Oncorhynchus tshawytscha (Chinook salmon): 112227660
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Entry
112227660 CDS
T05605
Symbol
tnfrsf11a
Name
(RefSeq) uncharacterized protein tnfrsf11a
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112227660 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
otw04050
]
112227660 (tnfrsf11a)
04090 CD molecules [BR:
otw04090
]
112227660 (tnfrsf11a)
Cytokine receptors [BR:
otw04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
112227660 (tnfrsf11a)
CD molecules [BR:
otw04090
]
Proteins
112227660 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
112227660
NCBI-ProteinID:
XP_024248226
LinkDB
All DBs
Position
LG29:complement(26468098..26491406)
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AA seq
664 aa
AA seq
DB search
MRVHFSTSWIFQGWIIHLVLTLCAQRALSRPTCSQQQYLKEKRCCSRCEPGSYVFAECAG
YSDTKCRPCGSDEYQPDWTNETKCLPQKFCDTGKGFNRVRPSNRLAAVPCQCKPGFQCSP
INCEFCEKIPTCGPGYGLETDTESGRRTCVACKRGHFSPNTSMEPCSLWTNCNGLGKSDK
QTGSDQTDAVCGPHLSGASTSWVLLWVLSVITVLCLLILLLYCYKEKLRLLSVNLRSCVQ
NLKRTRIQQETLAPLYHSGVVGGGLEGQSGTLRETTCLIGLAHSPSETPHTCPTATPGDR
VKLPPTKEMEEERREEEDEGVGSEGSGEAEEVSEDGVSEDVCVSPLWAGSCVCVLSVREP
LEVGDNEDCSQAVNPGTLGTCSCGGEGESKGGEKDERKDGGRERAKVVEGLQVKSSERSS
HTSSPFSLSPTSSSLSPADHSCDLYPPLTQVRSEVKGQLIDSSQRKGEELYRLNCSISST
LTTKATPPLTSAISPYPSVTSVTVGDRQSELTSEASSSEQNQGLSWRDIGGNKLSSGGSE
LDCAPESLQSQLTEPALTSGQVTGNNNTTFISSGQVMNFNADVIVVYVSQTSLGNEGEGP
DDAFGSPVQEQANERAPMFQSSISSKSVSHSSVASSVNSITHNPLRQEDNLPVQEVTDQW
PREN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcacttctccaccagttggatatttcaaggctggatcatccatctggttctc
actctgtgtgcacagagagccctgtctagacccacctgttcccagcagcagtacctcaaa
gaaaagagatgttgcagcaggtgtgaaccagggtcctatgtgtttgcagagtgtgctggt
tactctgacacaaagtgtcgtccgtgtggcagtgatgagtaccagcctgactggaccaac
gagaccaagtgtctgcctcagaagttctgtgacacaggtaagggctttaaccgtgtgagg
cccagtaaccgcctggctgcagtaccctgtcagtgtaaacctggtttccagtgttctccc
atcaactgtgagttctgtgagaagattcctacctgtggaccaggatatggactggagact
gacacagagtcgggcaggagaacttgtgttgcgtgcaagagaggacatttctctcccaac
acctctatggaaccatgcagtctgtggaccaattgtaacggtctggggaagagtgacaag
cagactgggagcgaccagactgatgctgtatgtggaccccatctctctggtgcctctacc
tcctgggtcctactgtgggttctgtcagtcatcactgtcctttgtctcctcatcctcctg
ctctactgctacaaggaaaaacttcgactactctcagtgaatttacgatcatgtgtccag
aatttgaaaaggaccaggatacagcaggagactctggcccctctctaccacagtggcgtc
gtgggagggggactagagggtcagagtggcactctgcgtgagacaacctgtcttattggc
ctggctcacagcccctcagaaaccccacacacctgtcctacagctacacctggtgaccgg
gtcaaactgccacccaccaaagagatggaggaggagaggagggaggaggaggatgagggg
gtggggagtgaggggtcaggggaggcagaggaggtttctgaggatggtgtgtcagaggat
gtgtgtgtgtctccactgtgggctggctcctgtgtgtgtgtgttgtctgtcagggaacca
ttagaggtaggggataatgaagactgtagccaggctgtcaaccctggaaccctcgggacc
tgctcctgtggaggagagggggagagcaaggggggagagaaggatgaaaggaaagatgga
gggagggagagggccaaggtggtagagggtctgcaagtgaagagctctgagaggagcagc
catacctcctcccccttctccctctctcccacctcctcctctctctcccccgctgaccat
tcatgtgacctctacccaccgctgacccaagtcaggtcagaggtcaaaggtcagcttatt
gacagctcacagaggaaaggggaggagctatacagactgaactgcagcataagctccacc
ctcaccacaaaagccacgccccctttgacctccgcaatatctccttacccctcggtgacc
tctgtaactgtgggtgaccggcagtccgagctgacctctgaagcctccagcagtgagcaa
aaccagggactttcttggagggacattgggggaaacaagctctcgtctgggggctcggag
ctggattgtgcccctgagagcctccagagtcaactcacggaaccagcactcacctcaggt
caggtgacagggaacaacaacaccacctttatctctagtggtcaggtgatgaacttcaac
gctgacgtcatcgtcgtctacgtcagccagacgtctctaggcaacgagggggaggggcca
gacgatgcgttcggaagccccgttcaggaacaggccaatgagagagctccgatgttccag
agttccatctcctccaaaagtgtcagccattcgtcagtggcgtcctcagtaaactccatt
acccataaccccctacggcaggaggacaacctgccggttcaggaagtgactgatcagtgg
ccgagagagaattga
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