Oncorhynchus tshawytscha (Chinook salmon): 112225401
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Entry
112225401 CDS
T05605
Name
(RefSeq) cystathionine beta-synthase isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00260
Glycine, serine and threonine metabolism
otw00270
Cysteine and methionine metabolism
otw00670
One carbon pool by folate
otw01100
Metabolic pathways
otw01230
Biosynthesis of amino acids
Module
otw_M00035
Methionine degradation
otw_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
112225401
00270 Cysteine and methionine metabolism
112225401
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
112225401
Enzymes [BR:
otw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
112225401
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Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
DUF7317
Motif
Other DBs
NCBI-GeneID:
112225401
NCBI-ProteinID:
XP_024245115
UniProt:
A0A8C8F0Q0
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Position
LG26:complement(24291909..24318017)
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AA seq
625 aa
AA seq
DB search
MSSVFSSTDSVGAEPSVCPNAAKLSNAQANGVAAILKGGSKVNGEAMLNGHKLSMNGSAQ
VNEDSAGRKAQNGSVHVNGHEGENDLEKAAAGVEERQWIRPDLPSKCTWKLGGSSVESPH
CHSELTEAPSILPNILGKIGDTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLR
MVEDAERNGILKPGDTIIEPTSGNTGIGLALASAVKGYRCIIVMPEKMSMEKVDVLRALG
AEIVRTPTTARFDSPESHVGVAWRLKNEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCD
GKVDMLVAGAGTGGTITGIARKLKERCPNIKIVGVDPEGSILAEPEELNKTDKTQYEVEG
IGYDFIPTVLDRSVVDRWYKSNDDESFAMSRMLIREEGLLCGGSSGTAMAAAVRMATELK
EGQRCVVILPDSIRNYMSKFLSDNWMCDKGFLTPEDLMVSKPWWWNLSLQGLNLFSPLTV
LPSVNIKKTIKILKEKAFDQAPVVDESGVILGMVTLGNMLSSVLAGKVKASDPVAKVLYK
QFKQVRLTDNLGKLSRILETDHFALVVHEQIQYMEDGSPCLRQMVFGVVTAIDMLNYITT
RERQGSTRERTLSECSITSECSLTD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggttttctccagcacggactctgtgggcgccgagccctccgtctgccccaat
gcagccaagctcagcaacgcacaagccaacggagtggctgccattttgaaagggggatcc
aaggtcaacggagaagccatgttgaacggccacaagctctccatgaatggatcggctcaa
gtgaacgaggacagtgctggccgtaaggcccagaatgggtcggtccatgtgaacgggcat
gagggggagaacgatctagagaaggcagccgcaggcgtggaggagaggcagtggatccgt
cctgacttgcccagcaaatgcacttggaaactgggcgggtcttccgtagagtcccctcac
tgccactctgaactgactgaagctcccagcattctacccaacatcctcgggaagatcgga
gacacacctctggtccgcatgaacaagatccccaaagccttcggccttaagtgtgaactc
ttggccaagtgtgagttctttaacgcagggggcagtgtgaaggaccgtatcagtctaagg
atggtggaggatgcagagagaaatgggatcctcaaaccaggagacaccatcatcgagcct
acctctggcaacacaggtattggtctggccctggcctctgcagttaaaggctatcgctgc
atcatcgtcatgcctgagaagatgagcatggagaaggtggatgtgcttagagccttgggg
gcggagatcgtgcgtaccccaaccaccgcccgctttgattcgccggaatcccacgtgggc
gtggcctggcgtctgaagaatgagattcccaactctcatatcctggaccagtaccgtaac
cctagcaaccccctggcccactacgacaccactgccgaagagatcctggagcagtgtgat
ggtaaggtggacatgttggtggcaggagctggcaccggtggcaccatcactggcatcgcc
cgcaagctgaaggagagatgccccaacatcaagatcgtgggtgtggaccctgagggttct
atactggctgagccagaggagctgaacaaaacagataagacccagtacgaggtggagggc
atcggatacgacttcatccctactgtactagacagatctgtagttgacaggtggtataag
tccaatgacgatgagtcttttgccatgtcacgcatgctgatcagggaggaggggcttctc
tgcggaggtagttcaggtacggccatggctgcagcagttagaatggccacagagctgaag
gagggccagcgctgtgtcgtcatcctgcctgactccatccgcaactacatgtctaagttc
ctgagtgataactggatgtgtgataagggcttcctaaccccagaagacctgatggtgtcc
aaaccctggtggtggaacctgagtctgcagggtctgaacctattttcccccctcactgtg
ctgccttcagtcaacatcaagaagaccatcaagatcctcaaggagaaggccttcgaccag
gcacccgtcgttgacgagtccggcgtgatcctagggatggttacccttggcaatatgttg
tcttcagtactggctgggaaggtcaaggcctctgaccctgtcgccaaggtgctttacaaa
caattcaaacaggtgcggctgacagataacctgggtaagctgtcccgtatcttggagaca
gatcactttgccctggtggtgcatgagcagatccaatacatggaggatggctcgccctgt
cttagacagatggtattcggggtggtgaccgccattgacatgcttaattacatcaccacg
cgcgagcggcagggaagcacacgcgagcgcacgctgtcagagtgctcaataacgtcagag
tgctcgctgaccgactag
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