFSPLNVGGIYLPLHWPPGECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGG
FEELKVHFLMEKEQTQKERLLKDYLMLIEIPVIGLGYDTTRIINAARLDEGNLPEDMNLM
EDYLQLVNHEYKRWQEDKDQLWAAQPHRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPH
CHECFEKRQGQPNGRIEAAPTKGGGQSCEPECSSGCRAVLSSPRSVPPPPTAPSLSLYSE
THAMKCKTPGCLFTLSVEHDGLCERCFNTRQNAPTADGPSGLPLPAHLGWPQWGAGREQE
TERCNVCHQKAFRIFNGLCPPCLQRTATERGEDPQPPAAARIEASSGSLWTQPQPRDSER
SGTSALNSHTSGRPCKRSGCQFFGTQQNLGFCTICYLDYQTNHLATPHPPPAPIQSRHVS
EAGFQDASRCRGPDCGAMGKVMLEGYCNKCYVKEQSTRLNQAATRAPGTHSPPLVMRTAK
PERDRTRQTQTQTQTQATCRRSGCSNISPGCTDLCPECHTRNTRGQRESRRERAGAPKEK
TKQRCKTLGCEHYANQEKQGYCNECDLFKQIYRG
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttcaagttctgcgtttgtacacattacatctggtgaacaccatgtcccaggga
cagaatttcctgcccaagttcctctttgtgagtaacctgctgaaagcggtcaagatccgg
gagcgggtgcctaacgatgtggtgaagccagcggccagcggaggcctgatgcaccacctg
cggggaatgcaccgctacaccctggagatgatccgcatgagccagttcccccaggccttc
caacaggtcatccaggcagccatcttggacagggccatgcagagctccctagagcaggag
aagaagctcaactggtgccgcgaggtcaagaagatggtgccattgagaaccaatggagat
gggaactgtcttctccatgctgcctctcagtacatgctgggggtgcaggacacagacctg
gtcctgaggaaggccctgttcagcgtgctaaaggagacagacacgggcaacttcagagcc
cgtttccagactgagctgctgcagtctcaggagttcacccagactggcctgcgttacagc
accatgaattgggaggaggaatgggagaagatcatcaagatggcatcacctgtatccagc
agcaacgggctgcagtttgactccctggaagacatacacatctttgtcctctcaaacatc
ctccgcaggcccatcatcgtcatcgcagaccaggtgctacgtagcatgaaatcctgctcc
tccttctctcccctcaatgtggggggcatctacctgcctttacactggcctccaggggag
tgctacaaataccccatagtgctcggctacgactcccagcactttgcccccctcatcacc
atcaaagacagtggcccggagatccgagcggtgccgctgatcaacccgggtcgtgggggc
tttgaggagctcaaggtgcacttcctgatggagaaggagcagacgcagaaggagaggctg
ctgaaggactacctgatgctgattgaaatccctgtcattggactgggctatgacaccaca
cgcatcatcaacgctgccaggctggatgaagggaacctgcctgaggacatgaacctgatg
gaggactacctccagttggtcaaccacgagtacaagcgctggcaggaagacaaggaccaa
ctgtgggccgcccagccccatagaccaccccccttctccgtgtcccagctgtcccttatc
gagatccgctgtgccacaccacgatgcaccttctacgtctccgtggacacccagccacac
tgccacgagtgctttgagaaacgccagggccagcctaacgggaggatagaggccgctcct
acgaaaggcggtggtcagtcttgtgagccagagtgtagtagtggctgccgggcagtgtta
tccagcccacgctccgtccctcccccacccacggcgcccagcctcagcctgtacagcgag
acccacgccatgaagtgcaagacacccggctgccttttcaccctcagcgtggagcacgat
ggtctgtgtgaacgctgcttcaacacccggcagaatgcacccactgctgatggcccctcg
ggcctccccctgcctgcccacctcggctggccccagtggggcgcgggacgggagcaggag
acagagcggtgcaacgtgtgccaccagaaggccttcaggatatttaacggactgtgcccc
ccgtgcctccagaggactgctacggagaggggcgaggatccccagccaccggcagcagcc
aggatagaggcctcctctgggtcgttatggacccagccccagccaagggactctgagcgc
tcaggcacctcggctctcaacagccacacgtctggccggccctgtaagaggtcgggatgc
cagttcttcgggactcaacagaatcttggattctgcaccatctgttacctggactatcag
accaaccacctggcaacccctcatcctccccctgctccaatccagagtcgtcacgtgtca
gaggcaggtttccaggatgcttcgcgctgtcggggcccggactgtggggccatgggtaag
gtcatgctggagggttactgcaacaagtgctacgtaaaggagcagagcaccaggctcaac
caggctgctaccagggctcccggcacccactcccctccactggtcatgcgaacagctaaa
ccagaaagagacagaaccagacagacgcagacccagacccagacccaggcaacgtgtagg
cggagtggctgcagtaacatctcccccggctgcacagacctgtgtccagagtgccacacg
cgaaacacgcgggggcagagagagagtcgcagggagagggcaggggcacctaaagagaag
acaaagcagcgctgtaaaaccctaggctgtgagcactatgctaaccaagagaagcaaggc
tactgtaatgaatgtgacctctttaagcagatctacagggggtga
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