Oncorhynchus tshawytscha (Chinook salmon): 112226864
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Entry
112226864 CDS
T05605
Name
(RefSeq) pre-B-cell leukemia transcription factor 1 isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112226864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112226864
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112226864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
LZ3wCH
UCH
DUF7260
Motif
Other DBs
NCBI-GeneID:
112226864
NCBI-ProteinID:
XP_024247264
UniProt:
A0A8C8FD31
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All DBs
Position
LG28:complement(19663866..19737662)
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AA seq
436 aa
AA seq
DB search
MDEQPRLMHSHGVGMARHPGMAQNMQDGTGGTDGDGRKQDIGDILQQIMTITDQSLDEAQ
ARKHALNCHRMKPALFNVLCDIKEKTVLSIRGTQEDDAPDAQLMRLDNMLLAEGVSGPEK
GGGSAAAAAAAAAAGGGVGQDNSTEHSDYRAKLTQIRGIYHTELEKYEQACNEFTTHVMN
LLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFN
KQATEILNEYFYSHLSNPYPSEEAKEELGKKCSITVSQVSNWFGNKRIRYKKNIGKFQEE
ANMYAAKTAVSATNVSAHGSQANSPSTPNSAGSAGSFNMSNSGDLFMSVQALNGDSYQGA
GVGANVQSQVGSSQKLVDTLRHVISQTGGYSDSLAASQMYSPQGINTNGGWQDAPTPSSV
TSPIEGPGSVHSDTSN
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagcctcggttgatgcactcccacggcgtgggaatggcccgacaccccggc
atggcgcaaaatatgcaggatggcacaggagggacggacggagatggaagaaagcaggac
attggagacatattacagcaaataatgacaatcacagaccaaagcctggacgaagcgcag
gccaggaaacatgcactgaactgtcacaggatgaaaccggctctcttcaacgtcttgtgt
gatataaaagagaaaacagtgctcagtatccgtggcacccaggaggacgatgctccagat
gcccagctcatgcgattggacaacatgctgctggcggagggcgtgtccggaccagagaaa
gggggcgggtctgcggcagcagcagcggcggcggcagcagcgggaggaggggtgggccag
gacaactcaacagaacactcagactaccgggccaagctgactcagatccgcgggatctac
cacacagagctggagaagtatgaacaggcatgtaacgagtttaccacccatgtgatgaac
ctgctgagggagcagagtcgcacacgtcccatctcacccaaagagatcgagcgcatggtg
gggatcatccaccgcaagttcagctccatccagatgcagctcaaacagagcacctgcgag
gccgtcatgatcctacgctcacgcttcctcgacgccagacgaaagagaaggaacttcaac
aagcaggcaacagagatcctaaatgaatatttctactcccacctgtccaacccctacccc
agtgaggaggccaaggaagagctgggcaagaagtgctccatcacagtgtcacaggtatcg
aactggtttggaaacaagaggatccgatacaagaaaaacattggcaagttccaagaggaa
gccaacatgtacgccgcgaagacagctgtcagtgcaaccaatgtatcagcccatggcagc
caggccaactccccctccacccccaactctgcaggttctgctggctcttttaacatgtca
aactccggagacttgttcatgagtgtgcaggctctgaatggggactcataccagggggct
ggggtaggggccaacgttcagtcccaggtaggatcctcgcagaaactagtggatactctt
cgccatgttatcagccagacaggaggatacagtgacagtctcgccgccagccagatgtac
agtccacagggcatcaacacaaatggtggatggcaggatgctccgaccccctcgtcagtg
acctcgcccatagaaggacctggaagtgttcactcggatacctccaactga
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