Oncorhynchus tshawytscha (Chinook salmon): 112226082
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Entry
112226082 CDS
T05605
Name
(RefSeq) sphingosine 1-phosphate receptor 2
KO
K04292
sphingosine 1-phosphate receptor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112226082
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112226082
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Lipid
Sphingolipid
112226082
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
112226082
NCBI-ProteinID:
XP_024246078
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Position
LG27:12358642..12392834
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AA seq
373 aa
AA seq
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MTLCRKATVLCHPVVAMKSKYSQYYNRTLIHAYYVFAKDMTWEELEERTNGKAQLSSLNI
VFVIICSIIILENLLLLIAVFRNKKFHTAMFFFIGNLAFSDLLAGSAYIANIFLSGPRTF
ELVPVQWFIREGTAFIALAASVFSLLAIAIERYIAITKVRVYGSNRTCRMFLLIGTCWVT
SILLGGLPIIGWNCINNLPECSALLPLYSKKYILFVVTIFSIILLSIGILYVRIYLIVRS
SHQEATNSPAYALLKTVTIVLGVFIVCWLPAFTVLLLDTSCRRLDCPVLSKADIFFGIAT
LNSALNPLIYTLRSKDMRKEFLRVLCCWGLLTSGRPTDRCLVPLKSSSSMEHCTNKHEHQ
TTPIMQAECTTCV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgactctttgccgaaaagccaccgtgctctgccaccctgttgttgccatgaagagcaag
tattcccagtactacaaccggaccctgatccatgcctactatgtgtttgccaaggacatg
acctgggaggagttagaggagcgcaccaacgggaaggcccagctcagctccctcaacatc
gtcttcgtcatcatctgcagcatcatcattctggagaacttgctgctgctcattgccgtg
ttccgcaacaagaagttccacaccgccatgttcttcttcatcgggaacctagccttctcc
gacctgctggccggctctgcctacatcgccaacatcttcttatcagggccgaggaccttt
gagttggtgccggtgcagtggttcatccgggagggcacagcctttatagcgctggccgcc
tccgtcttcagcctgctggccatcgccatcgagcgctacatcgccatcaccaaggtcagg
gtttacggctctaacaggacgtgtcgtatgttcctgctgatcgggacgtgctgggtcacc
tccatcctcctggggggcctgcccatcatcggctggaactgcatcaacaacctgcctgag
tgctcggccttgctgcccctctattccaagaagtacatcctgttcgtggtcaccatcttc
agcatcatcctgctctctatcggcatcctttacgtgcgcatctacctgatcgtgcgctcc
agccaccaggaggccaccaactctccggcctacgccctgctgaagacggtcaccatcgtg
ctgggcgtcttcatcgtgtgctggctgcccgccttcaccgtcctcctcctggacacctcc
tgccgcaggctggactgccccgtcctctccaaggcagatatcttcttcggcatcgccacg
ctcaactcggcactcaacccgctgatctacacgctacgcagtaaggacatgagaaaagag
ttcctgcgtgtgctgtgctgctgggggctgctgaccagcgggcgccccactgaccgatgc
ctggtgcccctcaagagctccagctctatggagcactgtaccaacaaacacgaacaccag
accacgcccatcatgcaggcagagtgcaccacctgtgtctga
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