KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112224689
Entry
112224689         CDS       T05605                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 6A
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112224689
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     112224689
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     112224689
   Histone demethylases
    112224689
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_17 TPR_8 TPR_2 TPR_12 TPR_16 TPR_11 TPR_CcmH_CycH TPR_7 TPR_9 TPR_19 ARM_TT21_C RPN7 ANAPC3
Other DBs
NCBI-GeneID: 112224689
NCBI-ProteinID: XP_042175878
LinkDB
Position
LG03:70095306..70189383
AA seq 1473 aa
MKLCGVSLDAAAARSLGAAGDEEKKMAAGKANEIELDFLKLTAQERESLVEIDSSLFGFQ
RLHEDGARTKALLLKAVSCYDSAILKSEGKVEPEMFCQLGHFNLLLEDYPKALSAYQRYY
SLQTDYWKNAAFLYGLGLVYFHYNTFHWSVQTSSSEAQAGQRRAIQAFQDGLYIDPSFSR
ATEIHMRLGLMFKGNTNYKSSLKHFQLALIDSNPCTLSKAEIQFHIAHLYEIQKKFRTAK
EAYENLLQTENLPAQVKAATLQQLGWMHHTVERLGDPGSKDSYAIQCLQKSLEADPNSGQ
SWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAV
QLDHSHAAAWMDLGTLYESCGQPHDAIKCYINATRSKACTNTAALIHRIKLLQACKPHQG
GEGVQVQTQVSPHPSHTDSQASPAKRKRTTSPAKSGVDLWTNDPVQQQIPSWYLTPQRLQ
LLDQLRTNRTSLKPPQVQMLDQLENQFFLMQQHQQQVKQQAAGQLWPTQPNGPSLSPNSL
PSPHPLSRTSSVSHTTAHPPCTPQPMANGPLSLSHLGQLGNQEAGTMGNNHTPDLPGAGT
LPGGLTESGRSNRNVPYLQQNCLPHNCTAASDTSTPTSNNTSSTNTPTSNTTSHRSNSTS
NAEEAWKSQQHTNSPEGLHKGPGSYSAGPNGEHPSSPSHPTQAAGPGAQSLNQVGHSTGP
CPASSSSSCSSLSSFSSSPQRGGAPNYLPSSPLSSTTTTSGAQTKETTPLGSSSGLATHA
GTLRSPSPSLTALTHGLANHIQQGAVTTTYSSGSQSQPGSPPPGALSSDDPQLSALLRGK
DNNKDDENHDSNNNHHRGVNQGATTDDNIKVNNIHPGGPKPLSEHSVASSPLSAMSVTTP
SPHLSTNXPTATNLASLNSSSPNSGTTGTTTTPQVNGKGLEDSRSPVKVDPTELSHRRPA
LASWSSVSIYPSSNQVLKACRNLGKNGLSSSSILLDQCPPPRPPAPSPSLPKDKLNPSTP
SVYLENKRDAFFPPLHQFCTNPSNPVTVIRGLAGALKLDLGLFSTKTLVEANPDHLVEVR
TQLSQPTDENWDLSGTRKMWRCQSSQSHTTIAKYAQYQASSFQDSLREEKKMELEAEAAN
AESVACRKKGPFKHIKFGTNIDLSDDRKWKLHLQELSKLPAFARVVSAGNLLSHVGHTIL
GMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFSVPQPYWGIINDFCEKNNIN
FLMGSWWPNLEDLYEADVPVYRFIQRPGDLVWLNTGTVHWVQAIGWCNNIAWNVGPLTAY
QYKLAAERYEWNKLQSVKSIVPMIHLSWNMARNIKVSDSKLFQMIKYCLLRTLKQCQMLR
ELLQVSGKELVWHGRTRDEPAHYCSICEVEVFALLFVTSESNSRKTYVVHCQDCARRGSS
NLDNFVVLEQYKMDDLTQVYDQFTLAPPLPSSS
NT seq 4422 nt   +upstreamnt  +downstreamnt
atgaaattgtgcggagtgtcgctcgacgcggctgctgctcgaagtctcggcgctgctggt
gatgaggaaaagaaaatggcggcgggaaaagcgaatgaaatcgaattggactttctgaag
ctaacagcgcaggagagagagagcttggtcgaaattgacagttcactatttggatttcag
aggcttcatgaagatggcgccagaacgaaggccttgctgttaaaggctgtaagctgctat
gactctgccatcctgaagtcagaagggaaagtagagccagagatgttctgccagctgggc
cacttcaatcttctcctggaggactatccaaaagcattatctgcatatcagaggtactac
agtttacaaacggattactggaagaatgctgcctttttatatggccttggtctggtctac
ttccattacaacacatttcactggtcagtgcagacctcctcctcagaggcccaggcagga
cagagaagggcgatacaagcatttcaggatgggctctatattgaccccagtttctcccga
gccacagagatccacatgagactgggcctcatgtttaaaggcaacaccaattacaaatcc
agtctgaagcattttcagctggctttgattgactccaacccctgcactttgtccaaagct
gaaattcagttccacatcgctcatttatatgagattcagaagaaattcagaacagcaaaa
gaagcgtatgagaatttactccagacagagaatcttcctgcacaggtgaaggctgctaca
ctgcagcaactaggctggatgcatcacacagtggagcggttaggggacccaggctccaag
gacagctatgccatccagtgtctacagaagtcactagaagcagaccccaactctggacag
tcctggtacttcctcggcaggtgctactccagtattgggaaagtccaggatgccttcatc
tcctacagacagtccattgacaagtctgaggccagcgctgacacctggtgctccataggt
gttctgtaccagcagcagaaccagcctatggatgctctgcaggcgtacatctgtgcagtg
cagctggaccacagtcatgcggctgcctggatggacctgggcacgctctacgagtcctgc
gggcagccgcacgacgcaatcaagtgttacatcaacgccacgcgcagcaaggcctgcacc
aacaccgctgccctcatacaccgcattaagctgctccaggcatgtaagccccaccaggga
ggtgagggagttcaggtacagacacaggtctctccccatcccagccacactgacagtcag
gccagccctgccaagaggaaacgcaccaccagcccagctaagagtggtgtcgacttgtgg
acaaacgacccggtacaacagcagatccccagctggtacctaacgccacagagactacag
ctcctggatcagctccggaccaaccggaccagtctgaaaccaccacaggtacagatgctg
gatcagctggaaaaccagttcttcctcatgcagcagcatcaacagcaggtgaaacagcag
gcagcaggccagttgtggcccacacaacccaacggcccctcgctatccccaaactccctc
ccctcacctcaccccctctcccggacttcatctgtcagtcacaccacagcccaccctccc
tgcactcctcagccaatggccaacggacctttatctttaagtcacctgggacagctgggt
aatcaggaggcggggaccatgggcaataatcacactcccgatttaccgggtgcagggact
ttaccggggggtctaacggaaagtggcaggagtaacagaaacgtgccttacctgcagcag
aactgtctacctcacaactgcacagccgctagtgataccagtacccctaccagcaacaac
actagtagtaccaatacccccaccagcaacaccaccagtcaccgcagtaacagtaccagt
aatgcagaggaggcctggaagagccagcaacacaccaactcccctgaggggcttcacaaa
ggtccaggttcatattcggcaggtcccaatggagaacacccttcctccccctcccatccc
acccaggcagctggccctggtgctcaaagtctaaatcaggtcggacattccaccgggccc
tgccctgcctcctcttcctcctcctgttcctccctctcctccttctcctcttcgccacag
aggggcggtgcccccaactatctcccctcctctcccctctcctccaccaccactacctca
ggggcccaaaccaaagagaccacgcctttaggaagcagcagcggattggctacccatgca
gggacactgcgcagtcccagtcccagtctcactgcccttacacatggattggctaatcac
atccagcagggggcggtgaccaccacgtacagctcggggagccaatcccagcccggctct
cctcctccgggcgcgctcagttcagacgaccctcagctctcagccttgctcagaggaaag
gacaataataaggatgatgaaaaccacgatagtaataataatcatcatcgtggcgttaat
caaggagccaccacggacgataacatcaaggtcaacaacatccacccgggaggtcccaaa
cccctgtcggaacactctgtggcatcctcgcccctctcagccatgtccgtcaccaccccc
tccccccacctctccactaacncccccacagccaccaacctcgccagccttaacagcagt
tcgcccaacagcggaaccaccggtaccaccactaccccacaggtcaatggtaaggggcta
gaggactctcgcagtccagtcaaggtggatcccactgagctgtctcacagaaggccagcc
ctggcctcatggtcctcagtatccatctaccccagctcaaaccaggtgctcaaagcatgc
aggaacctggggaagaatggcctgtccagcagcagtatcctccttgatcagtgtcccccg
cccaggccccctgccccctcaccctcgctgccgaaggacaaactcaacccctccacaccc
agtgtctacctggagaataagagagatgccttcttccctccgcttcatcagttctgcacc
aacccctccaaccctgtcactgtcatcagagggctggccggggcgctcaaactggacctg
ggtctgttctctactaagaccctggtggaggctaacccagaccacctggtggaggtgcgg
actcagctgtctcagcccactgatgagaactgggacctgagcggcaccaggaagatgtgg
cgctgccagagcagccagtcacacaccaccatcgccaagtacgcccagtaccaggcgtcg
tccttccaggattcactacgggaggagaagaagatggagctggaagcagaggcagccaac
gcagagagtgtggcgtgccggaagaaagggcccttcaaacacatcaagtttggcaccaac
atcgacctgtctgacgataggaagtggaaactgcatctgcaggagctcagtaagctgcca
gcctttgccagggtggtgtctgctggaaacctgctcagccacgtaggacacaccatcctg
ggcatgaacactgtccagctttacatgaaggtccctgggagcaggacgccaggtcaccaa
gagaacaacaacttctgttcagtgaacatcaacatcggcccgggggactgtgagtggttc
tctgtgccccagccttactggggaatcatcaacgacttctgtgaaaagaacaacatcaac
ttcctgatgggttcatggtggcccaacctggaggacctgtacgaggcagatgtccctgtc
taccgcttcatccagcgccccggagacctggtgtggctcaacacgggcaccgtccactgg
gtccaggccatcggctggtgcaacaacatcgcctggaacgtaggacccctcactgcgtac
cagtataagctggcagcagagcgatatgaatggaataagctgcagagcgtcaagtccatt
gtccccatgatacacctctcctggaacatggccaggaatatcaaagtctccgacagcaag
ctcttccagatgatcaagtactgtctgctgcggacattgaagcagtgtcagatgctgcgg
gagctactgcaggtgtcaggcaaggagctggtgtggcacggcaggaccagagacgagccc
gcacattactgcagcatctgtgaggtggaggtgtttgccctactgtttgtaaccagtgag
agcaacagcaggaagacgtacgtggtgcactgtcaggactgtgcccgtagggggagctct
aacctggacaactttgtggtgctggagcagtacaagatggacgacctcacacaggtctac
gaccagttcacactcgctcctcctttgccatcatcctcttga

DBGET integrated database retrieval system